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Spg027315 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027315
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein TIC 214
Genome locationscaffold7:42569550..42571370
RNA-Seq ExpressionSpg027315
SyntenySpg027315
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7012819.1 unnamed protein product [Microthlaspi erraticum]7.0e-3463.57Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+R LVS PV NW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

CAA7014164.1 unnamed protein product [Microthlaspi erraticum]6.3e-3564.29Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+RPLVS PV NW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

PHU10897.1 hypothetical protein BC332_17827 [Capsicum chinense]1.8e-2954.22Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMI
        MEGQRPLVSPPV NWGLTITSQYAFLSCLSSFMVRYS VLGVEEPHQSIPNLVVKLYCGDDT    T    T +G+              F S   K   
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMI

Query:  GIADPKLWNLGVGLLSK---WNGLSFDFFFF------ITGLWAGVP-ALLSLPSPSSGYGRRNREE
           +P    L     +     N   FD   F      +T + + +P ALLSLPS S GYGR NREE
Subjt:  GIADPKLWNLGVGLLSK---WNGLSFDFFFF------ITGLWAGVP-ALLSLPSPSSGYGRRNREE

PQP98134.1 hypothetical protein Pyn_20557 [Prunus yedoensis var. nudiflora]3.7e-2795.38Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEG+RPLVSPPV N+GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

TYK00176.1 hypothetical protein E5676_scaffold1452G00010 [Cucumis melo var. makuwa]1.7e-2785.33Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG
        MEGQR LVSPPV NWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC DDTVGE     ++ SG
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG

TrEMBL top hitse value%identityAlignment
A0A2G3BWN2 Protein TIC 2148.7e-3054.22Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMI
        MEGQRPLVSPPV NWGLTITSQYAFLSCLSSFMVRYS VLGVEEPHQSIPNLVVKLYCGDDT    T    T +G+              F S   K   
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMI

Query:  GIADPKLWNLGVGLLSK---WNGLSFDFFFF------ITGLWAGVP-ALLSLPSPSSGYGRRNREE
           +P    L     +     N   FD   F      +T + + +P ALLSLPS S GYGR NREE
Subjt:  GIADPKLWNLGVGLLSK---WNGLSFDFFFF------ITGLWAGVP-ALLSLPSPSSGYGRRNREE

A0A5D3BPI7 Uncharacterized protein8.1e-2885.33Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG
        MEGQR LVSPPV NWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC DDTVGE     ++ SG
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG

A0A6D2HAQ3 Uncharacterized protein3.4e-3463.57Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+R LVS PV NW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

A0A6D2K9K4 Uncharacterized protein3.1e-3564.29Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+RPLVS PV NW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

A0A6N2NAY5 Uncharacterized protein1.1e-2795.38Show/hide
Query:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEGQRPLVSP V NWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DTVGE
Subjt:  MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCATGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATACCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGAGCACGTGGCTACGAACCACGGTGT
CGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTG
GGTGTGGGTCTTTTGTCGAAATGGAATGGCTTATCTTTTGATTTTTTCTTTTTCATTACTGGGTTATGGGCGGGGGTACCGGCCCTCTTATCTCTTCCTTCTCCGAGCTC
GGGTTATGGAAGAAGGAACCGAGAAGAAAGTATGAGCAACAACAGGTTTTATTATAGGACAGCTCATGATGTTCATATCGATCTATTATGTGCCTCTGCATCTAGCATTG
GGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCATGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATACCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGAGCACGTGGCTACGAACCACGGTGT
CGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTG
GGTGTGGGTCTTTTGTCGAAATGGAATGGCTTATCTTTTGATTTTTTCTTTTTCATTACTGGGTTATGGGCGGGGGTACCGGCCCTCTTATCTCTTCCTTCTCCGAGCTC
GGGTTATGGAAGAAGGAACCGAGAAGAAAGTATGAGCAACAACAGGTTTTATTATAGGACAGCTCATGATGTTCATATCGATCTATTATGTGCCTCTGCATCTAGCATTG
GGTAG
Protein sequenceShow/hide protein sequence
MEGQRPLVSPPVMNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNL
GVGLLSKWNGLSFDFFFFITGLWAGVPALLSLPSPSSGYGRRNREESMSNNRFYYRTAHDVHIDLLCASASSIG