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Spg027325 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027325
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:43736829..43740370
RNA-Seq ExpressionSpg027325
SyntenySpg027325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.3e-1245.1Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT
        A  W  F+K  LL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L + G ID   +AR+  T
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT

Query:  QE
        QE
Subjt:  QE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1235.37Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR-
        A  W  F+K RLL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L + G ID   +AR+ + 
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR-

Query:  --TQEARQGAELGFAECSEY-----IAERLEGAKSAIQENREQNCHV
          T+  +Q +    A  S       I ++L+  +  + +   Q  H+
Subjt:  --TQEARQGAELGFAECSEY-----IAERLEGAKSAIQENREQNCHV

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]6.1e-1345.19Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT
        A  W  F+K RLL TTH  TVS+DR+L ++++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L   G ID   +AR+  T
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT

Query:  QEAR
        QE +
Subjt:  QEAR

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]1.1e-1138.28Show/hide
Query:  ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDV
        I N+G    + Q  YLK  A  W  F++   +  +H ST+S + +L ++AIL   SI+VGKII  EI +C +KK    +FP+ IT LC +A V + AN  
Subjt:  ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDV

Query:  TLMDKGIIDTPNLARL-QRTQEARQGAE
            +G I   +L RL +R  E  QG +
Subjt:  TLMDKGIIDTPNLARL-QRTQEARQGAE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]3.2e-1433.77Show/hide
Query:  RTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLM---DK
        RT++A+ LK  AN WI FI+  L  TTHDS++S ++++ ++ ++   +I+VGK++   I  C +++ GKLFFP+ I  L  +AGVP   +D+ +    +K
Subjt:  RTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLM---DK

Query:  GIIDTPNLARLQRTQEARQGAELGFAECSEYIAERLEGAKSAIQENREQNC
          ID   +++L+   E  +G E             L G   A++E  EQ+C
Subjt:  GIIDTPNLARLQRTQEARQGAELGFAECSEYIAERLEGAKSAIQENREQNC

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-1245.1Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT
        A  W  F+K  LL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L + G ID   +AR+  T
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT

Query:  QE
        QE
Subjt:  QE

A0A2P5BCG4 Uncharacterized protein (Fragment)6.5e-1335.37Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR-
        A  W  F+K RLL TTH  TVS+DR+L + ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L + G ID   +AR+ + 
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQR-

Query:  --TQEARQGAELGFAECSEY-----IAERLEGAKSAIQENREQNCHV
          T+  +Q +    A  S       I ++L+  +  + +   Q  H+
Subjt:  --TQEARQGAELGFAECSEY-----IAERLEGAKSAIQENREQNCHV

A0A2P5CEY2 Uncharacterized protein2.9e-1345.19Show/hide
Query:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT
        A  W  F+K RLL TTH  TVS+DR+L ++++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P   N+  L   G ID   +AR+  T
Subjt:  ANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRT

Query:  QEAR
        QE +
Subjt:  QEAR

A0A2P5CPE8 Uncharacterized protein7.2e-1237.76Show/hide
Query:  LKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLAR
        L   A  W  F+K RLL TTH  TVS++RVL ++++L   SI+VG+II  EI     +K G LFFP+ IT +C  A  P   N+  L + G ID   +AR
Subjt:  LKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLAR

Query:  LQRTQEA----RQGAELGFAECSEYIAERLEGAKSAIQENREQ
        + +   A    R  +    A  S   +E L+  KS  Q   +Q
Subjt:  LQRTQEA----RQGAELGFAECSEYIAERLEGAKSAIQENREQ

A0A5D2B8V0 Uncharacterized protein5.5e-1238.28Show/hide
Query:  ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDV
        I N+G    + Q  YLK  A  W  F++   +  +H ST+S + +L ++AIL   SI+VGKII  EI +C +KK    +FP+ IT LC +A V + AN  
Subjt:  ITNHGWKKRTFQAAYLKREANTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDV

Query:  TLMDKGIIDTPNLARL-QRTQEARQGAE
            +G I   +L RL +R  E  QG +
Subjt:  TLMDKGIIDTPNLARL-QRTQEARQGAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAATGAGAGGAAGAAGGGAAAGAGACAATGAGGAAGAAGAGGTACCAGTTACCCCTGAAGTACCGAAGATGAAAGCAAAGAAAAAGAAAATGCCGAAGGAAAA
GGAAGCTAAAAGAAGGAAAAGACAACAGAAGGCTGAGGTTGATGAGGTAGTACAACAGGCAGTAGAAGATATTGCTGAGGTGGTTGTTGAAGAGAATCCAAAGAAACCTG
AGGAACAAAATCCTAGACAAACTGAGCCGACAGTCGGAAATTCGCAAGAAATTCAAGAAAAACGAGCAGAGGATGAGCCAGAGGGAGGAGTTCCACAGGGATTTCAAGAG
CAAGAAGCTCGAGTTGAGGTTATTATGCCGGAGGTGCCCCGTCGTAGCCGTCGAAAGCAGAAAGCCGGCCGTGTCAAGATGGAAGATAAGGGCAAAGGTATTGCTGAAGC
ATCGGCTGAGGCTGAGAATCTTGATGCTGAGGAGCCACGGTTGCCGTACAACCGCTTCATCAATAATCTTGCCCGAGCAAAGTACATACAAATGTTGAAAAGAGACTTTT
TGTTTGAGTGGGGATTTGGCGATGATCTGCCGCGTTTCTTGAGAACAGGAATAACAAACCATGGCTGGAAAAAGCGTACATTTCAAGCAGCTTACCTGAAGAGGGAAGCC
AATACATGGATAGGCTTCATCAAGTTGCGCTTACTGCTGACAACTCACGATTCAACGGTGTCTCGAGATAGGGTACTTCCTGTGTTTGCTATTCTGCATTCCATGAGCAT
TGATGTGGGCAAAATAATTTCCAATGAGATTTTTGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACAATGTTATGCCAAAGGGCAGGGGTTC
CAATGAATGCGAATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGCAGAGCTTGGTTTT
GCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGATCCAGGAAAACAGGGAGCAAAACTGCCACGTCAAAGCTCGTTATCCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAATGAGAGGAAGAAGGGAAAGAGACAATGAGGAAGAAGAGGTACCAGTTACCCCTGAAGTACCGAAGATGAAAGCAAAGAAAAAGAAAATGCCGAAGGAAAA
GGAAGCTAAAAGAAGGAAAAGACAACAGAAGGCTGAGGTTGATGAGGTAGTACAACAGGCAGTAGAAGATATTGCTGAGGTGGTTGTTGAAGAGAATCCAAAGAAACCTG
AGGAACAAAATCCTAGACAAACTGAGCCGACAGTCGGAAATTCGCAAGAAATTCAAGAAAAACGAGCAGAGGATGAGCCAGAGGGAGGAGTTCCACAGGGATTTCAAGAG
CAAGAAGCTCGAGTTGAGGTTATTATGCCGGAGGTGCCCCGTCGTAGCCGTCGAAAGCAGAAAGCCGGCCGTGTCAAGATGGAAGATAAGGGCAAAGGTATTGCTGAAGC
ATCGGCTGAGGCTGAGAATCTTGATGCTGAGGAGCCACGGTTGCCGTACAACCGCTTCATCAATAATCTTGCCCGAGCAAAGTACATACAAATGTTGAAAAGAGACTTTT
TGTTTGAGTGGGGATTTGGCGATGATCTGCCGCGTTTCTTGAGAACAGGAATAACAAACCATGGCTGGAAAAAGCGTACATTTCAAGCAGCTTACCTGAAGAGGGAAGCC
AATACATGGATAGGCTTCATCAAGTTGCGCTTACTGCTGACAACTCACGATTCAACGGTGTCTCGAGATAGGGTACTTCCTGTGTTTGCTATTCTGCATTCCATGAGCAT
TGATGTGGGCAAAATAATTTCCAATGAGATTTTTGATTGCTGGCGGAAAAAGGTTGGGAAGCTGTTTTTCCCGAACACCATAACAATGTTATGCCAAAGGGCAGGGGTTC
CAATGAATGCGAATGATGTCACTCTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGCAGAGCTTGGTTTT
GCAGAATGCTCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGATCCAGGAAAACAGGGAGCAAAACTGCCACGTCAAAGCTCGTTATCCATTTTAA
Protein sequenceShow/hide protein sequence
MAKMRGRRERDNEEEEVPVTPEVPKMKAKKKKMPKEKEAKRRKRQQKAEVDEVVQQAVEDIAEVVVEENPKKPEEQNPRQTEPTVGNSQEIQEKRAEDEPEGGVPQGFQE
QEARVEVIMPEVPRRSRRKQKAGRVKMEDKGKGIAEASAEAENLDAEEPRLPYNRFINNLARAKYIQMLKRDFLFEWGFGDDLPRFLRTGITNHGWKKRTFQAAYLKREA
NTWIGFIKLRLLLTTHDSTVSRDRVLPVFAILHSMSIDVGKIISNEIFDCWRKKVGKLFFPNTITMLCQRAGVPMNANDVTLMDKGIIDTPNLARLQRTQEARQGAELGF
AECSEYIAERLEGAKSAIQENREQNCHVKARYPF