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Spg026944 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026944
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUPF0481 protein At3g47200-like
Genome locationscaffold13:25134542..25138477
RNA-Seq ExpressionSpg026944
SyntenySpg026944
Gene Ontology termsNA
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064930.1 UPF0481 protein [Cucumis melo var. makuwa]1.1e-1952.63Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E   ++DA+EVNHLVDFLRIHLT P R     LD        S WP +A ELHDCGISF  +         +CMM+V F++R GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

XP_004138858.1 UPF0481 protein At3g47200 [Cucumis sativus]8.8e-2051.75Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E  F++DAS VNHLVDFLRIHLT P                 S WP +A ELH+CGISF  +         KCMM+V FK+R+GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

XP_008445209.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]1.1e-1952.63Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E   ++DA+EVNHLVDFLRIHLT P R     LD        S WP +A ELHDCGISF  +         +CMM+V F++R GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

XP_022131636.1 UPF0481 protein At3g47200-like [Momordica charantia]4.0e-1239.13Show/hide
Query:  REGLSYFEREFEV--DASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEI
        REG+ Y  ++F V  D  EV HL+ FL  ++  P    +     DGT  + S+WPP+A EL+D GISFE   KSHY  +        F +R G+L++P I
Subjt:  REGLSYFEREFEV--DASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEI

Query:  IIDDSFEISLRKLMS
        II+++FE ++R +++
Subjt:  IIDDSFEISLRKLMS

XP_022132033.1 UPF0481 protein At3g47200-like [Momordica charantia]1.4e-0938.66Show/hide
Query:  AREGLSYFEREFEV---DASEVNHLVDFLRIHLTHPWRASELILDHD--GTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLK
        AREG+ Y  ++F V   D  EVNH V FL  ++          LDH         +IWPP+A EL+D GISFE   KSHY  +        F +R G+L+
Subjt:  AREGLSYFEREFEV---DASEVNHLVDFLRIHLTHPWRASELILDHD--GTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLK

Query:  IPEIIIDDSFEISLRKLMS
        +P III+++FE  +R +++
Subjt:  IPEIIIDDSFEISLRKLMS

TrEMBL top hitse value%identityAlignment
A0A0A0LPK8 Uncharacterized protein4.3e-2051.75Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E  F++DAS VNHLVDFLRIHLT P                 S WP +A ELH+CGISF  +         KCMM+V FK+R+GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

A0A1S3BD00 UPF0481 protein At3g47200-like5.6e-2052.63Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E   ++DA+EVNHLVDFLRIHLT P R     LD        S WP +A ELHDCGISF  +         +CMM+V F++R GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

A0A5A7VCL1 UPF0481 protein5.6e-2052.63Show/hide
Query:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII
        REG+SY  E   ++DA+EVNHLVDFLRIHLT P R     LD        S WP +A ELHDCGISF  +         +CMM+V F++R GVLK+P+II
Subjt:  REGLSYF-EREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEII

Query:  IDDSFEISLRKLMS
        IDDSFEI  R +++
Subjt:  IDDSFEISLRKLMS

A0A6J1BQ21 UPF0481 protein At3g47200-like1.9e-1239.13Show/hide
Query:  REGLSYFEREFEV--DASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEI
        REG+ Y  ++F V  D  EV HL+ FL  ++  P    +     DGT  + S+WPP+A EL+D GISFE   KSHY  +        F +R G+L++P I
Subjt:  REGLSYFEREFEV--DASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEI

Query:  IIDDSFEISLRKLMS
        II+++FE ++R +++
Subjt:  IIDDSFEISLRKLMS

A0A6J1BR42 UPF0481 protein At3g47200-like6.8e-1038.66Show/hide
Query:  AREGLSYFEREFEV---DASEVNHLVDFLRIHLTHPWRASELILDHD--GTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLK
        AREG+ Y  ++F V   D  EVNH V FL  ++          LDH         +IWPP+A EL+D GISFE   KSHY  +        F +R G+L+
Subjt:  AREGLSYFEREFEV---DASEVNHLVDFLRIHLTHPWRASELILDHD--GTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLK

Query:  IPEIIIDDSFEISLRKLMS
        +P III+++FE  +R +++
Subjt:  IPEIIIDDSFEISLRKLMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGAGGTCGACCTCATCCTCTTAGGGTTTTTAAGAATCCGGAGGTGTTTCGGGACGAACCAGGCAAAACCGGGGCGGTCATAGACATTAGGGACCGAAGGGAGGT
GGCCAAGCCTGGCCCGTGCCCGCGGGCCGAATGGTCGGGCCAGATTGGCCCGACCCTTTGGTCCGGTCTTCCTCTGGGTCGGCTTTTTGGTCACACCTCTGCCCAACTGT
CCTTGGCAGCTCCTTGTGCGTCAGTGTGGGTTCCCATGGCTTTACGCAGCGTGAACCCAAAAGCTTATACTCCTCAAGTCATTTCCATCGGCCTTTTCATCACGCTGAAA
ATAACAATAACCCGATGGGCTCGTGAAGGGTTGAGTTATTTTGAAAGAGAGTTTGAAGTAGACGCCAGTGAAGTGAATCATCTCGTTGATTTTCTAAGAATACACTTGAC
TCACCCATGGCGTGCTTCAGAATTAATCTTGGACCACGATGGCACGTCCTCACTATTCTCGATCTGGCCGCCTAGTGCCATAGAGCTTCACGATTGTGGCATCTCTTTCG
AGGCCAAGAACAAATCCCATTATTATCCTCGAGGGAAATGCATGATGGACGTGTATTTCAAAAAACGTAAAGGTGTTCTCAAAATCCCAGAAATCATAATAGACGACAGT
TTCGAAATCAGTCTAAGAAAGCTTATGAGCACTGCCACCAACCCCCCCTCGTGCGTTTCTTTAGCAGCCGCCCCCTCCCCTTCAGTTCCTTCTTCTCGTGCAGCCAAGCC
CGAAGCCGCATCTCTCCCCCTCTCTGCCGTTGTTGCGCCGCCGCCAGTAGCCAAGCCGCGAGTTTCCTCTTCCCCCTCGCGTGTTCGTTCGGCTGGAGCAGCAAGACCCA
CGCAGATCTCCATCTCAGGCCTCTTTCTCCCTCTTCGCGTGAGCAGTCGTGGTTCCTGTCGTCGATCTCTCTCTCTCTCGTTCCTCCCTCGATTTGTCAGTCGCCAGCCG
TGGGTCCCTTCAAGTTCTTCCTCGCACGCCGCCGTCCCATCTCCGTTTCTCCATTCTCGGTCTTCTTCGGCGGCGAACTCGAGGCATGAAATTAACAGCAAATCGAAAGC
GTTGAGCGGCGAGCAATGGCGTTTAGGCGCGATTTTCCCTTTTTGCTTGGCTTCAATCCGTGAGTTGCAGCACGAATCTTCTCCTCTTTGGCATTCCGGTAAGTTTGGCG
TAAGACCCACTCGATCTCTTCAAGTTTTAGCTTGTGCCCATATAGTTTTGAACTTCAAAATTGTCCTGGATCATGACCCATGCTTGTTGGAGTTCGGTTATGGTTTACCC
ATTCGTTATTGGCTTCGAAATTGCAGGATTAAGCCTCGTTTATCGGCTGTCCATCGACCAATTGGGCCTAGTGAGGGCTTTGGAGGATTACCCACAAGCCGATCGACCTT
GAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGAGGTCGACCTCATCCTCTTAGGGTTTTTAAGAATCCGGAGGTGTTTCGGGACGAACCAGGCAAAACCGGGGCGGTCATAGACATTAGGGACCGAAGGGAGGT
GGCCAAGCCTGGCCCGTGCCCGCGGGCCGAATGGTCGGGCCAGATTGGCCCGACCCTTTGGTCCGGTCTTCCTCTGGGTCGGCTTTTTGGTCACACCTCTGCCCAACTGT
CCTTGGCAGCTCCTTGTGCGTCAGTGTGGGTTCCCATGGCTTTACGCAGCGTGAACCCAAAAGCTTATACTCCTCAAGTCATTTCCATCGGCCTTTTCATCACGCTGAAA
ATAACAATAACCCGATGGGCTCGTGAAGGGTTGAGTTATTTTGAAAGAGAGTTTGAAGTAGACGCCAGTGAAGTGAATCATCTCGTTGATTTTCTAAGAATACACTTGAC
TCACCCATGGCGTGCTTCAGAATTAATCTTGGACCACGATGGCACGTCCTCACTATTCTCGATCTGGCCGCCTAGTGCCATAGAGCTTCACGATTGTGGCATCTCTTTCG
AGGCCAAGAACAAATCCCATTATTATCCTCGAGGGAAATGCATGATGGACGTGTATTTCAAAAAACGTAAAGGTGTTCTCAAAATCCCAGAAATCATAATAGACGACAGT
TTCGAAATCAGTCTAAGAAAGCTTATGAGCACTGCCACCAACCCCCCCTCGTGCGTTTCTTTAGCAGCCGCCCCCTCCCCTTCAGTTCCTTCTTCTCGTGCAGCCAAGCC
CGAAGCCGCATCTCTCCCCCTCTCTGCCGTTGTTGCGCCGCCGCCAGTAGCCAAGCCGCGAGTTTCCTCTTCCCCCTCGCGTGTTCGTTCGGCTGGAGCAGCAAGACCCA
CGCAGATCTCCATCTCAGGCCTCTTTCTCCCTCTTCGCGTGAGCAGTCGTGGTTCCTGTCGTCGATCTCTCTCTCTCTCGTTCCTCCCTCGATTTGTCAGTCGCCAGCCG
TGGGTCCCTTCAAGTTCTTCCTCGCACGCCGCCGTCCCATCTCCGTTTCTCCATTCTCGGTCTTCTTCGGCGGCGAACTCGAGGCATGAAATTAACAGCAAATCGAAAGC
GTTGAGCGGCGAGCAATGGCGTTTAGGCGCGATTTTCCCTTTTTGCTTGGCTTCAATCCGTGAGTTGCAGCACGAATCTTCTCCTCTTTGGCATTCCGGTAAGTTTGGCG
TAAGACCCACTCGATCTCTTCAAGTTTTAGCTTGTGCCCATATAGTTTTGAACTTCAAAATTGTCCTGGATCATGACCCATGCTTGTTGGAGTTCGGTTATGGTTTACCC
ATTCGTTATTGGCTTCGAAATTGCAGGATTAAGCCTCGTTTATCGGCTGTCCATCGACCAATTGGGCCTAGTGAGGGCTTTGGAGGATTACCCACAAGCCGATCGACCTT
GAACTAG
Protein sequenceShow/hide protein sequence
MGRGRPHPLRVFKNPEVFRDEPGKTGAVIDIRDRREVAKPGPCPRAEWSGQIGPTLWSGLPLGRLFGHTSAQLSLAAPCASVWVPMALRSVNPKAYTPQVISIGLFITLK
ITITRWAREGLSYFEREFEVDASEVNHLVDFLRIHLTHPWRASELILDHDGTSSLFSIWPPSAIELHDCGISFEAKNKSHYYPRGKCMMDVYFKKRKGVLKIPEIIIDDS
FEISLRKLMSTATNPPSCVSLAAAPSPSVPSSRAAKPEAASLPLSAVVAPPPVAKPRVSSSPSRVRSAGAARPTQISISGLFLPLRVSSRGSCRRSLSLSFLPRFVSRQP
WVPSSSSSHAAVPSPFLHSRSSSAANSRHEINSKSKALSGEQWRLGAIFPFCLASIRELQHESSPLWHSGKFGVRPTRSLQVLACAHIVLNFKIVLDHDPCLLEFGYGLP
IRYWLRNCRIKPRLSAVHRPIGPSEGFGGLPTSRSTLN