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Spg027295 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027295
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGamma-secretase aspartyl protease complex
Genome locationscaffold8:3721852..3727359
RNA-Seq ExpressionSpg027295
SyntenySpg027295
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011118.1 putative gamma-secretase subunit PEN-2 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1894.23Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTFAIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
XP_008460893.1 PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]1.8e-1885.71Show/hide
Query:  YIMDIVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        +I+DIVGSAIGF V MA+I+SWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  YIMDIVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
XP_022931973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]1.8e-1894.23Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTFAIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]1.8e-1894.23Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTFAIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
XP_023007265.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]3.1e-1892.31Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
TrEMBL top hitse value%identityAlignment
A0A1S3CDI1 probable gamma-secretase subunit PEN-28.7e-1985.71Show/hide
Query:  YIMDIVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        +I+DIVGSAIGF V MA+I+SWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  YIMDIVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
A0A6J1F097 probable gamma-secretase subunit PEN-28.7e-1994.23Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTFAIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
A0A6J1G5B2 probable gamma-secretase subunit PEN-21.9e-1890.38Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFA+FMA+I+SWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
A0A6J1I943 probable gamma-secretase subunit PEN-28.7e-1994.23Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTFAIGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
A0A6J1L2H7 probable gamma-secretase subunit PEN-21.5e-1892.31Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
        IVGSAIGFAVFMA+I+SWALTF+IGGERLFGPVW KLVMYNLADKLGLTGWS
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTGWS
SwissProt top hitse value%identityAlignment
Q9FY84 Probable gamma-secretase subunit PEN-22.4e-1368Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTG
        +V SAIGF+VF A++++WALTF+IGGE+LFGP++ KLVMYN+AD+LGL+G
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTG
Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1.7e-1468Show/hide
Query:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTG
        +V SAIGF+VF A++++WALTF+IGGE+LFGP++ KLVMYN+AD+LGL+G
Subjt:  IVGSAIGFAVFMAVITSWALTFAIGGERLFGPVWGKLVMYNLADKLGLTG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCGTCGTCTCTGACATATCAATCTGTGGTTGAGGTCTTTGGCTCTCTTGCGAGCTCCCATTCTTTATCTTTGTTAGGTGAGAGCAAACACTTTTGCTCGGCTCT
CAAGAAGGATGTCTTTCTTGGTGGGTCCCTTCTGTTGCATTCTCTATCGGAAGGCGAAGCTTCTTCGTTAAGTCACTCTGATACTGGAGTTTGGAAGATCGGAATTTCTG
GACAGTTCTCTTGCAAAACTGTTTATATCATGGATATTGTTGGCTCAGCTATTGGGTTTGCTGTTTTCATGGCCGTTATCACCTCTTGGGCCTTGACATTTGCTATTGGA
GGAGAACGCCTCTTTGGACCTGTTTGGGGTAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCGTCGTCTCTGACATATCAATCTGTGGTTGAGGTCTTTGGCTCTCTTGCGAGCTCCCATTCTTTATCTTTGTTAGGTGAGAGCAAACACTTTTGCTCGGCTCT
CAAGAAGGATGTCTTTCTTGGTGGGTCCCTTCTGTTGCATTCTCTATCGGAAGGCGAAGCTTCTTCGTTAAGTCACTCTGATACTGGAGTTTGGAAGATCGGAATTTCTG
GACAGTTCTCTTGCAAAACTGTTTATATCATGGATATTGTTGGCTCAGCTATTGGGTTTGCTGTTTTCATGGCCGTTATCACCTCTTGGGCCTTGACATTTGCTATTGGA
GGAGAACGCCTCTTTGGACCTGTTTGGGGTAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTGACAGGTTGGAGCTAG
Protein sequenceShow/hide protein sequence
MEPSSLTYQSVVEVFGSLASSHSLSLLGESKHFCSALKKDVFLGGSLLLHSLSEGEASSLSHSDTGVWKIGISGQFSCKTVYIMDIVGSAIGFAVFMAVITSWALTFAIG
GERLFGPVWGKLVMYNLADKLGLTGWS