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Spg027076 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027076
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold8:8691446..8704110
RNA-Seq ExpressionSpg027076
SyntenySpg027076
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047666.1 MuDR family transposase [Cucumis melo var. makuwa]7.5e-1447.56Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+SI  +  K+I +T ++  C P ++++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]8.2e-1346.34Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +  ++  C P D+++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.7e-1348.78Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +T ++  C P D+++Y K +HG+NISYDK WRGR  ALN +K +PE+SYA + AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.7e-1347.56Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +T ++  C P D+++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]3.1e-1245.12Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +T +++ C P D+++Y K +H +NISYDK W GR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

TrEMBL top hitse value%identityAlignment
A0A5A7U0B5 MuDR family transposase3.6e-1447.56Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+SI  +  K+I +T ++  C P ++++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

A0A5A7V1Z6 CCHC-type domain-containing protein4.0e-1346.34Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +  ++  C P D+++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like8.0e-1448.78Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +T ++  C P D+++Y K +HG+NISYDK WRGR  ALN +K +PE+SYA + AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

A0A5D3C3J6 Gag/pol protein1.5e-1262.5Show/hide
Query:  KNVGYGLLFTRDCPLICMGESGLHADSISLPFWGQDRVGSWEDNHTRWNSLLPDSR
        +++G   ++ RDCPL C GESG   DSI L FWGQDRVGSWE NHTRWNS +P  R
Subjt:  KNVGYGLLFTRDCPLICMGESGLHADSISLPFWGQDRVGSWEDNHTRWNSLLPDSR

A0A5D3E198 MuDRA-like transposase8.0e-1447.56Show/hide
Query:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG
        H+QAT+ I  +  K+I +T ++  C P D+++Y K +HG+NISYDK WRGR  ALN ++ +PE+SYA ++AF+  LI  N G
Subjt:  HQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAFAARLIEKNSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTGCAACCATGGCAGAATCTTGGTTCAATAAGAGAGGAAGACATAGCACAGAATTTTCATGCAAATCTGAAGGGTCTCTATTTTTCTCTGGTTTTTCGAACGTT
CTGGGGTGTACACGTTGAATTAGAAGCTCAATTTGGCCAAGAGGAAATTGGTTATATTTCGTTGTTCACGTTGAGTGTACTCCGTGACAATGATGCTGTCGTGAGTGTTG
GGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGTGTGCCCTACACAACGTAGATTTGTCATGGGGAGCCCAAGAGTCAACCATGAAGAGAAGATC
CAAAAAGAATTGAAGTTGGCCCAAGTTTCAAGCCCAATTCCGCGTCTGCTGGGTCTGGAAACCGCACAGCATCGCAACGCTGTCCCATTTCTTGGCAGACAATGCGAACA
CCACCACTATGGCTACACCGGTATGATTCTAAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAAATATTTCTGTGTCCA
CGGATATTGACCAATGCAGAGTTCCTCTCGGGCCAGGAGAGGACGGCGCACCTTTGTTCAAGTCCCGAAATCAGCCCTTAAGGGAACACACATCTACTTACCCCAATAGG
GGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCCCATTCGGTCTTGCCCCTGAAATGACTAAGCTAGCAGGTAGTTCGGGAGGGGGTGTGACAATAGTGCA
CGCCCATCAGCAAGCGACTGCAAGCATTGCGTGCAAGTATGTGAAGATTATTATGAGGACCACTAACAGGATGCATTGCACACCTCGGGATATAATGGATTATGCTAAGA
AAAACCATGGAATCAATATTAGTTATGACAAAGAATGGAGGGGAAGAGGGAATGCTCTAAATGAGTTAAAAAGATCCCCTGAAGAGTCATATGCGCGTATTACAGCATTT
GCAGCTAGGTTGATCGAAAAAAATTCAGGTTGTTCATTAGAGGAGCACTGGGGACTTAAGGACGAAGATGTAACCCAGGGGAAAAACGTGGGTTATGGACTCCTGTTCAC
GAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCTTGCACGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAAGATAATCACACAA
GATGGAATTCACTCCTTCCCGACTCTAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCACTTAGGGCGTTGAGGTTATGTCTCGAGCTAGCAAGGGGACCTAAT
GGACCTACAGATCATGGGCTCCAACGAAAACAGAGAAATGTTGTTGAAATGCTATTGAAATGCGACTGCATTTTGCCAAGGCAAATGAAACGCGACTGCATTTCTGCCAA
GGTTGAAGTTAGTGCATGGACAAGGGGTGTCCACTCCTTGACATTGATCCTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTGCAACCATGGCAGAATCTTGGTTCAATAAGAGAGGAAGACATAGCACAGAATTTTCATGCAAATCTGAAGGGTCTCTATTTTTCTCTGGTTTTTCGAACGTT
CTGGGGTGTACACGTTGAATTAGAAGCTCAATTTGGCCAAGAGGAAATTGGTTATATTTCGTTGTTCACGTTGAGTGTACTCCGTGACAATGATGCTGTCGTGAGTGTTG
GGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGTGTGCCCTACACAACGTAGATTTGTCATGGGGAGCCCAAGAGTCAACCATGAAGAGAAGATC
CAAAAAGAATTGAAGTTGGCCCAAGTTTCAAGCCCAATTCCGCGTCTGCTGGGTCTGGAAACCGCACAGCATCGCAACGCTGTCCCATTTCTTGGCAGACAATGCGAACA
CCACCACTATGGCTACACCGGTATGATTCTAAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAAATATTTCTGTGTCCA
CGGATATTGACCAATGCAGAGTTCCTCTCGGGCCAGGAGAGGACGGCGCACCTTTGTTCAAGTCCCGAAATCAGCCCTTAAGGGAACACACATCTACTTACCCCAATAGG
GGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCCCATTCGGTCTTGCCCCTGAAATGACTAAGCTAGCAGGTAGTTCGGGAGGGGGTGTGACAATAGTGCA
CGCCCATCAGCAAGCGACTGCAAGCATTGCGTGCAAGTATGTGAAGATTATTATGAGGACCACTAACAGGATGCATTGCACACCTCGGGATATAATGGATTATGCTAAGA
AAAACCATGGAATCAATATTAGTTATGACAAAGAATGGAGGGGAAGAGGGAATGCTCTAAATGAGTTAAAAAGATCCCCTGAAGAGTCATATGCGCGTATTACAGCATTT
GCAGCTAGGTTGATCGAAAAAAATTCAGGTTGTTCATTAGAGGAGCACTGGGGACTTAAGGACGAAGATGTAACCCAGGGGAAAAACGTGGGTTATGGACTCCTGTTCAC
GAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCTTGCACGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAAGATAATCACACAA
GATGGAATTCACTCCTTCCCGACTCTAGGGTAAGTAGAGGTCCATTAGGTCCCACCGGTAGCTCACTTAGGGCGTTGAGGTTATGTCTCGAGCTAGCAAGGGGACCTAAT
GGACCTACAGATCATGGGCTCCAACGAAAACAGAGAAATGTTGTTGAAATGCTATTGAAATGCGACTGCATTTTGCCAAGGCAAATGAAACGCGACTGCATTTCTGCCAA
GGTTGAAGTTAGTGCATGGACAAGGGGTGTCCACTCCTTGACATTGATCCTGAGATAG
Protein sequenceShow/hide protein sequence
MQVQPWQNLGSIREEDIAQNFHANLKGLYFSLVFRTFWGVHVELEAQFGQEEIGYISLFTLSVLRDNDAVVSVGRAPLHRRASKRWLYWVCPTQRRFVMGSPRVNHEEKI
QKELKLAQVSSPIPRLLGLETAQHRNAVPFLGRQCEHHHYGYTGMILRLLEAGDWWESRGSLEGNSLRNISVSTDIDQCRVPLGPGEDGAPLFKSRNQPLREHTSTYPNR
GRSEFHLVLLCSQPPFGLAPEMTKLAGSSGGGVTIVHAHQQATASIACKYVKIIMRTTNRMHCTPRDIMDYAKKNHGINISYDKEWRGRGNALNELKRSPEESYARITAF
AARLIEKNSGCSLEEHWGLKDEDVTQGKNVGYGLLFTRDCPLICMGESGLHADSISLPFWGQDRVGSWEDNHTRWNSLLPDSRVSRGPLGPTGSSLRALRLCLELARGPN
GPTDHGLQRKQRNVVEMLLKCDCILPRQMKRDCISAKVEVSAWTRGVHSLTLILR