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Spg027188 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027188
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein GID2-like
Genome locationscaffold8:5046502..5049638
RNA-Seq ExpressionSpg027188
SyntenySpg027188
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily
IPR045118 - F-box only protein FBXO9/FBXO48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608444.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
KAG7037780.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
XP_022941417.1 F-box protein GID2-like [Cucurbita moschata]3.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
XP_022982290.1 F-box protein GID2-like [Cucurbita maxima]3.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
XP_023521607.1 F-box protein GID2-like [Cucurbita pepo subsp. pepo]7.4e-1655.91Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVR-WSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS   WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVR-WSVMRSAI--TPPS
TrEMBL top hitse value%identityAlignment
A0A0A0L2H5 F-box domain-containing protein6.1e-1661.84Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH   +L + P   P  ++S     SS
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESS
A0A540NI42 F-box domain-containing protein6.1e-1660.53Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESS
        +A+CVSKQWHKTAEDERLWELICTRHW NI CGNQQLRSV L     R LH   +L++ P   P   +S     SS
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESS
A0A6J1FMD6 F-box protein GID2-like1.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
A0A6J1J293 F-box protein GID2-like1.9e-1756.52Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
        MAACVSKQWHKTAEDERLWELICTRHW N  CGNQQLRSV L     R LH      L    AP  + S     SS  WS   + I   PP+
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAI--TPPS
A0A6P4AGW5 F-box protein GID26.1e-1682.35Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
        MAACVSKQWHKTAEDERLWELICTRHW NI CGNQQLRSV L     R LH
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
SwissProt top hitse value%identityAlignment
Q7XAK4 F-box protein GID23.5e-0852Show/hide
Query:  AACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
        AACVS+ W + AEDERLWE  C R W N+    +QLR+V L     R LH
Subjt:  AACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
Q9STX3 F-box protein GID22.9e-1570.59Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
        M++CVSK WHKTA+DERLWELICTRHW NI CG  QLRSV L     R LH
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
Arabidopsis top hitse value%identityAlignment
AT4G24210.1 F-box family protein2.1e-1670.59Show/hide
Query:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH
        M++CVSK WHKTA+DERLWELICTRHW NI CG  QLRSV L     R LH
Subjt:  MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCTGTGTGAGCAAGCAATGGCACAAAACGGCCGAAGACGAGCGCCTTTGGGAGCTGATCTGCACCAGGCACTGGGTGAACATCGACTGCGGCAACCAACAACT
CCGATCTGTAACTCTTCTTCCTTCTGAAAATCGTCTTCTCCATGGAGGCTTGAACTTGGCGCTAATTCCGCACATCGCGCCATTGAGAACGACGTCGTTCCACGGACGCG
AGTCGTCGGTCCGATGGAGCGTGATGAGAAGCGCAATCACGCCGCCGAGCGACTCGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCTGTGTGAGCAAGCAATGGCACAAAACGGCCGAAGACGAGCGCCTTTGGGAGCTGATCTGCACCAGGCACTGGGTGAACATCGACTGCGGCAACCAACAACT
CCGATCTGTAACTCTTCTTCCTTCTGAAAATCGTCTTCTCCATGGAGGCTTGAACTTGGCGCTAATTCCGCACATCGCGCCATTGAGAACGACGTCGTTCCACGGACGCG
AGTCGTCGGTCCGATGGAGCGTGATGAGAAGCGCAATCACGCCGCCGAGCGACTCGGCGTAG
Protein sequenceShow/hide protein sequence
MAACVSKQWHKTAEDERLWELICTRHWVNIDCGNQQLRSVTLLPSENRLLHGGLNLALIPHIAPLRTTSFHGRESSVRWSVMRSAITPPSDSA