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Spg027011 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027011
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Genome locationscaffold8:6606886..6608517
RNA-Seq ExpressionSpg027011
SyntenySpg027011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.0e-0833.33Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV
        K VA  A +A + ETE     YE  + N    + L   K   L        LP F+   IT H W+QFCA P+     +VR+FYAN+ +       VRGV
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV

Query:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
         V W   AIN++F L + P   ++E +   +   L   +  V + GA+W+
Subjt:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.5e-0731.17Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K VA  A++A + ++E     YE  + N                E+GF G+N      P F+   IT H W+ FCA P+   + +VR+FYAN+   +   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ
          VRGV V     AIN+++ L + P   ++E V A +  +L   +  V I GA+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.5e-0934Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV
        K VA  A +A + ETE     YE  + N    + L   K   L        LP F+   IT H W+QFCA P+     +VR+FYAN+ + E     VRGV
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV

Query:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
         V W   AIN++F L + P   ++E +   +   L   +  V   GA+W+
Subjt:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]3.2e-0730.77Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K V   A++A + ++E     YE  + N                E+GF G+N      P F+   IT H W+ FCA P+     +VR+FYAN+   +   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
          VRGV V     AIN+++ L + P   ++E V A +  +L   +  V I GA+W+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]1.9e-0733.12Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPH------FLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K VA  A +A + ETEE    YE             I K     E+GF  N         F+   I  H W QFCA P+     +VR+FYAN+ + E   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPH------FLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ
          VRGV V W   AIN++F L + P   ++E V   +  +L   +  V   GA+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.8e-0933.33Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV
        K VA  A +A + ETE     YE  + N    + L   K   L        LP F+   IT H W+QFCA P+     +VR+FYAN+ +       VRGV
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV

Query:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
         V W   AIN++F L + P   ++E +   +   L   +  V + GA+W+
Subjt:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

A0A2P5B0K0 Uncharacterized protein1.2e-0731.17Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K VA  A++A + ++E     YE  + N                E+GF G+N      P F+   IT H W+ FCA P+   + +VR+FYAN+   +   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ
          VRGV V     AIN+++ L + P   ++E V A +  +L   +  V I GA+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ

A0A2P5BCG4 Uncharacterized protein (Fragment)2.2e-0934Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV
        K VA  A +A + ETE     YE  + N    + L   K   L        LP F+   IT H W+QFCA P+     +VR+FYAN+ + E     VRGV
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGV

Query:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
         V W   AIN++F L + P   ++E +   +   L   +  V   GA+W+
Subjt:  AVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

A0A2P5CXV1 Uncharacterized protein1.6e-0730.77Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K V   A++A + ++E     YE  + N                E+GF G+N      P F+   IT H W+ FCA P+     +VR+FYAN+   +   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGF-GEN-----LPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS
          VRGV V     AIN+++ L + P   ++E V A +  +L   +  V I GA+W+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQWS

A0A2P5EK98 Uncharacterized protein (Fragment)9.1e-0833.12Show/hide
Query:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPH------FLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ
        K VA  A +A + ETEE    YE             I K     E+GF  N         F+   I  H W QFCA P+     +VR+FYAN+ + E   
Subjt:  KGVAEAATEAEEAETEEPRMSYERFVNNLAKEKYLEILKWDCLFERGFGENLPH------FLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQ

Query:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ
          VRGV V W   AIN++F L + P   ++E V   +  +L   +  V   GA+
Subjt:  AIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPSNDQLNAAVREVGIEGAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATACGAGAGGGAGAAGAGAAAGAGACGCTGAGGAAGAAGAGGTGCCAGTTACACCTGAGGCACCGAAGAAGAAAACAAAGAGAAGAAAAACACCCGAAGAGAG
AGAGGCCAAAAGATTAAGGAGGCAACAACAAGCTGAAGTAACAGAGGTTGTGAGAAAGCAGGAAATTCAGGAAAAGGGAGCAGAGGATGTGCCGGAGCAAGGGAATGGTC
AAGAAGCCCAAGAACAACAGGTTCAGGGAGAAGTTGTACCGAAGGGCAAGGGAGTTGCTGAAGCAGCAACTGAGGCAGAAGAGGCTGAGACTGAAGAGCCAAGAATGTCA
TATGAGCGCTTCGTCAATAATCTTGCCAAAGAAAAATATCTGGAAATCCTGAAATGGGACTGCCTATTTGAGCGAGGATTTGGAGAAAACCTACCACATTTTCTTAGATC
AGGGATCACGAACCATGGATGGGAGCAATTCTGTGCGAAGCCAAAGTCAGCAAATTCAAATATTGTTCGCAAATTCTATGCGAACATTGATGAAGTGGAAGGCTTCCAAG
CGATTGTCCGAGGGGTTGCTGTAGACTGGAGGCTAGGCGCGATAAACTCTCTATTCAACCTCCCGAATTTCCCCCACGTCAGATACAATGAGATGGTCGTAGCACCATCT
AACGATCAGTTGAACGCGGCTGTGAGAGAAGTTGGGATTGAAGGGGCTCAGTGGAGTAGGCAAGAGTATGCTGAGAGGCAAGCTCAAACCTTCTGGACTTATGTTAAGAG
AAGGGATGCCACGTTAAGGAGGACACTGCAATCGAATTTTTCAAAGTCGTATGCTGCCTTCCCAGTTTTCCCCGATGACTTGCTAAACCCCAGGATCCCACCCCCGCCAG
TCGAAAGAGAGGAGGACGAAGAAGATGATCAGGGTCAGGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATACGAGAGGGAGAAGAGAAAGAGACGCTGAGGAAGAAGAGGTGCCAGTTACACCTGAGGCACCGAAGAAGAAAACAAAGAGAAGAAAAACACCCGAAGAGAG
AGAGGCCAAAAGATTAAGGAGGCAACAACAAGCTGAAGTAACAGAGGTTGTGAGAAAGCAGGAAATTCAGGAAAAGGGAGCAGAGGATGTGCCGGAGCAAGGGAATGGTC
AAGAAGCCCAAGAACAACAGGTTCAGGGAGAAGTTGTACCGAAGGGCAAGGGAGTTGCTGAAGCAGCAACTGAGGCAGAAGAGGCTGAGACTGAAGAGCCAAGAATGTCA
TATGAGCGCTTCGTCAATAATCTTGCCAAAGAAAAATATCTGGAAATCCTGAAATGGGACTGCCTATTTGAGCGAGGATTTGGAGAAAACCTACCACATTTTCTTAGATC
AGGGATCACGAACCATGGATGGGAGCAATTCTGTGCGAAGCCAAAGTCAGCAAATTCAAATATTGTTCGCAAATTCTATGCGAACATTGATGAAGTGGAAGGCTTCCAAG
CGATTGTCCGAGGGGTTGCTGTAGACTGGAGGCTAGGCGCGATAAACTCTCTATTCAACCTCCCGAATTTCCCCCACGTCAGATACAATGAGATGGTCGTAGCACCATCT
AACGATCAGTTGAACGCGGCTGTGAGAGAAGTTGGGATTGAAGGGGCTCAGTGGAGTAGGCAAGAGTATGCTGAGAGGCAAGCTCAAACCTTCTGGACTTATGTTAAGAG
AAGGGATGCCACGTTAAGGAGGACACTGCAATCGAATTTTTCAAAGTCGTATGCTGCCTTCCCAGTTTTCCCCGATGACTTGCTAAACCCCAGGATCCCACCCCCGCCAG
TCGAAAGAGAGGAGGACGAAGAAGATGATCAGGGTCAGGAAGATTGA
Protein sequenceShow/hide protein sequence
MANTRGRRERDAEEEEVPVTPEAPKKKTKRRKTPEEREAKRLRRQQQAEVTEVVRKQEIQEKGAEDVPEQGNGQEAQEQQVQGEVVPKGKGVAEAATEAEEAETEEPRMS
YERFVNNLAKEKYLEILKWDCLFERGFGENLPHFLRSGITNHGWEQFCAKPKSANSNIVRKFYANIDEVEGFQAIVRGVAVDWRLGAINSLFNLPNFPHVRYNEMVVAPS
NDQLNAAVREVGIEGAQWSRQEYAERQAQTFWTYVKRRDATLRRTLQSNFSKSYAAFPVFPDDLLNPRIPPPPVEREEDEEDDQGQED