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Spg026926 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026926
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationscaffold13:26515585..26520282
RNA-Seq ExpressionSpg026926
SyntenySpg026926
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]1.0e-2356.19Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ KCD+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]2.5e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]2.5e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]1.0e-2356.19Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ KCD+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]1.8e-2360Show/hide
Query:  SLSTNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDE
        S  TN+V+LK+ L SI KKPGES + Y+Q IKELKDKLANV V  D EDL+IY LN LP +F+ F T++ TRS  +SFEEL+VLL+ EEA + KQ K DE
Subjt:  SLSTNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDE

Query:  SFMQRITLTA
         F+Q  TL A
Subjt:  SFMQRITLTA

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X21.2e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X31.2e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X11.2e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

A0A5D3CLI6 T4.51.2e-2255.24Show/hide
Query:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM
        +N+V+LK++L +I KKP ES + YI+ IKE+KDKLANV    + EDL+IYALN LP +++TF+T++ TRS P++FEELHVLL +EE+ L KQ K D+S+ 
Subjt:  TNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFM

Query:  QRITL
        Q   L
Subjt:  QRITL

A0A6J1DYF1 uncharacterized protein LOC1110257098.5e-2460Show/hide
Query:  SLSTNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDE
        S  TN+V+LK+ L SI KKPGES + Y+Q IKELKDKLANV V  D EDL+IY LN LP +F+ F T++ TRS  +SFEEL+VLL+ EEA + KQ K DE
Subjt:  SLSTNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDE

Query:  SFMQRITLTA
         F+Q  TL A
Subjt:  SFMQRITLTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTACATGGACGCCTTGGATTAATACGTTTGTATCGAATATAAAGCGGGCCGTATCACATAGTGTTACCAGGATAAGACTCCCACAAGTCGTTCTCGGCCCGGA
GAATAGTAGAGAAGGCTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACATCACAAGGAGTTCCTCTCAAGTGAGCTACAAAGAGCCCAGCCAACATTCTCGCTTG
CACATCATCATCTTCGTTCGAAGCGTCTTAACACTGCACCTGGCGTCTCAACATTACCTGCTTCCACGCGTTTTCAACATCTTTTCGTTCGTAAGCGTCTTAACGCTGCT
TGTAGCTTATCAACCAATATCGTTAGCTTGAAAACTGAATTGTCGTCGATTATCAAGAAACCTGGTGAATCTGACAATCAGTACATTCAACACATCAAAGAACTGAAAGA
TAAGCTTGCTAATGTCTTGGTCACTAATGATACTGAAGATCTCATCATTTACGCCCTCAATGATCTTCCTTTTGATTTCAGTACATTCAAGACCACTATACACACAAGAT
CGCACCCGATTTCGTTTGAAGAACTTCATGTTCTTCTTCTATCTGAAGAGGCTCTTCTTGGAAAACAGATCAAGTGTGATGAATCTTTTATGCAACGGATTACCCTAACT
GCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTACATGGACGCCTTGGATTAATACGTTTGTATCGAATATAAAGCGGGCCGTATCACATAGTGTTACCAGGATAAGACTCCCACAAGTCGTTCTCGGCCCGGA
GAATAGTAGAGAAGGCTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACATCACAAGGAGTTCCTCTCAAGTGAGCTACAAAGAGCCCAGCCAACATTCTCGCTTG
CACATCATCATCTTCGTTCGAAGCGTCTTAACACTGCACCTGGCGTCTCAACATTACCTGCTTCCACGCGTTTTCAACATCTTTTCGTTCGTAAGCGTCTTAACGCTGCT
TGTAGCTTATCAACCAATATCGTTAGCTTGAAAACTGAATTGTCGTCGATTATCAAGAAACCTGGTGAATCTGACAATCAGTACATTCAACACATCAAAGAACTGAAAGA
TAAGCTTGCTAATGTCTTGGTCACTAATGATACTGAAGATCTCATCATTTACGCCCTCAATGATCTTCCTTTTGATTTCAGTACATTCAAGACCACTATACACACAAGAT
CGCACCCGATTTCGTTTGAAGAACTTCATGTTCTTCTTCTATCTGAAGAGGCTCTTCTTGGAAAACAGATCAAGTGTGATGAATCTTTTATGCAACGGATTACCCTAACT
GCTTAA
Protein sequenceShow/hide protein sequence
MSPTWTPWINTFVSNIKRAVSHSVTRIRLPQVVLGPENSREGSKGCPREVGEGKHHKEFLSSELQRAQPTFSLAHHHLRSKRLNTAPGVSTLPASTRFQHLFVRKRLNAA
CSLSTNIVSLKTELSSIIKKPGESDNQYIQHIKELKDKLANVLVTNDTEDLIIYALNDLPFDFSTFKTTIHTRSHPISFEELHVLLLSEEALLGKQIKCDESFMQRITLT
A