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Spg026966 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026966
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold7:30079375..30083888
RNA-Seq ExpressionSpg026966
SyntenySpg026966
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]2.3e-1246.49Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELY---ILAYLYCKC---FCKDWIIYDF
        +LFGLSY +  KRP+GNR SLQT +L KT                 VEI+LPVPDTLPTSA S RS+SNTW+ELY   I   +YCK      ++ +   F
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELY---ILAYLYCKC---FCKDWIIYDF

Query:  CSAIQQGQQVSLEE
         S+ +  QQ  LE+
Subjt:  CSAIQQGQQVSLEE

KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.1e-1251.02Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYI-------LAYLYCKCFCKDWIIYDFCSAIQQGQQVSLEE
        +LF LSY +  KRPRGNR SLQT KL KTVEI+LP+PDTLPT A S  S+S+TW+ELY        L Y   +      ++Y     + +GQQ SLEE
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYI-------LAYLYCKCFCKDWIIYDFCSAIQQGQQVSLEE

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.5e-1441.73Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQ
        +LFGL Y +  KRPRGNR+SLQT +L KT                 VEI+LPVPDTLPTSA SS S+S+TW+EL          F    I Y F + +  
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQ

Query:  GQQV----------SLEEDDVCWLHAISLTKLAGARGVG
        G  +           +  D+VCWLHA+   K AG  G G
Subjt:  GQQV----------SLEEDDVCWLHAISLTKLAGARGVG

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]5.4e-1736.02Show/hide
Query:  MAEYGFNLPISGILFGLSYTDRIK----------------------RPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCK
        +AE G N     +LFGLSY + ++                       PRGNR +L T KL KTVEI+LPVPDTLPTSA SS+S+S+TW+ELY  +     
Subjt:  MAEYGFNLPISGILFGLSYTDRIK----------------------RPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCK

Query:  CFCKDWIIYDFCSAIQQGQQVSLEEDDVCWLHAISLTKLAGARGVG---GRVVESERNLEVGQQLLISSYPQRLKAELLNWSEVGN
         F K   +        +G    +  DD+CWLHA+   K AG+ G G    R     R  + G Q       +R  +     +EVG+
Subjt:  CFCKDWIIYDFCSAIQQGQQVSLEEDDVCWLHAISLTKLAGARGVG---GRVVESERNLEVGQQLLISSYPQRLKAELLNWSEVGN

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]2.3e-1241.54Show/hide
Query:  LSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQGQQV
        +S  + ++ PRGNRSSLQT +L KT                 VEI+LPVPDTLPTSA S  S+S+TW+ELY         F K   +        +G   
Subjt:  LSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQGQQV

Query:  SLEEDDVCWLHAISLTKLAGARGVGGRVVE
         +  DDVCWLH +   K+AG  G GG V E
Subjt:  SLEEDDVCWLHAISLTKLAGARGVGGRVVE

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein5.1e-1351.02Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYI-------LAYLYCKCFCKDWIIYDFCSAIQQGQQVSLEE
        +LF LSY +  KRPRGNR SLQT KL KTVEI+LP+PDTLPT A S  S+S+TW+ELY        L Y   +      ++Y     + +GQQ SLEE
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYI-------LAYLYCKCFCKDWIIYDFCSAIQQGQQVSLEE

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.2e-1441.73Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQ
        +LFGL Y +  KRPRGNR+SLQT +L KT                 VEI+LPVPDTLPTSA SS S+S+TW+EL          F    I Y F + +  
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQ

Query:  GQQV----------SLEEDDVCWLHAISLTKLAGARGVG
        G  +           +  D+VCWLHA+   K AG  G G
Subjt:  GQQV----------SLEEDDVCWLHAISLTKLAGARGVG

A0A5A7UAH6 CCHC-type domain-containing protein2.6e-1736.02Show/hide
Query:  MAEYGFNLPISGILFGLSYTDRIK----------------------RPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCK
        +AE G N     +LFGLSY + ++                       PRGNR +L T KL KTVEI+LPVPDTLPTSA SS+S+S+TW+ELY  +     
Subjt:  MAEYGFNLPISGILFGLSYTDRIK----------------------RPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCK

Query:  CFCKDWIIYDFCSAIQQGQQVSLEEDDVCWLHAISLTKLAGARGVG---GRVVESERNLEVGQQLLISSYPQRLKAELLNWSEVGN
         F K   +        +G    +  DD+CWLHA+   K AG+ G G    R     R  + G Q       +R  +     +EVG+
Subjt:  CFCKDWIIYDFCSAIQQGQQVSLEEDDVCWLHAISLTKLAGARGVG---GRVVESERNLEVGQQLLISSYPQRLKAELLNWSEVGN

A0A5A7VIY9 Uncharacterized protein1.1e-1241.54Show/hide
Query:  LSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQGQQV
        +S  + ++ PRGNRSSLQT +L KT                 VEI+LPVPDTLPTSA S  S+S+TW+ELY         F K   +        +G   
Subjt:  LSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQGQQV

Query:  SLEEDDVCWLHAISLTKLAGARGVGGRVVE
         +  DDVCWLH +   K+AG  G GG V E
Subjt:  SLEEDDVCWLHAISLTKLAGARGVGGRVVE

A0A5D3DIM8 Uncharacterized protein1.1e-1246.49Show/hide
Query:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELY---ILAYLYCKC---FCKDWIIYDF
        +LFGLSY +  KRP+GNR SLQT +L KT                 VEI+LPVPDTLPTSA S RS+SNTW+ELY   I   +YCK      ++ +   F
Subjt:  ILFGLSYTDRIKRPRGNRSSLQTRKLAKT-----------------VEIKLPVPDTLPTSAGSSRSSSNTWVELY---ILAYLYCKC---FCKDWIIYDF

Query:  CSAIQQGQQVSLEE
         S+ +  QQ  LE+
Subjt:  CSAIQQGQQVSLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATATGGGTTCAACCTGCCTATCTCTGGTATTTTATTCGGTTTGAGCTACACAGATAGAATTAAGAGGCCGAGAGGAAATAGGTCGAGTCTACAGACCAGGAA
ACTAGCTAAGACAGTAGAGATCAAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGGAAGTTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTACATTTTAGCCT
ATCTATATTGTAAATGCTTTTGTAAGGATTGGATAATTTACGATTTCTGTTCAGCGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCAC
GCCATCTCCTTGACTAAACTAGCAGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAACTATTGATTTCTAGTTACCCACA
ACGTTTGAAGGCCGAATTGTTGAACTGGAGCGAAGTTGGGAATTGGACAGCAAGCAGTAGCTTCATTTGGGTGAACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCG
AGTCGTTGGGGGATTTTCGATCAAGCGTAGTATCTCAGGTAGAGGCAAAGGTGTACGGAACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATATGGGTTCAACCTGCCTATCTCTGGTATTTTATTCGGTTTGAGCTACACAGATAGAATTAAGAGGCCGAGAGGAAATAGGTCGAGTCTACAGACCAGGAA
ACTAGCTAAGACAGTAGAGATCAAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGGAAGTTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTACATTTTAGCCT
ATCTATATTGTAAATGCTTTTGTAAGGATTGGATAATTTACGATTTCTGTTCAGCGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCAC
GCCATCTCCTTGACTAAACTAGCAGGTGCCCGTGGCGTTGGAGGCCGAGTTGTCGAATCGGAGCGAAACTTGGAAGTTGGACAGCAACTATTGATTTCTAGTTACCCACA
ACGTTTGAAGGCCGAATTGTTGAACTGGAGCGAAGTTGGGAATTGGACAGCAAGCAGTAGCTTCATTTGGGTGAACGAGTATTTCGCATCACGTGGTTGGTGTTGTATCG
AGTCGTTGGGGGATTTTCGATCAAGCGTAGTATCTCAGGTAGAGGCAAAGGTGTACGGAACGCGTGACGGAGAGCTGCTGAGCCATGGATCTCCTTTAGTTTAA
Protein sequenceShow/hide protein sequence
MAEYGFNLPISGILFGLSYTDRIKRPRGNRSSLQTRKLAKTVEIKLPVPDTLPTSAGSSRSSSNTWVELYILAYLYCKCFCKDWIIYDFCSAIQQGQQVSLEEDDVCWLH
AISLTKLAGARGVGGRVVESERNLEVGQQLLISSYPQRLKAELLNWSEVGNWTASSSFIWVNEYFASRGWCCIESLGDFRSSVVSQVEAKVYGTRDGELLSHGSPLV