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Spg026914 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026914
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationscaffold13:23552823..23563178
RNA-Seq ExpressionSpg026914
SyntenySpg026914
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016442 - RISC complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046978.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]1.2e-2251.06Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

KAA0059771.1 uncharacterized protein E6C27_scaffold108G00260 [Cucumis melo var. makuwa]9.8e-2258.33Show/hide
Query:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR
        RL D+  +Q P    KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRR
Subjt:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR

Query:  LASGEGSSSNVERTPEQSNN
        L+  E ++SN+ER+ EQSN+
Subjt:  LASGEGSSSNVERTPEQSNN

TYJ99784.1 uncharacterized protein E5676_scaffold896G00240 [Cucumis melo var. makuwa]9.8e-2258.33Show/hide
Query:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR
        RL D+  +Q P    KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRR
Subjt:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR

Query:  LASGEGSSSNVERTPEQSNN
        L+  E ++SN+ER+ EQSN+
Subjt:  LASGEGSSSNVERTPEQSNN

TYK04806.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]1.2e-2251.06Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

TYK21104.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]3.4e-2250.35Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L ++EIC++VLG R GHVKG GWGPRP+NA+N+   +  +K   AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+E++ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

TrEMBL top hitse value%identityAlignment
A0A5A7TVR8 Formin-like protein 4 isoform X25.6e-2351.06Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

A0A5A7V207 Uncharacterized protein4.7e-2258.33Show/hide
Query:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR
        RL D+  +Q P    KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRR
Subjt:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR

Query:  LASGEGSSSNVERTPEQSNN
        L+  E ++SN+ER+ EQSN+
Subjt:  LASGEGSSSNVERTPEQSNN

A0A5D3BL79 Uncharacterized protein4.7e-2258.33Show/hide
Query:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR
        RL D+  +Q P    KDEMV LKT SSQ+G E L ++EIC++VL  R GHVKG GWGPRP+NA+N+   +  +K   AQ+A LQSIVESQQATIE ILRR
Subjt:  RLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRR

Query:  LASGEGSSSNVERTPEQSNN
        L+  E ++SN+ER+ EQSN+
Subjt:  LASGEGSSSNVERTPEQSNN

A0A5D3C2Z5 Formin-like protein 4 isoform X25.6e-2351.06Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L +++IC++VLG R GHVKG GWGPRP+NA+N+   +   KA  AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+ER+ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

A0A5D3DBZ5 Formin-like protein 4 isoform X21.6e-2250.35Show/hide
Query:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ
        +E+G++  E+     EL +L    ++ G     +   DEMV LKT SSQ+G E L ++EIC++VLG R GHVKG GWGPRP+NA+N+   +  +K   AQ
Subjt:  REQGQQKGEVSPYLAELLRLEDQAKQQG---PGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGHVKGLGWGPRPRNAKNDHASYQKSKATEAQ

Query:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN
        +A LQSIVESQQATIE ILRRL+  E ++SN+E++ EQSN+
Subjt:  VAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNN

SwissProt top hitse value%identityAlignment
Q8VZG7 Ribonuclease TUDOR 11.7e-0560.87Show/hide
Query:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK
        K+VV+   A+VRE GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK

Q9FLT0 Ribonuclease TUDOR 28.6e-0558.7Show/hide
Query:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK
        K+VV+   A+VR  GQQ + +VSPY+AEL +LE+QA+Q+G GRWSK
Subjt:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK

Arabidopsis top hitse value%identityAlignment
AT5G07350.1 TUDOR-SN protein 11.2e-0660.87Show/hide
Query:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK
        K+VV+   A+VRE GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK

AT5G07350.2 TUDOR-SN protein 11.2e-0660.87Show/hide
Query:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK
        K+VV+   A+VRE GQQ + +VSPY+ ELL+LE+ AKQ+G GRWSK
Subjt:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK

AT5G61780.1 TUDOR-SN protein 26.1e-0658.7Show/hide
Query:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK
        K+VV+   A+VR  GQQ + +VSPY+AEL +LE+QA+Q+G GRWSK
Subjt:  KVVVEAPVAEVREQGQQ-KGEVSPYLAELLRLEDQAKQQGPGRWSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGATATTGAGCCCGAGGCTATATGGTACCATGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAG
CTCCAGTTTAGTACGTTTATCAGGTTCAATGAAGCAAGAGGGTCAACGGGTATCGTTAGAGGAGGACTATGTTCGTTGGCTTCACGCCATCTTCCAGACTAAGCTACACG
TGGTCCGGGAGGGGCTCATCGCCGCCCCTTTTCCATCTCTCACCCGATTGAAGGTTGCCGGCGAAGCTCTAGTCAGTGAGGTCGCCGTCGAAGCTCCGGTCACTGAGGTC
GCCGTTGAAGCTCAGGTTTTTTCCCTTTTCCCTCTTCTATTTTCAGCCATCGCCCCAACCCACTTTCACTCGATTGTAACCCTCACTCGATTGAAGGTGGTCGTCGAAGC
TCCCGTGGCTGAGGTAAGGGAGCAAGGTCAGCAGAAGGGTGAAGTGAGTCCTTACCTTGCAGAACTACTACGTCTTGAAGACCAAGCAAAGCAACAAGGTCCTGGGCGTT
GGAGCAAGGACGAAATGGTGGCATTAAAAACTGCTTCATCACAAGACGGCGGTGAAACTCTTCAGGACAAAGAGATATGTGAACAAGTACTAGGCACGCGACCTGGGCAT
GTGAAGGGCCTTGGTTGGGGACCGAGACCAAGAAATGCTAAGAATGATCATGCAAGCTACCAAAAATCTAAAGCGACAGAGGCTCAAGTTGCTCAATTGCAAAGTATAGT
TGAATCACAACAAGCGACAATTGAAGAAATTTTAAGAAGGTTGGCAAGTGGAGAAGGTTCATCGTCGAATGTGGAAAGGACTCCAGAACAGTCAAATAATGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGATATTGAGCCCGAGGCTATATGGTACCATGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAG
CTCCAGTTTAGTACGTTTATCAGGTTCAATGAAGCAAGAGGGTCAACGGGTATCGTTAGAGGAGGACTATGTTCGTTGGCTTCACGCCATCTTCCAGACTAAGCTACACG
TGGTCCGGGAGGGGCTCATCGCCGCCCCTTTTCCATCTCTCACCCGATTGAAGGTTGCCGGCGAAGCTCTAGTCAGTGAGGTCGCCGTCGAAGCTCCGGTCACTGAGGTC
GCCGTTGAAGCTCAGGTTTTTTCCCTTTTCCCTCTTCTATTTTCAGCCATCGCCCCAACCCACTTTCACTCGATTGTAACCCTCACTCGATTGAAGGTGGTCGTCGAAGC
TCCCGTGGCTGAGGTAAGGGAGCAAGGTCAGCAGAAGGGTGAAGTGAGTCCTTACCTTGCAGAACTACTACGTCTTGAAGACCAAGCAAAGCAACAAGGTCCTGGGCGTT
GGAGCAAGGACGAAATGGTGGCATTAAAAACTGCTTCATCACAAGACGGCGGTGAAACTCTTCAGGACAAAGAGATATGTGAACAAGTACTAGGCACGCGACCTGGGCAT
GTGAAGGGCCTTGGTTGGGGACCGAGACCAAGAAATGCTAAGAATGATCATGCAAGCTACCAAAAATCTAAAGCGACAGAGGCTCAAGTTGCTCAATTGCAAAGTATAGT
TGAATCACAACAAGCGACAATTGAAGAAATTTTAAGAAGGTTGGCAAGTGGAGAAGGTTCATCGTCGAATGTGGAAAGGACTCCAGAACAGTCAAATAATGAAAATTAA
Protein sequenceShow/hide protein sequence
MTKILSPRLYGTMCTQVEIELPVPDTLPTSAESSRTSSSLVRLSGSMKQEGQRVSLEEDYVRWLHAIFQTKLHVVREGLIAAPFPSLTRLKVAGEALVSEVAVEAPVTEV
AVEAQVFSLFPLLFSAIAPTHFHSIVTLTRLKVVVEAPVAEVREQGQQKGEVSPYLAELLRLEDQAKQQGPGRWSKDEMVALKTASSQDGGETLQDKEICEQVLGTRPGH
VKGLGWGPRPRNAKNDHASYQKSKATEAQVAQLQSIVESQQATIEEILRRLASGEGSSSNVERTPEQSNNEN