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Spg027218 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027218
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold8:2812651..2818056
RNA-Seq ExpressionSpg027218
SyntenySpg027218
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605336.1 hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4792.66Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKV
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPS
        SQSV+QPPS
Subjt:  SQSVRQPPS

XP_022148881.1 uncharacterized protein LOC111017444 [Momordica charantia]6.5e-3979.28Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        MET +KEED++T PA+S+GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLR+RYEAE    QSA+SVAS EK 
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
          SV+QP SK+
Subjt:  SQSVRQPPSKQ

XP_022948157.1 uncharacterized protein LOC111451821 [Cucurbita moschata]4.5e-4891.89Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKV
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
        SQSV+QPPS Q
Subjt:  SQSVRQPPSKQ

XP_023007268.1 uncharacterized protein LOC111499806 [Cucurbita maxima]5.9e-4891.89Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        ME Q+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVAS EKV
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
        SQSV+QPPS Q
Subjt:  SQSVRQPPSKQ

XP_038900834.1 uncharacterized protein LOC120087898 [Benincasa hispida]4.7e-3792.39Show/hide
Query:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ-SAKQSANSV
        ++KEEDKL   ASS GFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ SAKQSANSV
Subjt:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQ-SAKQSANSV

TrEMBL top hitse value%identityAlignment
A0A1S3CCY7 uncharacterized protein LOC1034996203.0e-2976.09Show/hide
Query:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV
        ++K  DKL   +SS+ F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Subjt:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV

A0A5D3BSB4 Uncharacterized protein3.0e-2976.09Show/hide
Query:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV
        ++K  DKL   +SS+ F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKLRKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Subjt:  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV

A0A6J1D6P5 uncharacterized protein LOC1110174443.2e-3979.28Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        MET +KEED++T PA+S+GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLR+RYEAE    QSA+SVAS EK 
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
          SV+QP SK+
Subjt:  SQSVRQPPSKQ

A0A6J1G8F0 uncharacterized protein LOC1114518212.2e-4891.89Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKV
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
        SQSV+QPPS Q
Subjt:  SQSVRQPPSKQ

A0A6J1L783 uncharacterized protein LOC1114998062.8e-4891.89Show/hide
Query:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV
        ME Q+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVAS EKV
Subjt:  METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKV

Query:  SQSVRQPPSKQ
        SQSV+QPPS Q
Subjt:  SQSVRQPPSKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09270.1 unknown protein1.4e-2355.79Show/hide
Query:  EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS
        ED+ + P+  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+A  ++ S  S +K S
Subjt:  EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS

AT5G09270.2 unknown protein1.4e-2355.79Show/hide
Query:  EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS
        ED+ + P+  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+TEDRVR LQ KLR+  E EQ+A  ++ S  S +K S
Subjt:  EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCAACTCCGACAAGTGTTGCCCTTGCTCCTATACCCACAACGATGGAACCTCCTTCCTCGACGCAACAAAACCCACGGGCGATAACACGGGATCTGCGAGCAGT
AATGTCTGGCAACCGACTGAAGCAAATCAAGAAGTCACCCTCTCTCGATCCCCTCTCTCTTCCTCCATCTAGAGTTTCAAGCGTCAGCTCTCCTGAATCCGCCGGAGCCC
ACCGACCGGCGACCGGCAACCGAAAACTGCCGCGCCTCTCATCCTCATCTGATAGCGACCTTCTCTGCCCCTACATTGGTAATAGAAAGGGGGTAATGGAAACTCAGCAG
AAGGAAGAAGATAAGTTAACTGCTCCTGCTAGTTCCACTGGGTTTTTGGGTAAATTGGAAGAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCCTATGTGTG
GGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGAAAGCTCCGGAAGACCGAGGACAGAGTACGCGTGCTACAGGAGAAGCTTCGAC
AGCGTTACGAAGCCGAACAATCAGCCAAACAATCGGCAAATTCAGTGGCATCAGCTGAAAAAGTTTCACAATCTGTTAGACAGCCTCCCTCCAAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCAACTCCGACAAGTGTTGCCCTTGCTCCTATACCCACAACGATGGAACCTCCTTCCTCGACGCAACAAAACCCACGGGCGATAACACGGGATCTGCGAGCAGT
AATGTCTGGCAACCGACTGAAGCAAATCAAGAAGTCACCCTCTCTCGATCCCCTCTCTCTTCCTCCATCTAGAGTTTCAAGCGTCAGCTCTCCTGAATCCGCCGGAGCCC
ACCGACCGGCGACCGGCAACCGAAAACTGCCGCGCCTCTCATCCTCATCTGATAGCGACCTTCTCTGCCCCTACATTGGTAATAGAAAGGGGGTAATGGAAACTCAGCAG
AAGGAAGAAGATAAGTTAACTGCTCCTGCTAGTTCCACTGGGTTTTTGGGTAAATTGGAAGAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCCTATGTGTG
GGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGAAAGCTCCGGAAGACCGAGGACAGAGTACGCGTGCTACAGGAGAAGCTTCGAC
AGCGTTACGAAGCCGAACAATCAGCCAAACAATCGGCAAATTCAGTGGCATCAGCTGAAAAAGTTTCACAATCTGTTAGACAGCCTCCCTCCAAGCAGTAA
Protein sequenceShow/hide protein sequence
MMSTPTSVALAPIPTTMEPPSSTQQNPRAITRDLRAVMSGNRLKQIKKSPSLDPLSLPPSRVSSVSSPESAGAHRPATGNRKLPRLSSSSDSDLLCPYIGNRKGVMETQQ
KEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ