| GenBank top hits | e value | %identity | Alignment |
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| KAA0032751.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.9e-22 | 27.46 | Show/hide |
Query: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
+A K I + L++K A + Q++ +E +DEGWT+VTRRKK+K +Q+E +RNY R N +Q K+K K RK KLV EE+ DF ++ VTL DFF
Subjt: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
Query: PKNFLNDDHEDIPEIVACHAVNTCEE-------------------------------------------GDSSSSPS---QNAK----------------
P FL D ++ P +VAC A+N +E SSS+P+ +N++
Subjt: PKNFLNDDHEDIPEIVACHAVNTCEE-------------------------------------------GDSSSSPS---QNAK----------------
Query: -------------KESIEEVDACEVQSKEAYAHPAKSK-------------------------------------------APKEEAS------------
++ +++V+A EA +H A +K + K EAS
Subjt: -------------KESIEEVDACEVQSKEAYAHPAKSK-------------------------------------------APKEEAS------------
Query: --SNVPILRYVPLSRRKKGESPFTEC--------LEILK------------------------------------------------------------K
SN PILRYV LSR KKG+SPF + +E+LK K
Subjt: --SNVPILRYVPLSRRKKGESPFTEC--------LEILK------------------------------------------------------------K
Query: KLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQR
KL +EG+ IP SR GL Y P+ +RITRK KV D++HIT++E+ E+K+ DSQ+ S FDRI R V R
Subjt: KLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQR
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| KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-30 | 28.34 | Show/hide |
Query: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
+A K I + L+++ + Q++ +E +DEGWT+VTRRKK+K +Q+E ++ NYRR N +QK K+K K RK KLV E++ DF +++ VTL DFF
Subjt: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
Query: PKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS-----------------------
P FL D ++ P +VA C +++ +E D+ S+
Subjt: PKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS-----------------------
Query: ---------------------------------PSQN----------AKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
P N A +ES + EA AKS +E +SN PILRYVPLSRRKKGES
Subjt: ---------------------------------PSQN----------AKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
Query: PFTEC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSS
PF E +E+LK KKL +EG+ IP S
Subjt: PFTEC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSS
Query: RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVS
R GLGY PP+P+RITRK KV D++HIT++E+ E+K+ DSQ+ S FDR+ R V +RL +E++ + TS+ RRS F RL+++
Subjt: RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVS
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| KAA0062458.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.5e-24 | 29.86 | Show/hide |
Query: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
+PI++ QQK Q++ E +E+E + W +VT +K+++ +Q + H + + + N+ K+K R+ K +RKPK + ++ DF+ RQ +TL +F P+
Subjt: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
Query: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
FL D E+I E+ ACH V SI EVD +V SKE
Subjt: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
Query: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
D N+ ++ S+FDRIK STTR SV QRL ++ E+E Q TS R S F RLS+
Subjt: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
Query: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
STSKK D PS SVF+RL+ T Q + + KS + + E ND+++ S VPS MKR
Subjt: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
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| TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-26 | 24.29 | Show/hide |
Query: MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRK
++L++ EK + +++ + +P+V+ Q+ A + Q++ +E +DE WT+VTRRKK+K +Q+E +RNYRR N +QK K+K K RK
Subjt: MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRK
Query: PKLVVEENHDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG-------------------------------------------------
KL+ +E+ DF +++ +TL DFFP FL D ++ P +VACHA+N EE
Subjt: PKLVVEENHDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG-------------------------------------------------
Query: ------------------------------------------------------------------------------------------------DSSS
++ S
Subjt: ------------------------------------------------------------------------------------------------DSSS
Query: SPSQNA-----------KKESIEEVDACEV----------------------------QSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
+P A K +S EV + EV + EA AKS +E +SN ILRYVPLSRRKKGESPF
Subjt: SPSQNA-----------KKESIEEVDACEV----------------------------QSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
Query: EC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSSRAG
E +E+LK KKL +EG+ IP SR G
Subjt: EC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSSRAG
Query: LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVSTSKKVDEPS
LGY P+P+RITRK K+ D++HIT++E+ D +K DSQ+ S FDRI R V +RL + +E++ + TS RRS F RLS++ K P
Subjt: LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVSTSKKVDEPS
Query: RSVFDRL-------------------QATYGQCKGKLKSFETEESD------EMNDNNEFSSTVPSRMKRK
+ +RL + ++K E E+ E S VPSRMKRK
Subjt: RSVFDRL-------------------QATYGQCKGKLKSFETEESD------EMNDNNEFSSTVPSRMKRK
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| TYK27425.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.5e-24 | 29.86 | Show/hide |
Query: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
+PI++ QQK Q++ E +E+E + W +VT +K+++ +Q + H + + + N+ K+K R+ K +RKPK + ++ DF+ RQ +TL +F P+
Subjt: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
Query: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
FL D E+I E+ ACH V SI EVD +V SKE
Subjt: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
Query: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
D N+ ++ S+FDRIK STTR SV QRL ++ E+E Q TS R S F RLS+
Subjt: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
Query: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
STSKK D PS SVF+RL+ T Q + + KS + + E ND+++ S VPS MKR
Subjt: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V4E9 Retrotransposon gag protein | 1.2e-24 | 29.86 | Show/hide |
Query: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
+PI++ QQK Q++ E +E+E + W +VT +K+++ +Q + H + + + N+ K+K R+ K +RKPK + ++ DF+ RQ +TL +F P+
Subjt: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
Query: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
FL D E+I E+ ACH V SI EVD +V SKE
Subjt: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
Query: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
D N+ ++ S+FDRIK STTR SV QRL ++ E+E Q TS R S F RLS+
Subjt: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
Query: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
STSKK D PS SVF+RL+ T Q + + KS + + E ND+++ S VPS MKR
Subjt: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
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| A0A5D3BG93 Ty3-gypsy retrotransposon protein | 1.9e-22 | 27.46 | Show/hide |
Query: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
+A K I + L++K A + Q++ +E +DEGWT+VTRRKK+K +Q+E +RNY R N +Q K+K K RK KLV EE+ DF ++ VTL DFF
Subjt: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
Query: PKNFLNDDHEDIPEIVACHAVNTCEE-------------------------------------------GDSSSSPS---QNAK----------------
P FL D ++ P +VAC A+N +E SSS+P+ +N++
Subjt: PKNFLNDDHEDIPEIVACHAVNTCEE-------------------------------------------GDSSSSPS---QNAK----------------
Query: -------------KESIEEVDACEVQSKEAYAHPAKSK-------------------------------------------APKEEAS------------
++ +++V+A EA +H A +K + K EAS
Subjt: -------------KESIEEVDACEVQSKEAYAHPAKSK-------------------------------------------APKEEAS------------
Query: --SNVPILRYVPLSRRKKGESPFTEC--------LEILK------------------------------------------------------------K
SN PILRYV LSR KKG+SPF + +E+LK K
Subjt: --SNVPILRYVPLSRRKKGESPFTEC--------LEILK------------------------------------------------------------K
Query: KLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQR
KL +EG+ IP SR GL Y P+ +RITRK KV D++HIT++E+ E+K+ DSQ+ S FDRI R V R
Subjt: KLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQR
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| A0A5D3BY54 Ty3-gypsy retrotransposon protein | 3.2e-30 | 28.34 | Show/hide |
Query: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
+A K I + L+++ + Q++ +E +DEGWT+VTRRKK+K +Q+E ++ NYRR N +QK K+K K RK KLV E++ DF +++ VTL DFF
Subjt: VAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENHDFVMSRQPVTLKDFF
Query: PKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS-----------------------
P FL D ++ P +VA C +++ +E D+ S+
Subjt: PKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS-----------------------
Query: ---------------------------------PSQN----------AKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
P N A +ES + EA AKS +E +SN PILRYVPLSRRKKGES
Subjt: ---------------------------------PSQN----------AKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
Query: PFTEC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSS
PF E +E+LK KKL +EG+ IP S
Subjt: PFTEC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSS
Query: RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVS
R GLGY PP+P+RITRK KV D++HIT++E+ E+K+ DSQ+ S FDR+ R V +RL +E++ + TS+ RRS F RL+++
Subjt: RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVS
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| A0A5D3C0W6 Ty3-gypsy retrotransposon protein | 5.7e-27 | 24.29 | Show/hide |
Query: MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRK
++L++ EK + +++ + +P+V+ Q+ A + Q++ +E +DE WT+VTRRKK+K +Q+E +RNYRR N +QK K+K K RK
Subjt: MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRK
Query: PKLVVEENHDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG-------------------------------------------------
KL+ +E+ DF +++ +TL DFFP FL D ++ P +VACHA+N EE
Subjt: PKLVVEENHDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG-------------------------------------------------
Query: ------------------------------------------------------------------------------------------------DSSS
++ S
Subjt: ------------------------------------------------------------------------------------------------DSSS
Query: SPSQNA-----------KKESIEEVDACEV----------------------------QSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
+P A K +S EV + EV + EA AKS +E +SN ILRYVPLSRRKKGESPF
Subjt: SPSQNA-----------KKESIEEVDACEV----------------------------QSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
Query: EC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSSRAG
E +E+LK KKL +EG+ IP SR G
Subjt: EC--------LEILK---------------------------------------------------------------------KKLQKEGYVIPSSRAG
Query: LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVSTSKKVDEPS
LGY P+P+RITRK K+ D++HIT++E+ D +K DSQ+ S FDRI R V +RL + +E++ + TS RRS F RLS++ K P
Subjt: LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSVSTSKKVDEPS
Query: RSVFDRL-------------------QATYGQCKGKLKSFETEESD------EMNDNNEFSSTVPSRMKRK
+ +RL + ++K E E+ E S VPSRMKRK
Subjt: RSVFDRL-------------------QATYGQCKGKLKSFETEESD------EMNDNNEFSSTVPSRMKRK
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| A0A5D3DVW2 Retrotransposon gag protein | 1.2e-24 | 29.86 | Show/hide |
Query: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
+PI++ QQK Q++ E +E+E + W +VT +K+++ +Q + H + + + N+ K+K R+ K +RKPK + ++ DF+ RQ +TL +F P+
Subjt: KPIVIWLQQKSARDICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQK-RKIKGLRKPKLVVEENHDFVMSRQPVTLKDFFPKN
Query: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
FL D E+I E+ ACH V SI EVD +V SKE
Subjt: FLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEVDACEVQSKEAYAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECLEILKKKLQ
Query: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
D N+ ++ S+FDRIK STTR SV QRL ++ E+E Q TS R S F RLS+
Subjt: KEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKASTTRLSVHQRLKYSSSEKEGQRKTSAPVRRSVFHRLSV
Query: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
STSKK D PS SVF+RL+ T Q + + KS + + E ND+++ S VPS MKR
Subjt: STSKKVDEPSRSVFDRLQATYGQCKGKLKSFETEESDEMNDNNEFSSTVPSRMKR
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