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Spg027063 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027063
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNADH dehydrogenase subunit 4L
Genome locationscaffold8:5693889..5694284
RNA-Seq ExpressionSpg027063
SyntenySpg027063
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0005525 - GTP binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K
IPR039428 - NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7117260.1 hypothetical protein RHSIM_RhsimMtG0003100 [Rhododendron simsii]1.7e-3092.05Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR------GQGLSRWASASDSK
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIG AIFVITFR      GQGLSRWASASDSK
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR------GQGLSRWASASDSK

KAF7117263.1 hypothetical protein RHSIM_RhsimMtG0007900 [Rhododendron simsii]1.7e-3092.05Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR------GQGLSRWASASDSK
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIG AIFVITFR      GQGLSRWASASDSK
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR------GQGLSRWASASDSK

KAG9438659.1 hypothetical protein H6P81_021402 [Aristolochia fimbriata]3.5e-2881.82Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR--------------GQGLSRWASASDSKVLS
        IRGILLNRRNI IMSMPIESMLLAVNSNFLVFSVS DDMMGQSFASLVPTVAAAESAIGLAIFVITFR              G GLSRWASASDS VLS
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR--------------GQGLSRWASASDSKVLS

KJB09731.1 hypothetical protein B456_001G160700, partial [Gossypium raimondii]7.2e-2689.16Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVS DDMMGQSFASLVPTVAAAESAIGLAIFVITFR +    GLS WAS S
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS

PHU04730.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]5.9e-2893.51Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQGLSRWAS
        IRGILLNRRNIPIMSMPIESMLLA+NSNFLVFSVSS+DMMGQSFASLVP VAAAESAIGLAIFVITF+GQGLSRWA+
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQGLSRWAS

TrEMBL top hitse value%identityAlignment
A0A0D2PZK6 Uncharacterized protein (Fragment)3.5e-2689.16Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVS DDMMGQSFASLVPTVAAAESAIGLAIFVITFR +    GLS WAS S
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS

A0A290WKW3 NADH dehydrogenase subunit 4L1.3e-2597.18Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

A0A2G3BE29 Photosystem I P700 chlorophyll a apoprotein A12.9e-2893.51Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQGLSRWAS
        IRGILLNRRNIPIMSMPIESMLLA+NSNFLVFSVSS+DMMGQSFASLVP VAAAESAIGLAIFVITF+GQGLSRWA+
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQGLSRWAS

A0A5D2CWU4 Uncharacterized protein3.5e-2689.16Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVS DDMMGQSFASLVPTVAAAESAIGLAIFVITFR +    GLS WAS S
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQ----GLSRWASAS

W0FGD7 NADH-ubiquinone oxidoreductase chain 4L1.3e-2597.18Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

SwissProt top hitse value%identityAlignment
P26851 NADH-ubiquinone oxidoreductase chain 4L4.9e-1776.06Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        I GI LNR+NI IM M IE MLLAVN NFLVFSV  DDMMGQ FA  V TVAAAESAIGLAI VITFR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

Q04614 NADH-ubiquinone oxidoreductase chain 4L1.6e-2084.51Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        I GILLNRRNI IM M IE MLLAVNSNFLVFSVS DDMMGQ FA LV TVAAAESAIGLAIFVITFR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

Q0BSL2 NADH-quinone oxidoreductase subunit K1.6e-1259.15Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        I GI LNR+N+ +M M IE +LLAVN N + FS S  D+ GQ FA  + TVAAAE+AIGLAI VI FR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

Q37627 NADH-ubiquinone oxidoreductase chain 4L3.0e-1464.79Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        I GI LNR+NI +M M IE MLLAVN NFL+FSV  DD +GQ FA L+ TVAAAESAIGLA+ V+ +R +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

Q6N5N4 NADH-quinone oxidoreductase subunit K 19.5e-1359.42Show/hide
Query:  GILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        GI LNR+N+ I+ M IE MLLAVN N + FS+  +D++GQ FA LV TVAAAE+AIGLA+ V+ FR +G
Subjt:  GILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG

Arabidopsis top hitse value%identityAlignment
ATMG00650.1 NADH dehydrogenase subunit 4L1.3e-2895.77Show/hide
Query:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG
        IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQ FASLVPTVAAAESAIGLAIFVITFR +G
Subjt:  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGA
TGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGGTCAGGGCCTTTCTC
GCTGGGCGAGTGCATCCGATTCGAAAGTCCTTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGA
TGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGGTCAGGGCCTTTCTC
GCTGGGCGAGTGCATCCGATTCGAAAGTCCTTTCCTAA
Protein sequenceShow/hide protein sequence
IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRGQGLSRWASASDSKVLS