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Spg026968 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026968
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:29250118..29264547
RNA-Seq ExpressionSpg026968
SyntenySpg026968
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]3.7e-0656.92Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ
        ISIDYMTEIL+ RLYGTVCT                  VEIELPVPD LP SAESS S+SS+  +
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ

KAA0062407.1 uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa]6.3e-0669.77Show/hide
Query:  MTEILNPRLYGTVCTQVEIELPVPDTLPMSAESSRSSSSSMFQ
        MTEIL+ RLYGTVCTQV+IELP+PDTLP SAESS S+ ++  +
Subjt:  MTEILNPRLYGTVCTQVEIELPVPDTLPMSAESSRSSSSSMFQ

TYK11693.1 gag protease polyprotein [Cucumis melo var. makuwa]1.3e-0659.68Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSS
        +SIDY+TEIL+ RLYGTVCTQ                 VEIELPVPDTLP SAESS+S+S S
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSS

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]6.3e-0660.66Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSS
        ISIDYMTEIL+ RLYGTVCT                  VEIELPVPD LP SAESS S+SS
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSS

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-0558.33Show/hide
Query:  MTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ
        MTEIL+PRLYGTVCTQ                 VEIELPVPDTLP SAESS S+SS+  +
Subjt:  MTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ

TrEMBL top hitse value%identityAlignment
A0A5A7THH5 Uncharacterized protein1.8e-0656.92Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ
        ISIDYMTEIL+ RLYGTVCT                  VEIELPVPD LP SAESS S+SS+  +
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ

A0A5A7V638 Uncharacterized protein3.0e-0669.77Show/hide
Query:  MTEILNPRLYGTVCTQVEIELPVPDTLPMSAESSRSSSSSMFQ
        MTEIL+ RLYGTVCTQV+IELP+PDTLP SAESS S+ ++  +
Subjt:  MTEILNPRLYGTVCTQVEIELPVPDTLPMSAESSRSSSSSMFQ

A0A5D3CIF4 Gag protease polyprotein6.1e-0759.68Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSS
        +SIDY+TEIL+ RLYGTVCTQ                 VEIELPVPDTLP SAESS+S+S S
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSS

A0A5D3DE96 Uncharacterized protein3.0e-0660.66Show/hide
Query:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSS
        ISIDYMTEIL+ RLYGTVCT                  VEIELPVPD LP SAESS S+SS
Subjt:  ISIDYMTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSS

A0A5D3DX39 Reverse transcriptase5.2e-0658.33Show/hide
Query:  MTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ
        MTEIL+PRLYGTVCTQ                 VEIELPVPDTLP SAESS S+SS+  +
Subjt:  MTEILNPRLYGTVCTQ-----------------VEIELPVPDTLPMSAESSRSSSSSMFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTGTTTCGAGCATTATGGGGTATTTCTATTGACTACATGAC
TGAGATATTGAACCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAATGTCTGCTGAAAGTTCCAGATCAAGCTCCA
GTTCAATGTTTCAGGAGGGTCAACGGGGTGATCGCTCCCAGGGCGACTCACAGGCAGATCATGGGGATCTCACGATGCAACCTAATGGAGGAGACCGTAGGATACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTGTTTCGAGCATTATGGGGTATTTCTATTGACTACATGAC
TGAGATATTGAACCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAATGTCTGCTGAAAGTTCCAGATCAAGCTCCA
GTTCAATGTTTCAGGAGGGTCAACGGGGTGATCGCTCCCAGGGCGACTCACAGGCAGATCATGGGGATCTCACGATGCAACCTAATGGAGGAGACCGTAGGATACGTTGA
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLWFSLVFRALWGISIDYMTEILNPRLYGTVCTQVEIELPVPDTLPMSAESSRSSSSSMFQEGQRGDRSQGDSQADHGDLTMQPNGGDRRIR