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Spg027023 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027023
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTetratricopeptide-like helical
Genome locationscaffold8:3530713..3531964
RNA-Seq ExpressionSpg027023
SyntenySpg027023
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147349.3 uncharacterized protein LOC101214268 [Cucumis sativus]2.0e-4381.89Show/hide
Query:  MGSATARVLIPHLLFP--SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVS
        MGS TAR+LIPHLL P  SSSSHNPSTN   K SKPLSF NH  LPTRR LLFSLPIATA LLPIP NPI PS   A ESFDPVSRSEK+ASAAISRRVS
Subjt:  MGSATARVLIPHLLFP--SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVS

Query:  EAVELLDKGRELQAIGDFNQALLCFTQ
        EAVELLDKGRELQA+GDFNQALL FTQ
Subjt:  EAVELLDKGRELQAIGDFNQALLCFTQ

XP_008460886.1 PREDICTED: uncharacterized protein LOC103499627 [Cucumis melo]6.1e-4580.45Show/hide
Query:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA
        MGS TAR+LIPHLLFP        SSSSHNPSTNP+ K SKPLSF NH  LPTRR LLFSLPIATA LLPIP+NPI PS   A ESFDPVSRSEKEASAA
Subjt:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA

Query:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ
        ISRRVSEAVELLDKGRELQA+GDFNQALL FTQ
Subjt:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ

XP_038901434.1 uncharacterized protein LOC120088306 isoform X2 [Benincasa hispida]4.4e-4380.8Show/hide
Query:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA
        MGSATARVL PHLLFPSSSSHNP  NPN K  KP +F NH  LPTRR LLFSLPIATA LLPI SN   PS C A ESFDPVSRSE+EASAAISRRVSEA
Subjt:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA

Query:  VELLDKGRELQAIGDFNQALLCFTQ
        VELLDKGRELQA+GDFNQALL FT+
Subjt:  VELLDKGRELQAIGDFNQALLCFTQ

XP_038901435.1 uncharacterized protein LOC120088306 isoform X3 [Benincasa hispida]4.4e-4380.8Show/hide
Query:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA
        MGSATARVL PHLLFPSSSSHNP  NPN K  KP +F NH  LPTRR LLFSLPIATA LLPI SN   PS C A ESFDPVSRSE+EASAAISRRVSEA
Subjt:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA

Query:  VELLDKGRELQAIGDFNQALLCFTQ
        VELLDKGRELQA+GDFNQALL FT+
Subjt:  VELLDKGRELQAIGDFNQALLCFTQ

XP_038901436.1 uncharacterized protein LOC120088306 isoform X4 [Benincasa hispida]4.4e-4380.8Show/hide
Query:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA
        MGSATARVL PHLLFPSSSSHNP  NPN K  KP +F NH  LPTRR LLFSLPIATA LLPI SN   PS C A ESFDPVSRSE+EASAAISRRVSEA
Subjt:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA

Query:  VELLDKGRELQAIGDFNQALLCFTQ
        VELLDKGRELQA+GDFNQALL FT+
Subjt:  VELLDKGRELQAIGDFNQALLCFTQ

TrEMBL top hitse value%identityAlignment
A0A0A0LN32 Uncharacterized protein9.6e-4481.89Show/hide
Query:  MGSATARVLIPHLLFP--SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVS
        MGS TAR+LIPHLL P  SSSSHNPSTN   K SKPLSF NH  LPTRR LLFSLPIATA LLPIP NPI PS   A ESFDPVSRSEK+ASAAISRRVS
Subjt:  MGSATARVLIPHLLFP--SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVS

Query:  EAVELLDKGRELQAIGDFNQALLCFTQ
        EAVELLDKGRELQA+GDFNQALL FTQ
Subjt:  EAVELLDKGRELQAIGDFNQALLCFTQ

A0A1S3CCZ2 uncharacterized protein LOC1034996273.0e-4580.45Show/hide
Query:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA
        MGS TAR+LIPHLLFP        SSSSHNPSTNP+ K SKPLSF NH  LPTRR LLFSLPIATA LLPIP+NPI PS   A ESFDPVSRSEKEASAA
Subjt:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA

Query:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ
        ISRRVSEAVELLDKGRELQA+GDFNQALL FTQ
Subjt:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ

A0A5D3BSI6 Tetratricopeptide-like helical3.0e-4580.45Show/hide
Query:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA
        MGS TAR+LIPHLLFP        SSSSHNPSTNP+ K SKPLSF NH  LPTRR LLFSLPIATA LLPIP+NPI PS   A ESFDPVSRSEKEASAA
Subjt:  MGSATARVLIPHLLFP--------SSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAA

Query:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ
        ISRRVSEAVELLDKGRELQA+GDFNQALL FTQ
Subjt:  ISRRVSEAVELLDKGRELQAIGDFNQALLCFTQ

A0A6J1F108 uncharacterized protein LOC1114383402.6e-4181.6Show/hide
Query:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA
        M S TAR LIPHLLFPSSS+ NP+ NPN KPSKP+S     RLPTRR LLFSLPIATA+LLPIPSNPI PS CDA E FDPVSRSE+EASAAISRRVSEA
Subjt:  MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEA

Query:  VELLDKGRELQAIGDFNQALLCFTQ
        VELLDKGRELQA+GDFNQALL FTQ
Subjt:  VELLDKGRELQAIGDFNQALLCFTQ

A0A6J1I3T3 uncharacterized protein LOC1114703083.8e-4079.37Show/hide
Query:  MGSATARVLIPHLLFPSSSSHNPSTNPNP-KPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSE
        M S TA  LIPHLLFPSS     STNPNP KPSKP+SF    RLPT+R LLFSLPIATA+LLPIPSNPI PS CDA ESFDPVSRSE+EASA ISRRVSE
Subjt:  MGSATARVLIPHLLFPSSSSHNPSTNPNP-KPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSE

Query:  AVELLDKGRELQAIGDFNQALLCFTQ
        AVELLDKGRELQA+GDF+QALL FTQ
Subjt:  AVELLDKGRELQAIGDFNQALLCFTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTGCAACTGCAAGAGTACTGATTCCTCATCTTCTCTTTCCCTCTTCTTCTTCTCACAATCCTTCAACAAACCCTAACCCCAAGCCTTCAAAACCACTCTCATT
TTCTAACCATTATCGATTACCGACCAGGCGTTTCTTGCTCTTCTCTCTCCCCATAGCCACTGCCATTCTGCTCCCAATTCCGAGCAATCCGATTCATCCGAGTCCTTGCG
ATGCTGCGGAGAGCTTTGATCCTGTGAGCCGTTCTGAGAAGGAAGCGAGTGCCGCCATCTCCCGAAGAGTATCAGAAGCTGTGGAGCTTCTTGATAAAGGCAGAGAGTTG
CAAGCTATTGGCGATTTCAATCAAGCTCTTCTCTGCTTCACTCAGGGGAGCAATCTCGTTATGATGATGGTCACGGTCATGGAAAGATTCCAAACAATTTTGGAATTCGT
CTCTGCCCATACGGGTGATAGTCCCGAATCCATAGTTAGACGAACTCCCTCTACAAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTGCAACTGCAAGAGTACTGATTCCTCATCTTCTCTTTCCCTCTTCTTCTTCTCACAATCCTTCAACAAACCCTAACCCCAAGCCTTCAAAACCACTCTCATT
TTCTAACCATTATCGATTACCGACCAGGCGTTTCTTGCTCTTCTCTCTCCCCATAGCCACTGCCATTCTGCTCCCAATTCCGAGCAATCCGATTCATCCGAGTCCTTGCG
ATGCTGCGGAGAGCTTTGATCCTGTGAGCCGTTCTGAGAAGGAAGCGAGTGCCGCCATCTCCCGAAGAGTATCAGAAGCTGTGGAGCTTCTTGATAAAGGCAGAGAGTTG
CAAGCTATTGGCGATTTCAATCAAGCTCTTCTCTGCTTCACTCAGGGGAGCAATCTCGTTATGATGATGGTCACGGTCATGGAAAGATTCCAAACAATTTTGGAATTCGT
CTCTGCCCATACGGGTGATAGTCCCGAATCCATAGTTAGACGAACTCCCTCTACAAGTGCTTGA
Protein sequenceShow/hide protein sequence
MGSATARVLIPHLLFPSSSSHNPSTNPNPKPSKPLSFSNHYRLPTRRFLLFSLPIATAILLPIPSNPIHPSPCDAAESFDPVSRSEKEASAAISRRVSEAVELLDKGREL
QAIGDFNQALLCFTQGSNLVMMMVTVMERFQTILEFVSAHTGDSPESIVRRTPSTSA