; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027176 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027176
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold8:6452408..6453980
RNA-Seq ExpressionSpg027176
SyntenySpg027176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]6.4e-1428.18Show/hide
Query:  FVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDF
        FV++ A+  Y  +  R   FE GF      + +L   +   +T  +W +F   P PVN+ +V EFY NI E      +V G+++ ++P A+N  F LQ  
Subjt:  FVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDF

Query:  PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV
                A    +E     + ++ + G +W   + +++T     L      W  F+K  L+PT+H++TVS  R+LL   +
Subjt:  PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]4.1e-1322.19Show/hide
Query:  IAEAPAETEEPRLPYDRFVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVA
        +   PA T+   + + +F ND A+A++     R+  FE GF             +   +   +W +F   P  VN+++V EFY NI +       V G  
Subjt:  IAEAPAETEEPRLPYDRFVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVA

Query:  VDWSPDAVNSLFNLQDF--PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL-----
        + ++  A+N  F+LQ+    HA + E A    + + +  + ++  E  +W   +T + +     L+  A  W  F+K  L+PT+H++TVS  R+L     
Subjt:  VDWSPDAVNSLFNLQDF--PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL-----

Query:  -----------------------------------LCQRVGVPMSADDVILMDKGIIDKPNLARLLRIQEAR-------------QGGLVCGILKIQEQL
                                           LC++  V  +A D IL     I +  L  LL ++  +             +      +L ++E +
Subjt:  -----------------------------------LCQRVGVPMSADDVILMDKGIIDKPNLARLLRIQEAR-------------QGGLVCGILKIQEQL

Query:  QMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGD
            +++       + F+ YVK RD  +    Q          P FPD++L  +    S E E D
Subjt:  QMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGD

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.2e-1535Show/hide
Query:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL
        +F  + A  +Y   ++ R    E+GF  D       LP F+   IT   W QFCA PE     +V EFY N+ +       V GV V WS +A+N++F L
Subjt:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL

Query:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLL
         D P   ++E     +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS DR+LL
Subjt:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.6e-2529Show/hide
Query:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL
        +F  + A  +Y   ++ R    E+GF  D       LP F+   IT   W QFCA PE     +V EFY N+ + E     V GV V WS +A+N++F L
Subjt:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL

Query:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL---------------------
         D P   ++E     + + L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS DR+L                     
Subjt:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL---------------------

Query:  -------------------LCQRVGVPMSADDVILMDKGIID-----------------KPNLARLLRIQEARQGGLVCGILKI-------QEQLQMH-S
                           LC+    P   ++  L + G ID                 +P+ +R       R  G +   LK        QE  Q H  
Subjt:  -------------------LCQRVGVPMSADDVILMDKGIID-----------------KPNLARLLRIQEARQGGLVCGILKI-------QEQLQMH-S

Query:  SRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE
        S ++   +Q Q FW Y K RD AL++ALQ+NF +P PT P FP ++L         E E + ++D   E
Subjt:  SRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.0e-1929.39Show/hide
Query:  VVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLC
        +V EFY N+ + E     V GV V WS +A+N++F L D P   ++E     +  +L   +  V   GA+W +S     T   + L   A  W  F+K  
Subjt:  VVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLC

Query:  LLPTTHDSTVSHDRVLL------------------------CQRVG--------------VPMSADDVILMDKGIID-----------------KPNLAR
        LLPTTH   VS DR+LL                         Q+ G               P   ++  L + G ID                 +P+ +R
Subjt:  LLPTTHDSTVSHDRVLL------------------------CQRVG--------------VPMSADDVILMDKGIID-----------------KPNLAR

Query:  LLRIQEARQGGLVCGILKIQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE
              +R  G V   LK  EQ     S+ E   +Q Q FW Y K RD AL++ALQ+NF +P PT P FP ++L         E E + ++D   E
Subjt:  LLRIQEARQGGLVCGILKIQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.6e-1635Show/hide
Query:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL
        +F  + A  +Y   ++ R    E+GF  D       LP F+   IT   W QFCA PE     +V EFY N+ +       V GV V WS +A+N++F L
Subjt:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL

Query:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLL
         D P   ++E     +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS DR+LL
Subjt:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-2529Show/hide
Query:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL
        +F  + A  +Y   ++ R    E+GF  D       LP F+   IT   W QFCA PE     +V EFY N+ + E     V GV V WS +A+N++F L
Subjt:  RFVNDLARAKYLEMLK-RDFLFERGFSDD-------LPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNL

Query:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL---------------------
         D P   ++E     + + L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS DR+L                     
Subjt:  QDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVL---------------------

Query:  -------------------LCQRVGVPMSADDVILMDKGIID-----------------KPNLARLLRIQEARQGGLVCGILKI-------QEQLQMH-S
                           LC+    P   ++  L + G ID                 +P+ +R       R  G +   LK        QE  Q H  
Subjt:  -------------------LCQRVGVPMSADDVILMDKGIID-----------------KPNLARLLRIQEARQGGLVCGILKI-------QEQLQMH-S

Query:  SRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE
        S ++   +Q Q FW Y K RD AL++ALQ+NF +P PT P FP ++L         E E + ++D   E
Subjt:  SRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE

A0A2P5DXM3 Uncharacterized protein2.4e-1929.39Show/hide
Query:  VVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLC
        +V EFY N+ + E     V GV V WS +A+N++F L D P   ++E     +  +L   +  V   GA+W +S     T   + L   A  W  F+K  
Subjt:  VVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLC

Query:  LLPTTHDSTVSHDRVLL------------------------CQRVG--------------VPMSADDVILMDKGIID-----------------KPNLAR
        LLPTTH   VS DR+LL                         Q+ G               P   ++  L + G ID                 +P+ +R
Subjt:  LLPTTHDSTVSHDRVLL------------------------CQRVG--------------VPMSADDVILMDKGIID-----------------KPNLAR

Query:  LLRIQEARQGGLVCGILKIQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE
              +R  G V   LK  EQ     S+ E   +Q Q FW Y K RD AL++ALQ+NF +P PT P FP ++L         E E + ++D   E
Subjt:  LLRIQEARQGGLVCGILKIQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQE

A0A6A2ZUE4 Uncharacterized protein3.1e-1428.18Show/hide
Query:  FVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDF
        FV++ A+  Y  +  R   FE GF      + +L   +   +T  +W +F   P PVN+ +V EFY NI E      +V G+++ ++P A+N  F LQ  
Subjt:  FVNDLARAKYLEMLKRDFLFERGF------SDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDF

Query:  PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV
                A    +E     + ++ + G +W   + +++T     L      W  F+K  L+PT+H++TVS  R+LL   +
Subjt:  PHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV

W9QTD9 Uncharacterized protein2.6e-1331.48Show/hide
Query:  PHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLS
        P F+   I    W QFC  P      +V EFY N+ +       V  V V ++  A+NS+F L++     Y + A+  ++EQL   + EV IEGA W++S
Subjt:  PHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQDFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLS

Query:  KTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV--GVPMSADDVILMD
             T     LK  A  W  F+    +P+TH  TV+ DRVLL   +  G+ ++ +++ + +
Subjt:  KTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRV--GVPMSADDVILMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATATTGAGGAAGAGGAAGTGCCGATTACACCTGAGGCATCGAAGACAAGAACGAAGAGAAGGAAAACACCAGAAGAAAG
AGAGGCTAAGAGACGAAGAAGGCAACAACGAGCTGAGGTTGCAAAAGTAGTACAGAAAGTGGTCGAAGACATTGCTGAAGAAACGGTTGAGGAAGAACAACCAAAAGACC
CTGAAGAAAAGAAAGATTTGGAACAAGAAGAACAGACACAAGAGAAAGAAGAGGCTGAGAAGAAAACGGAAGAAGAAGCTCTGACAAAGCAACAAAAGGACAAGGGCAAA
GGCATTGCTGAAGCACCGGCAGAAACCGAGGAACCGAGGCTGCCGTATGATCGCTTCGTCAACGATCTTGCCCGAGCAAAATATTTAGAGATGTTGAAGAGGGATTTTCT
GTTTGAGCGAGGATTCAGTGATGACCTACCGCATTTCTTACGAGCTAGAATTACAAATGACAGATGGGATCAGTTCTGCGCGAAACCAGAGCCGGTGAATTCAAATGTTG
TTTGTGAATTTTATGAGAACATAGATGAAGACGAAGGGTTTCAAGCAATTGTTCATGGGGTAGCAGTAGACTGGAGCCCCGATGCGGTAAATTCTTTATTTAACCTTCAA
GATTTCCCACATGCCGGGTATAATGAGATGGCGACAGCGCCATCCAATGAGCAATTGAATGCAGATGTTCGAGAGGTGAGAATTGAGGGGGCCCAGTGGCGTTTGTCGAA
GACAGAAAAGAGGACCTTCCAGGCGACTTATCTCAAGAGTGAGGCCAACACTTGGTTGGGATTCATCAAACTGTGTCTACTGCCAACAACCCACGACTCTACTGTCTCCC
ATGATCGAGTTCTTCTGTGTCAAAGAGTTGGGGTTCCCATGAGTGCAGACGACGTTATTCTGATGGATAAGGGAATAATAGACAAGCCAAACCTGGCAAGGCTTCTAAGG
ATTCAAGAGGCGCGCCAAGGCGGTTTGGTGTGTGGCATCCTCAAAATTCAAGAACAACTGCAAATGCATTCCAGTAGAATGGAGTTTGCCGAAAGGCAATTCCAAACTTT
CTGGAATTATGTTAAACGAAGGGATGCCGCATTGAGGAGGGCCTTGCAATCTAATTTTTTCAAGCCTTATCCAACCATTCCTATATTCCCTGATGATCTATTGAACCCTT
GGATCCCACCACCGTCGATAGAAAGAGAAGGAGATGAGGAGGAGGATGCTGGTCAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATATTGAGGAAGAGGAAGTGCCGATTACACCTGAGGCATCGAAGACAAGAACGAAGAGAAGGAAAACACCAGAAGAAAG
AGAGGCTAAGAGACGAAGAAGGCAACAACGAGCTGAGGTTGCAAAAGTAGTACAGAAAGTGGTCGAAGACATTGCTGAAGAAACGGTTGAGGAAGAACAACCAAAAGACC
CTGAAGAAAAGAAAGATTTGGAACAAGAAGAACAGACACAAGAGAAAGAAGAGGCTGAGAAGAAAACGGAAGAAGAAGCTCTGACAAAGCAACAAAAGGACAAGGGCAAA
GGCATTGCTGAAGCACCGGCAGAAACCGAGGAACCGAGGCTGCCGTATGATCGCTTCGTCAACGATCTTGCCCGAGCAAAATATTTAGAGATGTTGAAGAGGGATTTTCT
GTTTGAGCGAGGATTCAGTGATGACCTACCGCATTTCTTACGAGCTAGAATTACAAATGACAGATGGGATCAGTTCTGCGCGAAACCAGAGCCGGTGAATTCAAATGTTG
TTTGTGAATTTTATGAGAACATAGATGAAGACGAAGGGTTTCAAGCAATTGTTCATGGGGTAGCAGTAGACTGGAGCCCCGATGCGGTAAATTCTTTATTTAACCTTCAA
GATTTCCCACATGCCGGGTATAATGAGATGGCGACAGCGCCATCCAATGAGCAATTGAATGCAGATGTTCGAGAGGTGAGAATTGAGGGGGCCCAGTGGCGTTTGTCGAA
GACAGAAAAGAGGACCTTCCAGGCGACTTATCTCAAGAGTGAGGCCAACACTTGGTTGGGATTCATCAAACTGTGTCTACTGCCAACAACCCACGACTCTACTGTCTCCC
ATGATCGAGTTCTTCTGTGTCAAAGAGTTGGGGTTCCCATGAGTGCAGACGACGTTATTCTGATGGATAAGGGAATAATAGACAAGCCAAACCTGGCAAGGCTTCTAAGG
ATTCAAGAGGCGCGCCAAGGCGGTTTGGTGTGTGGCATCCTCAAAATTCAAGAACAACTGCAAATGCATTCCAGTAGAATGGAGTTTGCCGAAAGGCAATTCCAAACTTT
CTGGAATTATGTTAAACGAAGGGATGCCGCATTGAGGAGGGCCTTGCAATCTAATTTTTTCAAGCCTTATCCAACCATTCCTATATTCCCTGATGATCTATTGAACCCTT
GGATCCCACCACCGTCGATAGAAAGAGAAGGAGATGAGGAGGAGGATGCTGGTCAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MAKTRGRRERDIEEEEVPITPEASKTRTKRRKTPEEREAKRRRRQQRAEVAKVVQKVVEDIAEETVEEEQPKDPEEKKDLEQEEQTQEKEEAEKKTEEEALTKQQKDKGK
GIAEAPAETEEPRLPYDRFVNDLARAKYLEMLKRDFLFERGFSDDLPHFLRARITNDRWDQFCAKPEPVNSNVVCEFYENIDEDEGFQAIVHGVAVDWSPDAVNSLFNLQ
DFPHAGYNEMATAPSNEQLNADVREVRIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSHDRVLLCQRVGVPMSADDVILMDKGIIDKPNLARLLR
IQEARQGGLVCGILKIQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRRALQSNFFKPYPTIPIFPDDLLNPWIPPPSIEREGDEEEDAGQED