; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027147 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027147
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold8:4655778..4657697
RNA-Seq ExpressionSpg027147
SyntenySpg027147
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043405.1 hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]1.7e-3947.87Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------RKLLKEGYSLPTTRKGLGYKSPEP
        A KE  + + T   +KGE STS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +  + +K             +KLL+EG+ +P +RKG GYKSPEP
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------RKLLKEGYSLPTTRKGLGYKSPEP

Query:  VRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSV
        + I R+ K KV D+NHITV EVD+ +EKE   QR S F +IRP V R  VF+RLSV +TE +  Q T+S  + S  +RL+M  ++E+        TRPS 
Subjt:  VRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSV

Query:  FQRLSVTTRRD
        F+RLSV  ++D
Subjt:  FQRLSVTTRRD

KAA0047672.1 uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa]3.3e-3846.4Show/hide
Query:  SIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---RKLLKEGYSL---PTT
        SI+ LL   ++  + ++ A ++  +   T    K E STS  K  ++ +E  SN PILRYVPLSR KKGESPF E  + +K    ++LKE +++     T
Subjt:  SIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---RKLLKEGYSL---PTT

Query:  RKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESA
        +KGLGYKSPEP+RITR+GK KV D+NHITV+EVD+ + KE   QRTS F RI P VARA VF+RLS+ E + +  Q T++  R S F+RL++  +EE+  
Subjt:  RKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESA

Query:  FSTSDVTRPSVFQRLSVTTRRD
           S  T+PS F+RLS+T +++
Subjt:  FSTSDVTRPSVFQRLSVTTRRD

KAA0051585.1 uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa]4.7e-3737.04Show/hide
Query:  LSSFSIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------------
        L   S++ LL   ++  + ++ A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +K               
Subjt:  LSSFSIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------------

Query:  --------------------------------------------------------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADT
                                                                      +KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+
Subjt:  --------------------------------------------------------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADT

Query:  NHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
        NHIT++E D+ +EKE   QRTS F RI P VARA VF++LS+ E E +  Q T++  R S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  NHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]4.9e-4245.23Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKR------------------------------------
        A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +KR                                    
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKR------------------------------------

Query:  -------KLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSS
               KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD+ +EKE  +QRTS F RI P VARA VF+RLS+ E + +  Q T++ 
Subjt:  -------KLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSS

Query:  TRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
         R S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  TRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]1.2e-4043.03Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------------------------------
        A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +K                                     
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------------------------------

Query:  ----------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETE
                        +KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD+ +EKE  +QRTS F RI P VARA VF+RLS+ E E
Subjt:  ----------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETE

Query:  EESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
         +  Q T++  + S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  EESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

TrEMBL top hitse value%identityAlignment
A0A5A7TPR5 RNase H domain-containing protein8.4e-4047.87Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------RKLLKEGYSLPTTRKGLGYKSPEP
        A KE  + + T   +KGE STS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +  + +K             +KLL+EG+ +P +RKG GYKSPEP
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------RKLLKEGYSLPTTRKGLGYKSPEP

Query:  VRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSV
        + I R+ K KV D+NHITV EVD+ +EKE   QR S F +IRP V R  VF+RLSV +TE +  Q T+S  + S  +RL+M  ++E+        TRPS 
Subjt:  VRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSV

Query:  FQRLSVTTRRD
        F+RLSV  ++D
Subjt:  FQRLSVTTRRD

A0A5A7UD46 Uncharacterized protein2.3e-3737.04Show/hide
Query:  LSSFSIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------------
        L   S++ LL   ++  + ++ A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +K               
Subjt:  LSSFSIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---------------

Query:  --------------------------------------------------------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADT
                                                                      +KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+
Subjt:  --------------------------------------------------------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADT

Query:  NHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
        NHIT++E D+ +EKE   QRTS F RI P VARA VF++LS+ E E +  Q T++  R S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  NHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

A0A5A7UMY2 Reverse transcriptase domain-containing protein2.4e-4245.23Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKR------------------------------------
        A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +KR                                    
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKR------------------------------------

Query:  -------KLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSS
               KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD+ +EKE  +QRTS F RI P VARA VF+RLS+ E + +  Q T++ 
Subjt:  -------KLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSS

Query:  TRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
         R S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  TRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

A0A5D3C8N8 Ribonuclease H1.6e-3846.4Show/hide
Query:  SIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---RKLLKEGYSL---PTT
        SI+ LL   ++  + ++ A ++  +   T    K E STS  K  ++ +E  SN PILRYVPLSR KKGESPF E  + +K    ++LKE +++     T
Subjt:  SIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK---RKLLKEGYSL---PTT

Query:  RKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESA
        +KGLGYKSPEP+RITR+GK KV D+NHITV+EVD+ + KE   QRTS F RI P VARA VF+RLS+ E + +  Q T++  R S F+RL++  +EE+  
Subjt:  RKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESA

Query:  FSTSDVTRPSVFQRLSVTTRRD
           S  T+PS F+RLS+T +++
Subjt:  FSTSDVTRPSVFQRLSVTTRRD

A0A5D3DXC7 Reverse transcriptase domain-containing protein5.8e-4143.03Show/hide
Query:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------------------------------
        A KE  + + T    K E ST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E  + +K                                     
Subjt:  ARKEAVEDVNTSDLKKGETSTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIK-------------------------------------

Query:  ----------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETE
                        +KLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D+NHITV+EVD+ +EKE  +QRTS F RI P VARA VF+RLS+ E E
Subjt:  ----------------RKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARALVFQRLSVNETE

Query:  EESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD
         +  Q T++  + S F+RL++  +EE+    TS  T+PS F+RLS+T +++
Subjt:  EESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGAGAGGCACTTGAAACTGTCAC
GTGTCACATTGTGGACGTGGTGGAGGATGATGATGTCCCTGCTAGCTCATCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCAC
TTCCTCAGGAAGCTAAAAAGCCACAGGCAGATGCAAGAAAGGAAGCTGTTGAAGATGTGAATACTTCCGACCTGAAAAAGGGTGAAACGTCTACAAGCCTTGTGAAACCT
AAGGTTGTAAAGGATGAGAAGTGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAAA
GAGGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCAAAAGTGGCAG
ACACAAATCATATAACAGTAGAGGAGGTTGATGCCTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTATTTTTAGGCGCATCAGGCCACCGGTTGCTCGTGCTTTA
GTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGTACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCAGTGAGGAAGA
AGAGAGTGCATTTTCAACTTCGGATGTGACTCGGCCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGAGAGGCACTTGAAACTGTCAC
GTGTCACATTGTGGACGTGGTGGAGGATGATGATGTCCCTGCTAGCTCATCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCAC
TTCCTCAGGAAGCTAAAAAGCCACAGGCAGATGCAAGAAAGGAAGCTGTTGAAGATGTGAATACTTCCGACCTGAAAAAGGGTGAAACGTCTACAAGCCTTGTGAAACCT
AAGGTTGTAAAGGATGAGAAGTGTTCAAATTCACCTATCCTACGATACGTCCCCTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAAA
GAGGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCAAAAGTGGCAG
ACACAAATCATATAACAGTAGAGGAGGTTGATGCCTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTATTTTTAGGCGCATCAGGCCACCGGTTGCTCGTGCTTTA
GTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGTACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCAGTGAGGAAGA
AGAGAGTGCATTTTCAACTTCGGATGTGACTCGGCCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAA
Protein sequenceShow/hide protein sequence
MKGSQEKYVSIEDENEGWTLVVRRKKQKQREALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKKPQADARKEAVEDVNTSDLKKGETSTSLVKP
KVVKDEKCSNSPILRYVPLSRRKKGESPFTECSESIKRKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADTNHITVEEVDASKEKESVDQRTSIFRRIRPPVARAL
VFQRLSVNETEEESTQPTNSSTRPSVFRRLSMPSEEEESAFSTSDVTRPSVFQRLSVTTRRDKKE