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Spg027018 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027018
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold8:5333590..5336099
RNA-Seq ExpressionSpg027018
SyntenySpg027018
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.7e-1734.12Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ I N +   +   L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  ++ 
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQNNIQRKDKASTSQATPPSGPSMASLSQ
          LFF SLIT+LC+  +     +EE+      ID   +  + Q     +    ++Q    S P+ AS S+
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQNNIQRKDKASTSQATPPSGPSMASLSQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.9e-1629.17Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ I+N + + +   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  ++ 
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN--NIQRKDKASTSQATPPSGPS------------------------MASLSQHTPF
          LFF SLIT+LC+  +     +EE+      ID   +  + Q       +  +S+  AT  S  +                        M SL QHT  
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN--NIQRKDKASTSQATPPSGPS------------------------MASLSQHTPF

Query:  TGPSPSSEALAIAYRQDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDDEEDENNEEDDEE
               +  A +  +D A+++   +      P FP FPQ +L   D + + E D++   +  E
Subjt:  TGPSPSSEALAIAYRQDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDDEEDENNEEDDEE

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.7e-1731.67Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ + + +  ++   L+ VA  G +W  S   V T + S L P + +W HFLK+RL+PTTH   +S +RV+LLY ++ G  IN+G +I  EI AC  +++
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN---------NIQRKDKASTSQATPPSGPSMASLSQH
          LFF SLI ++C+  +     +EE+      ID   +  + Q          +  R    S+S  T  +   + SL QH
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN---------NIQRKDKASTSQATPPSGPSMASLSQH

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.0e-1635.4Show/hide
Query:  QMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRASKLFFGSLIT
        ++   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S +RV+LLY ++ G  IN+G II  EI A   +++  LFF SLIT
Subjt:  QMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRASKLFFGSLIT

Query:  QLCQRVKIVSGKDEERHFFKPTIDLSLIGNL-QQNNIQRKDKASTSQATPPSGPSMASLSQ
        ++C   +     +EE+      ID   +  + Q+   +   + S+S+   P+  S +S S+
Subjt:  QLCQRVKIVSGKDEERHFFKPTIDLSLIGNL-QQNNIQRKDKASTSQATPPSGPSMASLSQ

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.0e-1637.3Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ + + +  ++   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+G +I  EI AC  +++
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEER
          LFF SLIT +C+  +     +EE+
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEER

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.3e-1734.12Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ I N +   +   L+ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  ++ 
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQNNIQRKDKASTSQATPPSGPSMASLSQ
          LFF SLIT+LC+  +     +EE+      ID   +  + Q     +    ++Q    S P+ AS S+
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQNNIQRKDKASTSQATPPSGPSMASLSQ

A0A2P5BCG4 Uncharacterized protein (Fragment)1.9e-1629.17Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ I+N + + +   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  ++ 
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN--NIQRKDKASTSQATPPSGPS------------------------MASLSQHTPF
          LFF SLIT+LC+  +     +EE+      ID   +  + Q       +  +S+  AT  S  +                        M SL QHT  
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN--NIQRKDKASTSQATPPSGPS------------------------MASLSQHTPF

Query:  TGPSPSSEALAIAYRQDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDDEEDENNEEDDEE
               +  A +  +D A+++   +      P FP FPQ +L   D + + E D++   +  E
Subjt:  TGPSPSSEALAIAYRQDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDDEEDENNEEDDEE

A0A2P5BNT0 Uncharacterized protein (Fragment)1.3e-1731.67Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ + + +  ++   L+ VA  G +W  S   V T + S L P + +W HFLK+RL+PTTH   +S +RV+LLY ++ G  IN+G +I  EI AC  +++
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN---------NIQRKDKASTSQATPPSGPSMASLSQH
          LFF SLI ++C+  +     +EE+      ID   +  + Q          +  R    S+S  T  +   + SL QH
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQN---------NIQRKDKASTSQATPPSGPSMASLSQH

A0A2P5CPE8 Uncharacterized protein5.0e-1735.4Show/hide
Query:  QMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRASKLFFGSLIT
        ++   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S +RV+LLY ++ G  IN+G II  EI A   +++  LFF SLIT
Subjt:  QMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRASKLFFGSLIT

Query:  QLCQRVKIVSGKDEERHFFKPTIDLSLIGNL-QQNNIQRKDKASTSQATPPSGPSMASLSQ
        ++C   +     +EE+      ID   +  + Q+   +   + S+S+   P+  S +S S+
Subjt:  QLCQRVKIVSGKDEERHFFKPTIDLSLIGNL-QQNNIQRKDKASTSQATPPSGPSMASLSQ

A0A2P5DAQ2 Uncharacterized protein1.4e-1637.3Show/hide
Query:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA
        ++ + + +  ++   L+ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+G +I  EI AC  +++
Subjt:  NDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA

Query:  SKLFFGSLITQLCQRVKIVSGKDEER
          LFF SLIT +C+  +     +EE+
Subjt:  SKLFFGSLITQLCQRVKIVSGKDEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACACGAGAAGGACGAGACCCACGGGTTTCTCGCCGGCGATCGTGAACCAAGAGCCCAACGCTCAAACTCTTTCTTCCTCGGCAATGTCGGCCAGCTCGAGGGA
GAATCCGAGTTCGTCTGCACCTAGGAGGTCCACGCGCGCCACTACCGTTCGCCAAACCCAAAGACCCGCAGCTCAACAGTTCAAGAAACGTTCGCGGGAGTGGAACAAGC
CATTCGTCACCTATAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCCGAAAAGCCACTTGTCATCGAGCCTCTCAAAGTAGCAAGAATGCCCCCGGACGTGTTCGAG
GACATAATTCGCCAAGCTGTGGCAAAGGCTCTCGTGATTGCTGAAGGTGAAGCTGAGATGCTGCAAGGAAGAAAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATTT
AGAAAAAGAAAAAGAAAAAGATCAAGAGGATGAAGGTCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCAGAGGCCGCTGAAGCTCAGCCTACTGATG
AGAAGAGAGGTGAAGAAGAGAAAGAAAGCAAGGAGGTCGAGACCTCCAGTGACTCTGAAACAGAATCCGACTCAGAGATCAAGGAGCTGGATGACGACCAAGTTCTTATT
TCTGCGGCATTGAGGAGAGAGAGAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAGAACAAGAATGACCCGATATTTTCCAAGAGGTCGAGGACTAGGTCCATGGACGC
CTCTCTAGCAGCTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGCTAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTACCCGAGGCACCCCTGAATCCAAGAGGGA
ACGATATTATCAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAAACTTGTGGCCAACAAGGGTGTTCAATGGAAAGAGTCTCAAACGAAGGTGAAGACTCTAGTC
CCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGTTTGATGCCAACCACCCATGATAGCACAATCTCAGTGGATAGAGTTATGCTACTCTA
TTGTATTATGAAGGGGTTGGAGATCAACATTGGGAGCATAATCAGGGATGAAATTCTAGCCTGTGGAAGAAAACGAGCAAGTAAACTTTTCTTTGGATCACTCATCACCC
AGCTTTGTCAGAGGGTGAAGATAGTTTCGGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAATCTCCAACAGAACAACATCCAA
AGGAAAGATAAAGCCTCCACATCTCAGGCCACTCCACCATCAGGGCCGAGCATGGCTTCTCTATCCCAACACACTCCTTTTACAGGGCCCTCACCGTCATCTGAGGCCCT
AGCCATTGCCTACCGCCAGGATGAGGCCATTAGAGAGTTCTATCTCTCTATCGCTCCGAGTATTGCTCCAGTTTTTCCCAATTTCCCTCAGTCGTTGCTGCCTCAAGAAG
ACAAGGATTCTGATGATGAAGAAGATGAAAATAATGAAGAAGATGATGAAGAGCAAGAGAGTTCCTCGGACGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAACACGAGAAGGACGAGACCCACGGGTTTCTCGCCGGCGATCGTGAACCAAGAGCCCAACGCTCAAACTCTTTCTTCCTCGGCAATGTCGGCCAGCTCGAGGGA
GAATCCGAGTTCGTCTGCACCTAGGAGGTCCACGCGCGCCACTACCGTTCGCCAAACCCAAAGACCCGCAGCTCAACAGTTCAAGAAACGTTCGCGGGAGTGGAACAAGC
CATTCGTCACCTATAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCCGAAAAGCCACTTGTCATCGAGCCTCTCAAAGTAGCAAGAATGCCCCCGGACGTGTTCGAG
GACATAATTCGCCAAGCTGTGGCAAAGGCTCTCGTGATTGCTGAAGGTGAAGCTGAGATGCTGCAAGGAAGAAAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATTT
AGAAAAAGAAAAAGAAAAAGATCAAGAGGATGAAGGTCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCAGAGGCCGCTGAAGCTCAGCCTACTGATG
AGAAGAGAGGTGAAGAAGAGAAAGAAAGCAAGGAGGTCGAGACCTCCAGTGACTCTGAAACAGAATCCGACTCAGAGATCAAGGAGCTGGATGACGACCAAGTTCTTATT
TCTGCGGCATTGAGGAGAGAGAGAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAGAACAAGAATGACCCGATATTTTCCAAGAGGTCGAGGACTAGGTCCATGGACGC
CTCTCTAGCAGCTCCTCCTACCGTCTCACCCGCCAAGCCAAAGGCTAAATCACCTAAGGCTGCATCTCCTAAAAATCCATTACCCGAGGCACCCCTGAATCCAAGAGGGA
ACGATATTATCAGGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAAACTTGTGGCCAACAAGGGTGTTCAATGGAAAGAGTCTCAAACGAAGGTGAAGACTCTAGTC
CCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGTTTGATGCCAACCACCCATGATAGCACAATCTCAGTGGATAGAGTTATGCTACTCTA
TTGTATTATGAAGGGGTTGGAGATCAACATTGGGAGCATAATCAGGGATGAAATTCTAGCCTGTGGAAGAAAACGAGCAAGTAAACTTTTCTTTGGATCACTCATCACCC
AGCTTTGTCAGAGGGTGAAGATAGTTTCGGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAATCTCCAACAGAACAACATCCAA
AGGAAAGATAAAGCCTCCACATCTCAGGCCACTCCACCATCAGGGCCGAGCATGGCTTCTCTATCCCAACACACTCCTTTTACAGGGCCCTCACCGTCATCTGAGGCCCT
AGCCATTGCCTACCGCCAGGATGAGGCCATTAGAGAGTTCTATCTCTCTATCGCTCCGAGTATTGCTCCAGTTTTTCCCAATTTCCCTCAGTCGTTGCTGCCTCAAGAAG
ACAAGGATTCTGATGATGAAGAAGATGAAAATAATGAAGAAGATGATGAAGAGCAAGAGAGTTCCTCGGACGAGGACTAG
Protein sequenceShow/hide protein sequence
MHNTRRTRPTGFSPAIVNQEPNAQTLSSSAMSASSRENPSSSAPRRSTRATTVRQTQRPAAQQFKKRSREWNKPFVTYSARKRSPKKVVPEKPLVIEPLKVARMPPDVFE
DIIRQAVAKALVIAEGEAEMLQGRKEEAQQGPTEENLEKEKEKDQEDEGQNATASGPHSEEGLAEAAEAQPTDEKRGEEEKESKEVETSSDSETESDSEIKELDDDQVLI
SAALRRERRREIKAERRTKNKNDPIFSKRSRTRSMDASLAAPPTVSPAKPKAKSPKAASPKNPLPEAPLNPRGNDIIRNPSAKQMKEALKLVANKGVQWKESQTKVKTLV
PSDLKPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRASKLFFGSLITQLCQRVKIVSGKDEERHFFKPTIDLSLIGNLQQNNIQ
RKDKASTSQATPPSGPSMASLSQHTPFTGPSPSSEALAIAYRQDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDDEEDENNEEDDEEQESSSDED