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Spg026938 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026938
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold13:26403077..26404597
RNA-Seq ExpressionSpg026938
SyntenySpg026938
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037514.1 reverse transcriptase [Cucumis melo var. makuwa]8.6e-0667.44Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEA  G VG +IQ+PTT MK  PRGNR  LQTREL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
KAA0045180.1 uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]2.3e-0669.77Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEALF MVG +IQ+PTT+MK  PRGNR  LQT EL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.9e-0568.29Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
        QVESEALFGMV  +IQ+PTT M  WPRGNR   QT +L KT
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
TYK01989.1 reverse transcriptase [Cucumis melo var. makuwa]8.6e-0667.44Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEA  G VG +IQ+PTT MK  PRGNR  LQTREL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
TrEMBL top hitse value%identityAlignment
A0A5A7T223 Reverse transcriptase4.2e-0667.44Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEA  G VG +IQ+PTT MK  PRGNR  LQTREL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
A0A5A7TPS6 Retrotrans_gag domain-containing protein1.1e-0669.77Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEALF MVG +IQ+PTT+MK  PRGNR  LQT EL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
A0A5D3BC77 CCHC-type domain-containing protein6.7e-0457.14Show/hide
Query:  VFRAFWGVQVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
        VF      QVESEA+FG+V  +IQ+PTT MK  P GNR  LQ  EL KT
Subjt:  VFRAFWGVQVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
A0A5D3BET3 Uncharacterized protein9.3e-0668.29Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
        QVESEALFGMV  +IQ+PTT M  WPRGNR   QT +L KT
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKT
A0A5D3BV68 Reverse transcriptase4.2e-0667.44Show/hide
Query:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
        QVESEA  G VG +IQ+PTT MK  PRGNR  LQTREL KT +
Subjt:  QVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGC
TCTATTTGGTATGGTTGGAAATATTATTCAATTTCCTACAACTTTAATGAAGAATTGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTACAG
TGAAGTGGTGGCACGTCGAGTGTCGCCCATTGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGGTCGAGGAGGACGATGCATCATCCAACACACCAAGAT
GAGTGGGCATTGATGTCACAAGAAGGCATGAGCATATTGAGAAGCAACAGCGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCGTGTGGCCT
AAGTGAGCTACCCCATGGCACATGGGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTCGGGC
GACACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGC
TCTATTTGGTATGGTTGGAAATATTATTCAATTTCCTACAACTTTAATGAAGAATTGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTACAG
TGAAGTGGTGGCACGTCGAGTGTCGCCCATTGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGGTCGAGGAGGACGATGCATCATCCAACACACCAAGAT
GAGTGGGCATTGATGTCACAAGAAGGCATGAGCATATTGAGAAGCAACAGCGTCGTCAGACGCGGGGAGGCATGGTGTCAGCTCTCCACCACCCCTGGGCCGTGTGGCCT
AAGTGAGCTACCCCATGGCACATGGGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTCGGGC
GACACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLWFSLVFRAFWGVQVESEALFGMVGNIIQFPTTLMKNWPRGNRSGLQTRELAKTTVKWWHVECRPLGHVRGPRERSAMMRSRRTMHHPTHQD
EWALMSQEGMSILRSNSVVRRGEAWCQLSTTPGPCGLSELPHGTWVCHGVGERCKTSVLGVFLWEWVSKDSVGRHGCADIAPPPMG