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Spg027233 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027233
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationscaffold8:4749413..4750662
RNA-Seq ExpressionSpg027233
SyntenySpg027233
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.4e-1327.96Show/hide
Query:  LARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC-----------------TLDALKGLNLPMRELPH--
        LAR  ++ +KGL L+AL IYG +++PR+KGYV+ +V+K+F  IE+GVNP IP++ ET  +LN+C                  LDA K  + P+ ++ +  
Subjt:  LARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC-----------------TLDALKGLNLPMRELPH--

Query:  -----------------------------------SSSGSCEDSNERKRQELASWRVVRRLNDNNHSEGVTPEYLQWRIRRSKISV
                                             S     +N +  + + +W+ V+++    H EG T +Y  WR  R+ I++
Subjt:  -----------------------------------SSSGSCEDSNERKRQELASWRVVRRLNDNNHSEGVTPEYLQWRIRRSKISV

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.1e-1358.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +I+E+KGL LLAL IYG V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]3.1e-1358.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +I+E+KGL LLAL IYG V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]3.7e-1443.14Show/hide
Query:  EIVYLIENLGSSSSLNQVQIILNELGEQKAI----WEELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALN
        EIVY      ++ +  ++Q  +   G ++ +      ++ + +I+E+KGL LLAL IYG V++P+ +GYVDG V+KLFF +E+GVNP IP+LA+T  +LN
Subjt:  EIVYLIENLGSSSSLNQVQIILNELGEQKAI----WEELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALN

Query:  YC
        YC
Subjt:  YC

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]4.8e-1458.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +++E+KGL LLAL IYG V++P+ +GYVDG V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like6.8e-1427.96Show/hide
Query:  LARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC-----------------TLDALKGLNLPMRELPH--
        LAR  ++ +KGL L+AL IYG +++PR+KGYV+ +V+K+F  IE+GVNP IP++ ET  +LN+C                  LDA K  + P+ ++ +  
Subjt:  LARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC-----------------TLDALKGLNLPMRELPH--

Query:  -----------------------------------SSSGSCEDSNERKRQELASWRVVRRLNDNNHSEGVTPEYLQWRIRRSKISV
                                             S     +N +  + + +W+ V+++    H EG T +Y  WR  R+ I++
Subjt:  -----------------------------------SSSGSCEDSNERKRQELASWRVVRRLNDNNHSEGVTPEYLQWRIRRSKISV

A0A5A7T5S7 Girdin-like1.5e-1358.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +I+E+KGL LLAL IYG V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

A0A5A7T6E2 Girdin-like1.5e-1358.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +I+E+KGL LLAL IYG V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

A0A5A7UL51 Girdin-like1.8e-1443.14Show/hide
Query:  EIVYLIENLGSSSSLNQVQIILNELGEQKAI----WEELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALN
        EIVY      ++ +  ++Q  +   G ++ +      ++ + +I+E+KGL LLAL IYG V++P+ +GYVDG V+KLFF +E+GVNP IP+LA+T  +LN
Subjt:  EIVYLIENLGSSSSLNQVQIILNELGEQKAI----WEELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALN

Query:  YC
        YC
Subjt:  YC

A0A5A7UWQ6 Uncharacterized protein2.3e-1458.46Show/hide
Query:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC
        ++ + +++E+KGL LLAL IYG V++P+ +GYVDG V+KLFF +E+GVNP IP+LAET  +LNYC
Subjt:  ELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGTTTACCTTATAGAAAACCTCGGGTCGTCATCCTCCTTAAATCAAGTTCAAATCATTCTTAATGAGCTAGGAGAGCAGAAAGCTATTTGGGAAGAACTTGC
CCGCAAACACATAAATGAAGAAAAGGGTCTGGTTCTGTTAGCTCTATTCATCTACGGGATGGTCTTGTATCCCAGAGTAAAAGGGTATGTGGATGGCGATGTCTTGAAGC
TCTTCTTCACCATTGAGCAAGGGGTGAATCCAACCATACCTCTTCTGGCAGAAACAGTTTGGGCGCTCAATTATTGCACATTGGATGCCCTTAAAGGCCTTAATCTACCG
ATGCGGGAGCTTCCACACAGTTCCTCTGGTAGCTGTGAGGATTCTAATGAAAGGAAGCGACAAGAGTTGGCTTCCTGGAGGGTCGTTAGAAGGCTAAATGATAACAATCA
TTCTGAGGGAGTTACTCCAGAATACTTGCAGTGGCGCATCAGGAGGAGCAAGATCTCAGTTACAACTCGTGGTAATGTTGGAGAATCTTCTAATAGAGCAGTAGACAAAA
ACCTGACCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAGTTTACCTTATAGAAAACCTCGGGTCGTCATCCTCCTTAAATCAAGTTCAAATCATTCTTAATGAGCTAGGAGAGCAGAAAGCTATTTGGGAAGAACTTGC
CCGCAAACACATAAATGAAGAAAAGGGTCTGGTTCTGTTAGCTCTATTCATCTACGGGATGGTCTTGTATCCCAGAGTAAAAGGGTATGTGGATGGCGATGTCTTGAAGC
TCTTCTTCACCATTGAGCAAGGGGTGAATCCAACCATACCTCTTCTGGCAGAAACAGTTTGGGCGCTCAATTATTGCACATTGGATGCCCTTAAAGGCCTTAATCTACCG
ATGCGGGAGCTTCCACACAGTTCCTCTGGTAGCTGTGAGGATTCTAATGAAAGGAAGCGACAAGAGTTGGCTTCCTGGAGGGTCGTTAGAAGGCTAAATGATAACAATCA
TTCTGAGGGAGTTACTCCAGAATACTTGCAGTGGCGCATCAGGAGGAGCAAGATCTCAGTTACAACTCGTGGTAATGTTGGAGAATCTTCTAATAGAGCAGTAGACAAAA
ACCTGACCAGCTAG
Protein sequenceShow/hide protein sequence
MEIVYLIENLGSSSSLNQVQIILNELGEQKAIWEELARKHINEEKGLVLLALFIYGMVLYPRVKGYVDGDVLKLFFTIEQGVNPTIPLLAETVWALNYCTLDALKGLNLP
MRELPHSSSGSCEDSNERKRQELASWRVVRRLNDNNHSEGVTPEYLQWRIRRSKISVTTRGNVGESSNRAVDKNLTS