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Spg027174 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027174
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRoot meristem growth factor 9
Genome locationscaffold8:8991831..8995076
RNA-Seq ExpressionSpg027174
SyntenySpg027174
Gene Ontology termsGO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571378.1 hypothetical protein SDJN03_30293, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1968.75Show/hide
Query:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN
        MV+K +A+SCN  LQLL FIFLFFLL+T TGSS GRRL E TSR +E+ LVENH G L  GNDLVTM YT A+ NRP+HN
Subjt:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN

KAG6605283.1 hypothetical protein SDJN03_02600, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0954.41Show/hide
Query:  LLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN
        LL  LA +FLF LL+T   S   R L EKT   +ED LV +HGGALEN +  + MDYTP++ NRP+HN
Subjt:  LLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN

KAG6605284.1 hypothetical protein SDJN03_02601, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1256.79Show/hide
Query:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN
        MV KA+ LSC RLL+LL  +FLF LL+TT GS     L EKT  ++ED L   +HGGALEN  DL  MDYTPA  + P+HN
Subjt:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN

KAG6605285.1 hypothetical protein SDJN03_02602, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1767.5Show/hide
Query:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN
        MV KA+ LS  RLL+LL+ +FLF LLITTTGS  GR L EKT  ++ED L    GG LEN NDLVTMDYTPA KNRPIHN
Subjt:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN

KGN62099.1 hypothetical protein Csa_006414 [Cucumis sativus]7.6e-1870Show/hide
Query:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN
        +++K  A SCN LLQLLAFIFLFFLLITTTGSSA R L E  SR  +D  V+NH G +  GNDLVTMDYTPARKN PIHN
Subjt:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LM46 Uncharacterized protein3.7e-1870Show/hide
Query:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN
        +++K  A SCN LLQLLAFIFLFFLLITTTGSSA R L E  SR  +D  V+NH G +  GNDLVTMDYTPARKN PIHN
Subjt:  MVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN

A0A151TL92 Uncharacterized protein6.7e-0446.25Show/hide
Query:  ALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQE-----KTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN
        A+S N+ L L+AF+ L F  ITTT  +  R L+E     K  +A  D++ + NH GA E+ ++L TMDYTPA++N PIHN
Subjt:  ALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQE-----KTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN

A0A371FMN6 Root meristem growth factor 9 (Fragment)5.1e-0441.33Show/hide
Query:  ALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN
        A+S N+ L L+AF+ L F+ IT    +  R +++   +  + SL + NH GA +  ++L TMDYTPA++N PIHN
Subjt:  ALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN

A0A445KQA8 Uncharacterized protein1.6e-0534.78Show/hide
Query:  TNLPLVAREIQMVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN
        T+   + + +Q + K  A+S N+ L L+AF+ L F+ +T +  S      +   ++ + S  + NH GA ++ ++L TMDYTPA++N PIHN
Subjt:  TNLPLVAREIQMVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN

K7KR36 Uncharacterized protein1.6e-0534.78Show/hide
Query:  TNLPLVAREIQMVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN
        T+   + + +Q + K  A+S N+ L L+AF+ L F+ +T +  S      +   ++ + S  + NH GA ++ ++L TMDYTPA++N PIHN
Subjt:  TNLPLVAREIQMVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVE-NHGGALENGNDLVTMDYTPARKNRPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAAGGAGCTGACAAGGACAACCCGACACGAGCCTAAAAATAGGACCGGAAGATGGACCCCGGAGGCGAAACGGGCCAAAAGGTTGGGCCAAGGTCGGAGGGACCA
GGCCTTGGCCCGACCCATATGGTCGGCCGAATCCGTCCGCCTCCATTTGGTCCCTGCTGCACCTGGTCGCCTTGGTTCCACCTGGTTCAGCCCGAAACGCCTCCGAATGC
CTAAAAACTCTAGAGCAGGAACAACATCAGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTTCCTTGTCTTGCAGGCCACGTCTTCCCCCCTCAAACAAATTTA
CCGTTGGTGGCACGTGAAATTCAGATGGTTCAGAAAGCAGCAGCACTCTCATGCAATCGCCTACTTCAGCTGTTGGCCTTCATCTTTCTTTTCTTTCTACTCATCACTAC
CACAGGTTCTTCGGCTGGACGGAGGTTGCAAGAAAAGACGAGCCGAGCCAAGGAGGATTCGCTCGTCGAAAACCATGGTGGAGCGTTGGAAAACGGAAATGACTTAGTGA
CAATGGATTATACTCCAGCAAGGAAGAACCGTCCAATTCATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACAAGGAGCTGACAAGGACAACCCGACACGAGCCTAAAAATAGGACCGGAAGATGGACCCCGGAGGCGAAACGGGCCAAAAGGTTGGGCCAAGGTCGGAGGGACCA
GGCCTTGGCCCGACCCATATGGTCGGCCGAATCCGTCCGCCTCCATTTGGTCCCTGCTGCACCTGGTCGCCTTGGTTCCACCTGGTTCAGCCCGAAACGCCTCCGAATGC
CTAAAAACTCTAGAGCAGGAACAACATCAGAGGCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTTTCCTTGTCTTGCAGGCCACGTCTTCCCCCCTCAAACAAATTTA
CCGTTGGTGGCACGTGAAATTCAGATGGTTCAGAAAGCAGCAGCACTCTCATGCAATCGCCTACTTCAGCTGTTGGCCTTCATCTTTCTTTTCTTTCTACTCATCACTAC
CACAGGTTCTTCGGCTGGACGGAGGTTGCAAGAAAAGACGAGCCGAGCCAAGGAGGATTCGCTCGTCGAAAACCATGGTGGAGCGTTGGAAAACGGAAATGACTTAGTGA
CAATGGATTATACTCCAGCAAGGAAGAACCGTCCAATTCATAATTAG
Protein sequenceShow/hide protein sequence
MYKELTRTTRHEPKNRTGRWTPEAKRAKRLGQGRRDQALARPIWSAESVRLHLVPAAPGRLGSTWFSPKRLRMPKNSRAGTTSEAVWQAPHRCAGFPCLAGHVFPPQTNL
PLVAREIQMVQKAAALSCNRLLQLLAFIFLFFLLITTTGSSAGRRLQEKTSRAKEDSLVENHGGALENGNDLVTMDYTPARKNRPIHN