; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027276 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027276
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein rough sheath 2 homolog
Genome locationscaffold8:3650931..3653659
RNA-Seq ExpressionSpg027276
SyntenySpg027276
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036747.1 Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4571.78Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+AAFQS PPP PLANVM RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSST
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST

Query:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

XP_022949284.1 protein rough sheath 2 homolog [Cucurbita moschata]1.2e-4571.78Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+AAFQS PPP PLANVM RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSST
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST

Query:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

XP_022997764.1 protein rough sheath 2 homolog [Cucurbita maxima]1.3e-4470.55Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+ AFQS PPP PLAN+M RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSST
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST

Query:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

XP_023521553.1 transcription factor AS1-like, partial [Cucurbita pepo subsp. pepo]9.9e-4572.9Show/hide
Query:  SSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS--PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTTPLPSVSL
        SS EKALQGPYDHILETF EKYVQPKLY+AAFQS  PPP PLANVM RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSSTTP PSVSL
Subjt:  SSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS--PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTTPLPSVSL

Query:  TLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

XP_023525837.1 protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]1.5e-4571.34Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS--PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSS
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+AAFQS  PPP PLANVM RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSS
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS--PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSS

Query:  TTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TTP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

TrEMBL top hitse value%identityAlignment
A0A5D3CNU9 Transcription factor AS1-like8.5e-3458.54Show/hide
Query:  LHPPFPDGNRVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSS
        L P  P    VSS EKALQGPYDHILETF EKYVQPKLY      P P         +P+PD + +LSLGSV+STTSSS +LPLWMNVNST TASSST S
Subjt:  LHPPFPDGNRVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSS

Query:  TTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TTP PSVSLTLSPSEP  L+ E                       V +IGALVQYCKE+EEGR+
Subjt:  TTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

A0A6J1FAF4 protein rough sheath 2 homolog5.5e-4165.64Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTT
        DGN     VSS EKA+QGPYDHILETF EKYVQPK+YAAAFQSPPP P      RL VP+ + VLSLGSVSSTTSS  VLPLWMNVNST TASSST+STT
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTT

Query:  PLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRKD
        P PSVSLTLSPSEPA L+ E                    +  VQQ+GALVQYCK+LEEGR++
Subjt:  PLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRKD

A0A6J1GCE3 protein rough sheath 2 homolog5.7e-4671.78Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+AAFQS PPP PLANVM RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSST
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST

Query:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

A0A6J1IZB3 protein rough sheath 2 homolog5.1e-3964.81Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTT
        DGN     VSS EKA+QGPYDHILETF EKYVQPK+YAAAFQSPPP P      RL VP+ + VLSLGSVSSTTSS  VLPLWMN NST TASSST STT
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTT

Query:  PLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        P PSVSLTLSPSEPA  + E                    +  VQQ+GALVQYCK+LEEGR+
Subjt:  PLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

A0A6J1KCH4 protein rough sheath 2 homolog6.2e-4570.55Show/hide
Query:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST
        DGN     VSS EKALQGPYDHILETF EKYVQPKLY+ AFQS PPP PLAN+M RLPVPD + VLSLGSV+STTSSS VLPLWMNVNST TASSSTSST
Subjt:  DGN----RVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQS-PPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSST

Query:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK
        TP PSVSLTLSPSEP  LD E                    L  VQQ+GALV YCKELEEGR+
Subjt:  TPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGACAGGAAGCCGACAAGCTACAGATCTGGGCGCGGTAGTCGTAGCCCAGCCACCGGCACAGTTCAACTGCAGCTCGCCCGTCGTAGTCGTCCGTTCGTGATCCT
CGTGCTGGAGATCTCGAGGATCTTGAAGAAATCTCGCCAGATCTGGGCGTGGGCGTGCGTGCAAGACTCCCTCCTCCTCCATCCTCCATTTCCGGACGGAAACAGAGTTT
CCTCGCTAGAGAAGGCGCTCCAGGGTCCCTACGACCATATCCTCGAGACCTTCACTGAGAAGTACGTCCAGCCGAAGCTCTACGCCGCTGCCTTCCAGTCTCCTCCACCG
CTGCCCTTGGCCAACGTCATGTCTCGCCTTCCCGTCCCCGACGTCAATCTGGTCCTTTCACTCGGATCCGTCAGCTCCACGACATCGTCTTCCATCGTCCTCCCTCTGTG
GATGAACGTCAACTCCACCAGAACCGCTTCCTCTTCCACCTCGTCGACCACGCCCTTGCCATCGGTGAGCCTCACGCTATCTCCCTCTGAACCTGCCGCTCTCGACTTGG
AAGAAGGCTGGCAGATCGGAGCCTTAGTCCAGCAGATCGGAGCAGATCGGAAGAAGGTAGCCCTCGCCGTTGTTCAGCAGATCGGAGCCCTAGTCCAGTACTGCAAGGAG
TTGGAAGAAGGTCGGAAAGACGACCATGAAATTGTTTATGGGGTCCCGCTCACAGCAAGCTATGTACGAGTACTGAATGAAGTTGTACATGACGCTGATGCTCAATTGCC
CATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACACAGTAGGCTCTTATCTTCCGTGGCCTAAAGAACTCAGGTATGAACCTAAGAAAATGCATCGTGAATTAGCTG
CAATAAAGGAGAAGAAGTCAAATAGTCAAGTGTCAAAAGTGTCGGTAACAGTGAAATACGTATTAGGATTTATAGAGAACATGACAAGGGATTACTTAGATATTACAGTA
CCCGATCACGTGTTCAGCTACCACTTTGACTTCCATCTAATGAAAAATAGCATGAAAGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGACAGGAAGCCGACAAGCTACAGATCTGGGCGCGGTAGTCGTAGCCCAGCCACCGGCACAGTTCAACTGCAGCTCGCCCGTCGTAGTCGTCCGTTCGTGATCCT
CGTGCTGGAGATCTCGAGGATCTTGAAGAAATCTCGCCAGATCTGGGCGTGGGCGTGCGTGCAAGACTCCCTCCTCCTCCATCCTCCATTTCCGGACGGAAACAGAGTTT
CCTCGCTAGAGAAGGCGCTCCAGGGTCCCTACGACCATATCCTCGAGACCTTCACTGAGAAGTACGTCCAGCCGAAGCTCTACGCCGCTGCCTTCCAGTCTCCTCCACCG
CTGCCCTTGGCCAACGTCATGTCTCGCCTTCCCGTCCCCGACGTCAATCTGGTCCTTTCACTCGGATCCGTCAGCTCCACGACATCGTCTTCCATCGTCCTCCCTCTGTG
GATGAACGTCAACTCCACCAGAACCGCTTCCTCTTCCACCTCGTCGACCACGCCCTTGCCATCGGTGAGCCTCACGCTATCTCCCTCTGAACCTGCCGCTCTCGACTTGG
AAGAAGGCTGGCAGATCGGAGCCTTAGTCCAGCAGATCGGAGCAGATCGGAAGAAGGTAGCCCTCGCCGTTGTTCAGCAGATCGGAGCCCTAGTCCAGTACTGCAAGGAG
TTGGAAGAAGGTCGGAAAGACGACCATGAAATTGTTTATGGGGTCCCGCTCACAGCAAGCTATGTACGAGTACTGAATGAAGTTGTACATGACGCTGATGCTCAATTGCC
CATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACACAGTAGGCTCTTATCTTCCGTGGCCTAAAGAACTCAGGTATGAACCTAAGAAAATGCATCGTGAATTAGCTG
CAATAAAGGAGAAGAAGTCAAATAGTCAAGTGTCAAAAGTGTCGGTAACAGTGAAATACGTATTAGGATTTATAGAGAACATGACAAGGGATTACTTAGATATTACAGTA
CCCGATCACGTGTTCAGCTACCACTTTGACTTCCATCTAATGAAAAATAGCATGAAAGAATTTTAA
Protein sequenceShow/hide protein sequence
MFDRKPTSYRSGRGSRSPATGTVQLQLARRSRPFVILVLEISRILKKSRQIWAWACVQDSLLLHPPFPDGNRVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPP
LPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKE
LEEGRKDDHEIVYGVPLTASYVRVLNEVVHDADAQLPIPIVGSIESVFDTVGSYLPWPKELRYEPKKMHRELAAIKEKKSNSQVSKVSVTVKYVLGFIENMTRDYLDITV
PDHVFSYHFDFHLMKNSMKEF