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Spg027052 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027052
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold8:8792585..8796990
RNA-Seq ExpressionSpg027052
SyntenySpg027052
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]8.6e-1145.78Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGII
        F++  LLPT+HDSTVSR+R+ +++ I+    I+VGK+I+ EIF+C  +  GKLFF   IT  C+ A VPM  D+  +  KG++
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGII

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.0e-1347.92Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE
        F+K  LLPTTH  TVS+DR+LL+ ++L+  SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-1348.35Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        F+K RLLPTTH  TVS+DR+LL+ ++L+  SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]5.4e-1348.96Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE
        F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+  TQE
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]6.6e-1145.05Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        F+K RLLPTTH   VS++ VLL++++L   SI+VG+II  EI  C  +K G LFFP+ IT +C+ A  P   ++  L + G ID   +AR+
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.4e-1347.92Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE
        F+K  LLPTTH  TVS+DR+LL+ ++L+  SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.5e-1348.35Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        F+K RLLPTTH  TVS+DR+LL+ ++L+  SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

A0A2P5CEY2 Uncharacterized protein2.6e-1348.96Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE
        F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L   G ID   +AR+  TQE
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE

A0A2P5CXU3 Uncharacterized protein (Fragment)3.2e-1145.05Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        F+K RLLPTTH   VS++ VLL++++L   SI+VG+II  EI  C  +K G LFFP+ IT +C+ A  P   ++  L + G ID   +AR+
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

A0A2P5DXM3 Uncharacterized protein4.2e-1147.92Show/hide
Query:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE
        F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  FIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCATCAAGTTGCGCTTACTGCCGACAACTCACGATTCAACGGTGTCTCGGGATAGGGTACTTCTTGTGTTTGCTATTCTGCTTTCCATGAGCATTGATGTGGG
AAAAATAATTTCCAGTGAGATTTTCGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACGATGTTATGCCAAAGGGCAGGGGTTCCAATGAATG
CGGATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCAAGCCAAGGAGCATTTCTTCTAGCTTGGTTGTTG
CTGCGGCAAGAAGATTCTGAGGTAGTGTTGACTTATGTGATCCACTTTAAGCTTAGCTCTAGTCCCACGCTCAGTTTAGGCTGTGGCAAGTTCTTAGAATTAAGTAAAAG
GTCGGTGATCATTCGTCCATGCTGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTAAAGGCAAAGCAAGCATCTGGTCACGCCAGATCATGC
CTCCACGTGAACGAGGTCATGGAAGAGGTCGTGGAAGAGGCCGTGGTAGGGGTCACATAGCCCCAGAAGTAGTTGTGCCACCAATGGGGCAGGAAGATAATCTAGCAGAA
GACCCACAAAAAACATGGGGAATCAGGCAAATTTCCCATAAATGCAACCGCATTTCTGGAAAGGCTAAAGTGAAATGCGACCACATTTCTGGGCAGATGCAGACAGTTTC
GAGTCCGTCGCGGGTCATTTTGAACGAGCGTTTTGCGCACCTAACCGGCTGTTTTGACTCCGAAACCAACTGGGCCACCTGCAAGCACCATTTTCGTGACTCTTCAAGCA
CTCCCCACACTATAAAAGGCCACGATTCGAAGGCAAATTCAAGCATAACTCACTGGGAAGAAGAGGGTGGTGACAGAACCCTAGTAGACGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCATCAAGTTGCGCTTACTGCCGACAACTCACGATTCAACGGTGTCTCGGGATAGGGTACTTCTTGTGTTTGCTATTCTGCTTTCCATGAGCATTGATGTGGG
AAAAATAATTTCCAGTGAGATTTTCGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACGATGTTATGCCAAAGGGCAGGGGTTCCAATGAATG
CGGATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCAAGCCAAGGAGCATTTCTTCTAGCTTGGTTGTTG
CTGCGGCAAGAAGATTCTGAGGTAGTGTTGACTTATGTGATCCACTTTAAGCTTAGCTCTAGTCCCACGCTCAGTTTAGGCTGTGGCAAGTTCTTAGAATTAAGTAAAAG
GTCGGTGATCATTCGTCCATGCTGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTAAAGGCAAAGCAAGCATCTGGTCACGCCAGATCATGC
CTCCACGTGAACGAGGTCATGGAAGAGGTCGTGGAAGAGGCCGTGGTAGGGGTCACATAGCCCCAGAAGTAGTTGTGCCACCAATGGGGCAGGAAGATAATCTAGCAGAA
GACCCACAAAAAACATGGGGAATCAGGCAAATTTCCCATAAATGCAACCGCATTTCTGGAAAGGCTAAAGTGAAATGCGACCACATTTCTGGGCAGATGCAGACAGTTTC
GAGTCCGTCGCGGGTCATTTTGAACGAGCGTTTTGCGCACCTAACCGGCTGTTTTGACTCCGAAACCAACTGGGCCACCTGCAAGCACCATTTTCGTGACTCTTCAAGCA
CTCCCCACACTATAAAAGGCCACGATTCGAAGGCAAATTCAAGCATAACTCACTGGGAAGAAGAGGGTGGTGACAGAACCCTAGTAGACGCATGA
Protein sequenceShow/hide protein sequence
MGFIKLRLLPTTHDSTVSRDRVLLVFAILLSMSIDVGKIISSEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQRTQEASQGAFLLAWLL
LRQEDSEVVLTYVIHFKLSSSPTLSLGCGKFLELSKRSVIIRPCWKNYFAAAELGFAECSGKGKASIWSRQIMPPRERGHGRGRGRGRGRGHIAPEVVVPPMGQEDNLAE
DPQKTWGIRQISHKCNRISGKAKVKCDHISGQMQTVSSPSRVILNERFAHLTGCFDSETNWATCKHHFRDSSSTPHTIKGHDSKANSSITHWEEEGGDRTLVDA