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Spg026996 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg026996
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationscaffold8:3504562..3506295
RNA-Seq ExpressionSpg026996
SyntenySpg026996
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054564.1 uncharacterized protein E6C27_scaffold24G003560 [Cucumis melo var. makuwa]3.9e-1451.22Show/hide
Query:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT
        +NK GFIT+ IKKP+EG     W+CN+D+I SWI+  +SKEI AS+V   SVK VWDEL++ ++QSN   IYQ  +++   T
Subjt:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT

KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.3e-1764.94Show/hide
Query:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE
        RNK GFIT KI+KP++G     W CNNDI+ SWIL  VSKEI ASI+ I S+K +WDELR RFKQSN  SIYQ  KE
Subjt:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]1.2e-1253.25Show/hide
Query:  RNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM
        +NK GFI   IKKP       W+CNNDII SWI+  VSKEI ASI+   S K +WDEL++RF+QS+   I+Q  KE+
Subjt:  RNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM

XP_038888312.1 uncharacterized protein LOC120078158 [Benincasa hispida]3.9e-1452.44Show/hide
Query:  RNKTGFITDKIKKPTEGT----WECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT
        +NK GFIT  I+KP EG+    W CNND+I SWI+  VSKEI  S+V   SVK +WDEL++R+ QSN   IYQ  K++   T
Subjt:  RNKTGFITDKIKKPTEGT----WECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT

XP_038894602.1 uncharacterized protein LOC120083117 [Benincasa hispida]2.5e-1342.7Show/hide
Query:  LESCDENGYLRRNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM
        +E  + +G  R+ +  F+   IKKP EG     W+CNND+I SWI+  +SKEI  S+V   +VK +WDEL++R++QSN   +YQ  K++
Subjt:  LESCDENGYLRRNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM

TrEMBL top hitse value%identityAlignment
A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 86.2e-1864.94Show/hide
Query:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE
        RNK GFIT KI+KP++G     W CNNDI+ SWIL  VSKEI ASI+ I S+K +WDELR RFKQSN  SIYQ  KE
Subjt:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE

A0A5D3D9Z1 Retrotrans_gag domain-containing protein1.9e-1451.22Show/hide
Query:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT
        +NK GFIT+ IKKP+EG     W+CN+D+I SWI+  +SKEI AS+V   SVK VWDEL++ ++QSN   IYQ  +++   T
Subjt:  RNKTGFITDKIKKPTEG----TWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEMTDWT

A0A5D3DEP5 Putative glycosyltransferase2.8e-1058.9Show/hide
Query:  RNKTGFITDKIKKPTE----GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQ
        RNK  FIT KI+KP        W CN DII SWIL  VSKEI ASIV   SVK +W+EL   FKQ N  SIYQ
Subjt:  RNKTGFITDKIKKPTE----GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQ

A0A6J1CXR2 uncharacterized protein LOC1110152396.0e-1353.25Show/hide
Query:  RNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM
        +NK GFI   IKKP       W+CNNDII SWI+  VSKEI ASI+   S K +WDEL++RF+QS+   I+Q  KE+
Subjt:  RNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKEM

A0A6J1DPT8 uncharacterized protein LOC1110224202.1e-1042.53Show/hide
Query:  LESCDENGYLRRNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE
        +ESC+ N    + +       I KP +     W+CNND+I+ WI+  VS++I AS+V   S   +W+ELRDRF+QSN   IYQ  KE
Subjt:  LESCDENGYLRRNKTGFITDKIKKPTE---GTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVWDELRDRFKQSNDHSIYQFHKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGACAGGGAGTCTAGAAGGATTGATCCTGTTATGGCAATTGAAAGCAAAATTGAATCCCTATTTTTTACACAATTCTTTTTTTGTTATTCTTCTATTTTAGTTTC
TGTATCTTCTTGGCACGATCAACTACACTTCTTAGAGTCGTGCGATGAAAATGGTTATCTTCGGAGAAACAAGACTGGTTTTATCACCGACAAGATTAAGAAACCAACTG
AAGGAACCTGGGAATGCAACAATGATATCATTGTATCTTGGATCCTTAAGTTGGTTTCTAAAGAGATTGTTGCTAGCATCGTCGACATTAGATCTGTTAAAGTTGTTTGG
GACGAATTACGTGATCGCTTCAAGCAATCCAATGACCATAGCATTTATCAGTTTCACAAGGAAATGACTGATTGGACCTTGGAGGACCCTTTGGCAGCTTCTCATTGGCT
GGATTTTGCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGACAGGGAGTCTAGAAGGATTGATCCTGTTATGGCAATTGAAAGCAAAATTGAATCCCTATTTTTTACACAATTCTTTTTTTGTTATTCTTCTATTTTAGTTTC
TGTATCTTCTTGGCACGATCAACTACACTTCTTAGAGTCGTGCGATGAAAATGGTTATCTTCGGAGAAACAAGACTGGTTTTATCACCGACAAGATTAAGAAACCAACTG
AAGGAACCTGGGAATGCAACAATGATATCATTGTATCTTGGATCCTTAAGTTGGTTTCTAAAGAGATTGTTGCTAGCATCGTCGACATTAGATCTGTTAAAGTTGTTTGG
GACGAATTACGTGATCGCTTCAAGCAATCCAATGACCATAGCATTTATCAGTTTCACAAGGAAATGACTGATTGGACCTTGGAGGACCCTTTGGCAGCTTCTCATTGGCT
GGATTTTGCTGATTAA
Protein sequenceShow/hide protein sequence
MVDRESRRIDPVMAIESKIESLFFTQFFFCYSSILVSVSSWHDQLHFLESCDENGYLRRNKTGFITDKIKKPTEGTWECNNDIIVSWILKLVSKEIVASIVDIRSVKVVW
DELRDRFKQSNDHSIYQFHKEMTDWTLEDPLAASHWLDFAD