; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027173 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027173
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold8:8908030..8914879
RNA-Seq ExpressionSpg027173
SyntenySpg027173
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.8e-1257.32Show/hide
Query:  EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        EE RG       KS     +S      +++ PRGNR +L T +L KTVEIELPVPDTLPTSAESS+S+SSTW+ELY ESVH+
Subjt:  EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]1.0e-1281.13Show/hide
Query:  LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        +WPRGNR SLQTREL KT  IELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Subjt:  LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.6e-1328.69Show/hide
Query:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN
        ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +   +   VRG  VS+S   I  V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN

Query:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG
                                            P+AK     LK                      M+  K IN+G +I  EI +C  ++   LFF 
Subjt:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG

Query:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQ
        SLIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.3e-1826.78Show/hide
Query:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN
        ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +   +   VRG  VS+S   I  V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN

Query:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG
                                            P+AK     LK                      M+  K IN+G +I  EI +C  ++   LFF 
Subjt:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG

Query:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN--NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW
        SLIT+LC+  +     +EE+      ID   + ++ Q       +  +S   AT     T     +         S + +    +   L     + + +W
Subjt:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN--NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW

Query:  VYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP----QEEKESDEDEEDE
         Y+KERD A+++   +      P FP FPQ +L     + E ESD+D  +E
Subjt:  VYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP----QEEKESDEDEEDE

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]3.3e-1478.18Show/hide
Query:  VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        +N+WPRGNR S QT +L KTVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Subjt:  VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.7e-1328.69Show/hide
Query:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN
        ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +   +   VRG  VS+S   I  V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN

Query:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG
                                            P+AK     LK                      M+  K IN+G +I  EI +C  ++   LFF 
Subjt:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG

Query:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQ
        SLIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQ

A0A2P5BCG4 Uncharacterized protein (Fragment)4.0e-1826.78Show/hide
Query:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN
        ++ R    EKGF    S  +G LP F+ +VITQ+ W++FCAHP++ +VPLVREFY  L +   +   VRG  VS+S   I  V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDIIRVYRIKAPLHPRGNDAIKN

Query:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG
                                            P+AK     LK                      M+  K IN+G +I  EI +C  ++   LFF 
Subjt:  ------------------------------------PSAKQMKEALK----------------------MVANKGINIGSIIREEILSCGRKRARKLFFG

Query:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN--NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW
        SLIT+LC+  +     +EE+      ID   + ++ Q       +  +S   AT     T     +         S + +    +   L     + + +W
Subjt:  SLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQN--NAQRKDKASISQATPPPGLTLASPPEHTPISWSTPSSEALA--FVFRQLDRIEDKLKAYW

Query:  VYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP----QEEKESDEDEEDE
         Y+KERD A+++   +      P FP FPQ +L     + E ESD+D  +E
Subjt:  VYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLP----QEEKESDEDEEDE

A0A5A7UAH6 CCHC-type domain-containing protein8.6e-1357.32Show/hide
Query:  EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        EE RG       KS     +S      +++ PRGNR +L T +L KTVEIELPVPDTLPTSAESS+S+SSTW+ELY ESVH+
Subjt:  EEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

A0A5D3BET3 Uncharacterized protein1.6e-1478.18Show/hide
Query:  VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        +N+WPRGNR S QT +L KTVEIELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Subjt:  VNLWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

A0A5D3DWP3 Uncharacterized protein5.1e-1381.13Show/hide
Query:  LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        +WPRGNR SLQTREL KT  IELPVPDTLPTSAESS S+SSTW+ELY ESVH+
Subjt:  LWPRGNRSSLQTRELAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACGCCGAAATCATCCTCATCTCGCAAGATCACTCGATCTCAGAGTGTTCAACGTGTCCAGAATACTGAACAAGGTGCTCGACACCAAGAAGAGCAGCCCGA
ACCTACCATGCACGACACGAGAAGAGCGAGACCCACGGGTTTCTCACCGGCGGCTGTAGACCAAGGAACCAACGTTGAAACTCCTTCTTCCTCGACAATGCCAGCCACTT
TGAGGGAGAATCCGAGTAGTTCTCATCCAAGAAGGTCCACACGCACCGATTCCCTCCACAAAATCCAAAAACCTGCGGGCCAATTGTTGAGGAAACACTCGAGGGAATTG
GATAGGCCTTTTGTTACTTACAGTGCAAGAAAAAAAGAGTCAAAGAAGGCTTCACCTGAAAAGCCGCTTATTATCGAGCCCCTCAAAGTAGCTAGAATGTCGCTGGATGT
GTTCGAAGAGATGATTCAACAGGCCGTTGCACAAGCCCTCATTACTGCCGAAGGTTACAGGGCTGAGCAAGATGCACTGAGGGAGATAATGGCTGAAAAAGAGAGGGAAA
ACCAGACCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGTGGAACAGCTGCAAGAAATTGAAAAAGAGGCCCTTAAAGGGCCAAGAAGGCCAGGAAAGGCCACTGAAGAA
GGCCAAGCTGATGAGACCCTTGATCCTCTATTTGAGTATGATGTGAGAGGACCTCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAAAGACGAAGAGGAAGTTGA
AAAAGAGGAGGCTGAGACCTCCAGTGATTCAAAGACCGAATCAAATTCTAAAATCAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTTAGGAAGAAAAGAA
GAAGAGAATTGAGAGCCGAGAGGAGGACGAAAAACAAAAATGACCCCATCTTTGCTAAGAGGTCGAGGACAAGATCCATGGACGCCTCTCCTGCAGTTCCTCTTACCATC
TCTCCTGCCAAGCCAAAAGTCAAATTACCTAAAGCTCAATCACCAAAGAATCCGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAGATTATGAGAAA
AAGAGACTTCCTGAACGAAAAGGGATTCTCCAACAGAGTAGGGACCTTGCCAGATTTTGTTACTAAAGTCATTACCCAATACAAGTGGCAGGAGTTCTGTGCTCACCCTC
AGGAGGTCGTGGTGCCTTTAGTTCGAGAATTCTATGATGGATTGAGGGAGGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTCTCTTCTGTCGACATC
ATTAGGGTGTACAGGATCAAAGCACCTTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACAGATGAAAGAAGCATTGAAGATGGTGGCCAACAAAGG
TATAAATATTGGGAGCATCATCAGGGAGGAGATCCTTTCATGTGGGAGGAAGAGAGCAAGGAAACTGTTCTTTGGGTCACTTATCACCCAACTATGCCAGAGGGTAAAAA
TCGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCGACCATTGATCTACCTCTAATCGGGAAGCTTCAACAGAATAATGCCCAAAGAAAGGACAAGGCTTCCATT
TCCCAAGCTACTCCACCACCAGGGTTGACACTAGCTTCACCTCCTGAGCACACTCCTATTTCATGGTCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCT
AGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCGAGCATCGCCCCCGTGTTCC
CTAACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATCTGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGGACAAGGAATATGGGAGTTTTTCTGATCCC
CTTTATCCACTGTTTTTAAAAACAGAGGAAGCTGGAAAAACCCTAAAATGCGACCGCATTTCTGGGAAGGCCAAATCCAAATGCGACCGCATTTCTGGGCAAACAGAGGC
AGTTCCGAGTCTGCCGCGGGTTGTTTTGAAAGAGACTATTGCGCACCTAACCGGCCAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTG
AGGTTGAAGAAGATAGGAAAAGCTCATGCATAGCCAGCTACAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAA
CTAGCTAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGT
CCATATTGTAAATGTTTTGTTCAACGTTCTAGGAGGGTCAACG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACGCCGAAATCATCCTCATCTCGCAAGATCACTCGATCTCAGAGTGTTCAACGTGTCCAGAATACTGAACAAGGTGCTCGACACCAAGAAGAGCAGCCCGA
ACCTACCATGCACGACACGAGAAGAGCGAGACCCACGGGTTTCTCACCGGCGGCTGTAGACCAAGGAACCAACGTTGAAACTCCTTCTTCCTCGACAATGCCAGCCACTT
TGAGGGAGAATCCGAGTAGTTCTCATCCAAGAAGGTCCACACGCACCGATTCCCTCCACAAAATCCAAAAACCTGCGGGCCAATTGTTGAGGAAACACTCGAGGGAATTG
GATAGGCCTTTTGTTACTTACAGTGCAAGAAAAAAAGAGTCAAAGAAGGCTTCACCTGAAAAGCCGCTTATTATCGAGCCCCTCAAAGTAGCTAGAATGTCGCTGGATGT
GTTCGAAGAGATGATTCAACAGGCCGTTGCACAAGCCCTCATTACTGCCGAAGGTTACAGGGCTGAGCAAGATGCACTGAGGGAGATAATGGCTGAAAAAGAGAGGGAAA
ACCAGACCTTTGAGCCATTGCACAAGGCTCAAAGTGAGGTGGAACAGCTGCAAGAAATTGAAAAAGAGGCCCTTAAAGGGCCAAGAAGGCCAGGAAAGGCCACTGAAGAA
GGCCAAGCTGATGAGACCCTTGATCCTCTATTTGAGTATGATGTGAGAGGACCTCCACCAGCTGCTGATAGCACCTCTTCGGGAGAGAAGAAAGACGAAGAGGAAGTTGA
AAAAGAGGAGGCTGAGACCTCCAGTGATTCAAAGACCGAATCAAATTCTAAAATCAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTTAGGAAGAAAAGAA
GAAGAGAATTGAGAGCCGAGAGGAGGACGAAAAACAAAAATGACCCCATCTTTGCTAAGAGGTCGAGGACAAGATCCATGGACGCCTCTCCTGCAGTTCCTCTTACCATC
TCTCCTGCCAAGCCAAAAGTCAAATTACCTAAAGCTCAATCACCAAAGAATCCGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAGATTATGAGAAA
AAGAGACTTCCTGAACGAAAAGGGATTCTCCAACAGAGTAGGGACCTTGCCAGATTTTGTTACTAAAGTCATTACCCAATACAAGTGGCAGGAGTTCTGTGCTCACCCTC
AGGAGGTCGTGGTGCCTTTAGTTCGAGAATTCTATGATGGATTGAGGGAGGAGAGCATGAGCATGGCAGTGGTGAGAGGTAAGATGGTCAGTTTCTCTTCTGTCGACATC
ATTAGGGTGTACAGGATCAAAGCACCTTTGCATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGCCAAACAGATGAAAGAAGCATTGAAGATGGTGGCCAACAAAGG
TATAAATATTGGGAGCATCATCAGGGAGGAGATCCTTTCATGTGGGAGGAAGAGAGCAAGGAAACTGTTCTTTGGGTCACTTATCACCCAACTATGCCAGAGGGTAAAAA
TCGTTCCTGGGAAAGATGAGGAACGACACTTTTTCAAGCCGACCATTGATCTACCTCTAATCGGGAAGCTTCAACAGAATAATGCCCAAAGAAAGGACAAGGCTTCCATT
TCCCAAGCTACTCCACCACCAGGGTTGACACTAGCTTCACCTCCTGAGCACACTCCTATTTCATGGTCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCT
AGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCGAGCATCGCCCCCGTGTTCC
CTAACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATCTGATGAAGATGAAGAAGATGAAAGAGAGAGTTCCTCGGACAAGGAATATGGGAGTTTTTCTGATCCC
CTTTATCCACTGTTTTTAAAAACAGAGGAAGCTGGAAAAACCCTAAAATGCGACCGCATTTCTGGGAAGGCCAAATCCAAATGCGACCGCATTTCTGGGCAAACAGAGGC
AGTTCCGAGTCTGCCGCGGGTTGTTTTGAAAGAGACTATTGCGCACCTAACCGGCCAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTG
AGGTTGAAGAAGATAGGAAAAGCTCATGCATAGCCAGCTACAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGGAA
CTAGCTAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCCGT
CCATATTGTAAATGTTTTGTTCAACGTTCTAGGAGGGTCAACG
Protein sequenceShow/hide protein sequence
MKNTPKSSSSRKITRSQSVQRVQNTEQGARHQEEQPEPTMHDTRRARPTGFSPAAVDQGTNVETPSSSTMPATLRENPSSSHPRRSTRTDSLHKIQKPAGQLLRKHSREL
DRPFVTYSARKKESKKASPEKPLIIEPLKVARMSLDVFEEMIQQAVAQALITAEGYRAEQDALREIMAEKERENQTFEPLHKAQSEVEQLQEIEKEALKGPRRPGKATEE
GQADETLDPLFEYDVRGPPPAADSTSSGEKKDEEEVEKEEAETSSDSKTESNSKIKELDDDQIPISAAFRKKRRRELRAERRTKNKNDPIFAKRSRTRSMDASPAVPLTI
SPAKPKVKLPKAQSPKNPFPEVFKDVNFQEKMEIMRKRDFLNEKGFSNRVGTLPDFVTKVITQYKWQEFCAHPQEVVVPLVREFYDGLREESMSMAVVRGKMVSFSSVDI
IRVYRIKAPLHPRGNDAIKNPSAKQMKEALKMVANKGINIGSIIREEILSCGRKRARKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLPLIGKLQQNNAQRKDKASI
SQATPPPGLTLASPPEHTPISWSTPSSEALAFVFRQLDRIEDKLKAYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEEKESDEDEEDERESSSDKEYGSFSDP
LYPLFLKTEEAGKTLKCDRISGKAKSKCDRISGQTEAVPSLPRVVLKETIAHLTGQHLRERVKEEEEEEFRGFEVEEDRKSSCIASYSRIWVQPVNLWPRGNRSSLQTRE
LAKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVLGGST