; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027185 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027185
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold8:4589649..4594574
RNA-Seq ExpressionSpg027185
SyntenySpg027185
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]2.8e-2348.28Show/hide
Query:  TFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLR
        +FS+GF  +L+++E T++ +LL+L+DG + + +RRDVR  + +PS GF CKS F  L++PSP  + VF  + + K  KKV FF WQV+LGRV   DRL+R
Subjt:  TFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLR

Query:  VKAPMVGPFCCMLCRK
         +  ++ PFCC+LCRK
Subjt:  VKAPMVGPFCCMLCRK

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]4.5e-2141.67Show/hide
Query:  MKYRTVADILGLVGSSTTFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFF
        +K   +AD L   G+S +FSFGF R+LSDRET++++ L+SL++  S R  RRDV  WS  P  GF CKSFFQ LVN +P  +SV S +W++K  +K + F
Subjt:  MKYRTVADILGLVGSSTTFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFF

Query:  AWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN
        +WQV                              EE+LDHLLW+
Subjt:  AWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]7.0e-2253.06Show/hide
Query:  LRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN
        L    R+V  WS +PS GFS KS F  L++PSP R+ VF  +W++K  KKV FF WQV+L R N  DRL+R   P     CC+LCRKA+E+LDHLLW+
Subjt:  LRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN

XP_008464727.1 PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]2.8e-2347.86Show/hide
Query:  RSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVG
        R  S +E T + +LLS + G S R  RRD+  W+ +PS GF   S F  L++P+P ++ VF  +W     KKV+FF WQV+L +VN  DRL+R +  +VG
Subjt:  RSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVG

Query:  PFCCMLCRKAEENLDHL
         FCCMLC+KAE +LDHL
Subjt:  PFCCMLCRKAEENLDHL

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.8e-2233.18Show/hide
Query:  LSFWNPWKDISMELPSFSDFVHHVVGDGNDTYFWEDRWSGDRPLNLTFPHLFHLSSMKNHKVVDVLSHSGSSPSLSFRFRRALSDRESTEVTTLLSLIEE
        +S +NPWK I+   P FS  +   VGDG + YFWED W G++PL+L FP ++ LS  K   V +VL+      S+S    R+L+D ES E+  LL L+  
Subjt:  LSFWNPWKDISMELPSFSDFVHHVVGDGNDTYFWEDRWSGDRPLNLTFPHLFHLSSMKNHKVVDVLSHSGSSPSLSFRFRRALSDRESTEVTTLLSLIEE

Query:  FEFRWERRDIRCWSPSPSEGFSCILLPIVIPFSLFCGRRRKTWILLWRCDFAHSAWSLFFESFAK-------QMVDYPDVRGMIEEFLLHPTFSNKGRFL
              R D+R W P+P  GFSC        F +       +++       + S  + +F S  K       +   +  ++G     ++ P F N+GRFL
Subjt:  FEFRWERRDIRCWSPSPSEGFSCILLPIVIPFSLFCGRRRKTWILLWRCDFAHSAWSLFFESFAK-------QMVDYPDVRGMIEEFLLHPTFSNKGRFL

Query:  WQVDMCALLCG
        WQ    A L G
Subjt:  WQVDMCALLCG

TrEMBL top hitse value%identityAlignment
A0A1S3CMM8 uncharacterized protein LOC1035025431.4e-2347.86Show/hide
Query:  RSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVG
        R  S +E T + +LLS + G S R  RRD+  W+ +PS GF   S F  L++P+P ++ VF  +W     KKV+FF WQV+L +VN  DRL+R +  +VG
Subjt:  RSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVG

Query:  PFCCMLCRKAEENLDHL
         FCCMLC+KAE +LDHL
Subjt:  PFCCMLCRKAEENLDHL

A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X21.4e-2348.28Show/hide
Query:  TFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLR
        +FS+GF  +L+++E T++ +LL+L+DG + + +RRDVR  + +PS GF CKS F  L++PSP  + VF  + + K  KKV FF WQV+LGRV   DRL+R
Subjt:  TFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLR

Query:  VKAPMVGPFCCMLCRK
         +  ++ PFCC+LCRK
Subjt:  VKAPMVGPFCCMLCRK

A0A5D3CI74 Calpain-type cysteine protease DEK12.2e-2141.67Show/hide
Query:  MKYRTVADILGLVGSSTTFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFF
        +K   +AD L   G+S +FSFGF R+LSDRET++++ L+SL++  S R  RRDV  WS  P  GF CKSFFQ LVN +P  +SV S +W++K  +K + F
Subjt:  MKYRTVADILGLVGSSTTFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFF

Query:  AWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN
        +WQV                              EE+LDHLLW+
Subjt:  AWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN

A0A5D3E255 Reverse transcriptase3.4e-2253.06Show/hide
Query:  LRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN
        L    R+V  WS +PS GFS KS F  L++PSP R+ VF  +W++K  KKV FF WQV+L R N  DRL+R   P     CC+LCRKA+E+LDHLLW+
Subjt:  LRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVNTFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWN

A0A6J1DFI2 uncharacterized protein LOC1110196248.9e-2333.18Show/hide
Query:  LSFWNPWKDISMELPSFSDFVHHVVGDGNDTYFWEDRWSGDRPLNLTFPHLFHLSSMKNHKVVDVLSHSGSSPSLSFRFRRALSDRESTEVTTLLSLIEE
        +S +NPWK I+   P FS  +   VGDG + YFWED W G++PL+L FP ++ LS  K   V +VL+      S+S    R+L+D ES E+  LL L+  
Subjt:  LSFWNPWKDISMELPSFSDFVHHVVGDGNDTYFWEDRWSGDRPLNLTFPHLFHLSSMKNHKVVDVLSHSGSSPSLSFRFRRALSDRESTEVTTLLSLIEE

Query:  FEFRWERRDIRCWSPSPSEGFSCILLPIVIPFSLFCGRRRKTWILLWRCDFAHSAWSLFFESFAK-------QMVDYPDVRGMIEEFLLHPTFSNKGRFL
              R D+R W P+P  GFSC        F +       +++       + S  + +F S  K       +   +  ++G     ++ P F N+GRFL
Subjt:  FEFRWERRDIRCWSPSPSEGFSCILLPIVIPFSLFCGRRRKTWILLWRCDFAHSAWSLFFESFAK-------QMVDYPDVRGMIEEFLLHPTFSNKGRFL

Query:  WQVDMCALLCG
        WQ    A L G
Subjt:  WQVDMCALLCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATCGCACTGTGGCGGATATCCTTGGTCTTGTGGGGAGTTCCACCACGTTTTCTTTTGGTTTTCATCGTTCGTTATCTGATAGAGAGACCACAGACATCATGAC
CCTCTTATCTTTGATAGATGGGGCTAGCCTTAGATCGGACAGGAGGGATGTGCGCTTTTGGAGTCTTGACCCCTCAGCGGGCTTTTCCTGCAAATCGTTTTTTCAGTTTC
TGGTCAATCCCTCCCCCGTTAGAAAGTCCGTCTTTTCGTGTCTCTGGAAGGTTAAGGCTTCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGTCATCTTGGGCCGTGTTAAC
ACTTTTGATAGGCTTTTGAGAGTGAAGGCTCCTATGGTCGGTCCTTTTTGTTGCATGCTTTGTCGGAAGGCTGAGGAAAATCTTGATCATTTGTTATGGAATTACGCCGC
GCCGCCACCGCCACACGCCCAGCCCGTGAAACAGCCACGAATCCCGCATGCCGCCGTCTACTCTTTTCTTCGCGTGTTTGTGGAAGTTACAGCAGCTTCAAGCTTCGTTT
TGCATTTAACTTGGGCGTTGGGGTTGTTTCGAGTGGTTCTTGGTGGCCTTGGGGGCTCTTCGGGGCCTCAGGAGGTTCTCTTCCAGAAGTTCGATTTCAGGTTCTACTCG
GGCTTCGATCAATCAGGACCCCACCTCCGACCTCTTAGTTTCTGGAATCCTTGGAAAGACATCAGCATGGAGCTCCCTTCTTTCTCGGATTTTGTGCACCACGTGGTGGG
GGATGGGAATGATACGTATTTTTGGGAGGATAGATGGTCGGGGGATAGACCCCTCAATCTAACTTTCCCTCATCTTTTTCATTTGTCGTCCATGAAAAATCATAAAGTGG
TGGATGTCTTGTCTCATTCAGGGAGCTCCCCCTCGCTTTCTTTCAGGTTTCGTCGCGCTTTGTCCGATAGGGAATCGACGGAAGTCACAACTCTTCTTTCTTTGATTGAG
GAGTTTGAGTTTAGGTGGGAGAGGAGAGATATTCGTTGTTGGAGTCCTAGTCCTTCCGAGGGGTTTTCGTGTATCCTCCTCCCCATAGTGATTCCATTTTCTCTCTTTTG
TGGAAGGCGGAGGAAGACTTGGATTTTGTTATGGAGGTGTGATTTTGCTCACTCGGCGTGGAGTCTTTTCTTTGAGTCCTTCGCTAAGCAGATGGTAGATTATCCTGATG
TGAGGGGGATGATCGAGGAGTTCCTCCTCCATCCGACTTTCAGCAACAAGGGGAGATTCTTGTGGCAAGTTGACATGTGTGCGCTCCTTTGTGGGGGGAAAGAAATAATA
GAATCTTTAGGGGGATATGTGTGTGCCCAGGGGAAGTGTGGTTGCTCACTAGATTCCATGTTTCACTTTGGGCTTCGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATATCGCACTGTGGCGGATATCCTTGGTCTTGTGGGGAGTTCCACCACGTTTTCTTTTGGTTTTCATCGTTCGTTATCTGATAGAGAGACCACAGACATCATGAC
CCTCTTATCTTTGATAGATGGGGCTAGCCTTAGATCGGACAGGAGGGATGTGCGCTTTTGGAGTCTTGACCCCTCAGCGGGCTTTTCCTGCAAATCGTTTTTTCAGTTTC
TGGTCAATCCCTCCCCCGTTAGAAAGTCCGTCTTTTCGTGTCTCTGGAAGGTTAAGGCTTCGAAGAAGGTCTTGTTCTTTGCTTGGCAGGTCATCTTGGGCCGTGTTAAC
ACTTTTGATAGGCTTTTGAGAGTGAAGGCTCCTATGGTCGGTCCTTTTTGTTGCATGCTTTGTCGGAAGGCTGAGGAAAATCTTGATCATTTGTTATGGAATTACGCCGC
GCCGCCACCGCCACACGCCCAGCCCGTGAAACAGCCACGAATCCCGCATGCCGCCGTCTACTCTTTTCTTCGCGTGTTTGTGGAAGTTACAGCAGCTTCAAGCTTCGTTT
TGCATTTAACTTGGGCGTTGGGGTTGTTTCGAGTGGTTCTTGGTGGCCTTGGGGGCTCTTCGGGGCCTCAGGAGGTTCTCTTCCAGAAGTTCGATTTCAGGTTCTACTCG
GGCTTCGATCAATCAGGACCCCACCTCCGACCTCTTAGTTTCTGGAATCCTTGGAAAGACATCAGCATGGAGCTCCCTTCTTTCTCGGATTTTGTGCACCACGTGGTGGG
GGATGGGAATGATACGTATTTTTGGGAGGATAGATGGTCGGGGGATAGACCCCTCAATCTAACTTTCCCTCATCTTTTTCATTTGTCGTCCATGAAAAATCATAAAGTGG
TGGATGTCTTGTCTCATTCAGGGAGCTCCCCCTCGCTTTCTTTCAGGTTTCGTCGCGCTTTGTCCGATAGGGAATCGACGGAAGTCACAACTCTTCTTTCTTTGATTGAG
GAGTTTGAGTTTAGGTGGGAGAGGAGAGATATTCGTTGTTGGAGTCCTAGTCCTTCCGAGGGGTTTTCGTGTATCCTCCTCCCCATAGTGATTCCATTTTCTCTCTTTTG
TGGAAGGCGGAGGAAGACTTGGATTTTGTTATGGAGGTGTGATTTTGCTCACTCGGCGTGGAGTCTTTTCTTTGAGTCCTTCGCTAAGCAGATGGTAGATTATCCTGATG
TGAGGGGGATGATCGAGGAGTTCCTCCTCCATCCGACTTTCAGCAACAAGGGGAGATTCTTGTGGCAAGTTGACATGTGTGCGCTCCTTTGTGGGGGGAAAGAAATAATA
GAATCTTTAGGGGGATATGTGTGTGCCCAGGGGAAGTGTGGTTGCTCACTAGATTCCATGTTTCACTTTGGGCTTCGGTCTTGA
Protein sequenceShow/hide protein sequence
MKYRTVADILGLVGSSTTFSFGFHRSLSDRETTDIMTLLSLIDGASLRSDRRDVRFWSLDPSAGFSCKSFFQFLVNPSPVRKSVFSCLWKVKASKKVLFFAWQVILGRVN
TFDRLLRVKAPMVGPFCCMLCRKAEENLDHLLWNYAAPPPPHAQPVKQPRIPHAAVYSFLRVFVEVTAASSFVLHLTWALGLFRVVLGGLGGSSGPQEVLFQKFDFRFYS
GFDQSGPHLRPLSFWNPWKDISMELPSFSDFVHHVVGDGNDTYFWEDRWSGDRPLNLTFPHLFHLSSMKNHKVVDVLSHSGSSPSLSFRFRRALSDRESTEVTTLLSLIE
EFEFRWERRDIRCWSPSPSEGFSCILLPIVIPFSLFCGRRRKTWILLWRCDFAHSAWSLFFESFAKQMVDYPDVRGMIEEFLLHPTFSNKGRFLWQVDMCALLCGGKEII
ESLGGYVCAQGKCGCSLDSMFHFGLRS