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Spg027249 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027249
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationscaffold8:4058567..4059884
RNA-Seq ExpressionSpg027249
SyntenySpg027249
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571348.1 hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3175.26Show/hide
Query:  RPVEAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        R +EAIM R+DRKSSIE EPRTLKM+QIQFAREAALYV+NTT++EEA++IFTEGLE  ECKAI  E +S+MEN FHE+EAD+L PLY+LRDIV+APF
Subjt:  RPVEAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3284.62Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAMRIFTEGLE VECKA I++RDS M+NC HEEE D+L  LYRL DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]5.0e-3177.17Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADD-LQPLYRLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAM+IFTEGL+PVECKAI++++DS+++N +H+EE D+ LQP Y+LRDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADD-LQPLYRLRDIVSAPF

XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]1.7e-3182.42Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAMRIFTEGLE VECK  I++RDS M+NC HEEE D+L   YRL DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]5.0e-3181.32Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        M  IDRKSSIENEPRTL+MHQIQFAREAALYVINTTTIEEAM+IFTEGL+PVECKA IQ++DS+M N +HEEE D+LQ LY+ RDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein2.4e-3177.17Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADD-LQPLYRLRDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAM+IFTEGL+PVECKAI++++DS+++N +H+EE D+ LQP Y+LRDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADD-LQPLYRLRDIVSAPF

A0A1S3CDH2 uncharacterized protein LOC1034996385.4e-3179.35Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQE-RDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        M  IDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAM+IFTEGL+PVECKAII E +DS+M+N +H+EE D+LQP  +LRDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQE-RDSMMENCFHEEEADDLQPLYRLRDIVSAPF

A0A2G9GJS3 Uncharacterized protein2.9e-1652.58Show/hide
Query:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPV--------ECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        R++R+SSIENEPRTL +HQI +AREAA+YV+NT +IEEA+RIFTEGLEPV         C A  +E +   +   H+++ +   P   +RDIVSAPF
Subjt:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPV--------ECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

A0A6J1DBC1 uncharacterized protein LOC1110189158.6e-2973.68Show/hide
Query:  EAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQER-DSMMENCFHEEEADDLQPLYRLRDIVSAPF
        E IM RIDRKSSIENEPRTLKMHQIQFAREAALY++NTTTI+EAMRIFTEGLE VECKA      +   +  ++EEE  DL+PLYR RDIVSAPF
Subjt:  EAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQER-DSMMENCFHEEEADDLQPLYRLRDIVSAPF

A0A6J1G887 uncharacterized protein LOC1114516488.3e-3282.42Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAMRIFTEGLE VECK  I++RDS M+NC HEEE D+L   YRL DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQPLYRLRDIVSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein3.4e-0946.15Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQ
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT+  E  E     +ER     N   EE+ DD +
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQ

AT4G33467.2 unknown protein2.6e-0946.15Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQ
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT+  E  E     +ER     N   EE+ DD +
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEADDLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGCGGAGTACCAACGTGGCAGCCGGCAATTGGTCGGTGACGGAGCGAAGCAAAAACCGATCAAGACAAGAGATTCGGAGGGGACGGCCAGTTGAAGCAATAAT
GGAAAGAATTGATAGAAAATCATCAATTGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCACTCTATGTGATAAACACAACCACCA
TAGAAGAAGCAATGAGGATTTTCACTGAGGGATTAGAACCAGTGGAATGTAAAGCAATTATTCAAGAGAGAGATTCAATGATGGAAAATTGCTTCCATGAAGAAGAAGCT
GATGACTTACAACCTCTTTATCGACTAAGAGACATTGTCTCTGCCCCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGCGGAGTACCAACGTGGCAGCCGGCAATTGGTCGGTGACGGAGCGAAGCAAAAACCGATCAAGACAAGAGATTCGGAGGGGACGGCCAGTTGAAGCAATAAT
GGAAAGAATTGATAGAAAATCATCAATTGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCACTCTATGTGATAAACACAACCACCA
TAGAAGAAGCAATGAGGATTTTCACTGAGGGATTAGAACCAGTGGAATGTAAAGCAATTATTCAAGAGAGAGATTCAATGATGGAAAATTGCTTCCATGAAGAAGAAGCT
GATGACTTACAACCTCTTTATCGACTAAGAGACATTGTCTCTGCCCCTTTTTAA
Protein sequenceShow/hide protein sequence
MFERSTNVAAGNWSVTERSKNRSRQEIRRGRPVEAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMRIFTEGLEPVECKAIIQERDSMMENCFHEEEA
DDLQPLYRLRDIVSAPF