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Spg027343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3
Genome locationscaffold7:42066809..42071690
RNA-Seq ExpressionSpg027343
SyntenySpg027343
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004177 - aminopeptidase activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048579.1 putative transposase [Cucumis melo var. makuwa]5.3e-1176Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDE S
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
KAA0067919.1 zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo var. makuwa]1.1e-1165Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D+ EEIDE   E + +   W
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
TYK04294.1 zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo var. makuwa]8.2e-1265.62Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGWVVST
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDEV   L      WV+ T
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGWVVST
TYK27167.1 putative transposase [Cucumis melo var. makuwa]5.3e-1176Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDE S
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
XP_008464607.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo]1.1e-1165Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D+ EEIDE   E + +   W
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
TrEMBL top hitse value%identityAlignment
A0A1S3CNE8 zinc finger BED domain-containing protein RICESLEEPER 4-like5.2e-1265Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D+ EEIDE   E + +   W
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
A0A5A7U566 Putative transposase2.6e-1176Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDE S
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
A0A5A7VRX9 Zinc finger BED domain-containing protein RICESLEEPER 4-like5.2e-1265Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D+ EEIDE   E + +   W
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGW
A0A5D3BZ93 Zinc finger BED domain-containing protein RICESLEEPER 4-like4.0e-1265.62Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGWVVST
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDEV   L      WV+ T
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVSSELVRVSLGWVVST
A0A5D3DTS4 Putative transposase2.6e-1176Show/hide
Query:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
        TG +VLD+FRSSLTPQ  E LICAQ+WIQSKPLDDM EE+D  EEIDE S
Subjt:  TGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEEIDEVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTGCCCTCTCTATGGTGCGAGAGGGATTTCTGTTTGATGATTGGACCTCAAATAGGTTTTTCATTAGAGGAGCACTGGGTACTTACGGATATAGATGTAACCCA
GGGCAAAGGAATCCTTTGTGGTTGCTGTAATTTTATGCAAAACTCCAAAGAGAAGGTATTTTTCGGTCGAGACTTCAAGCGTGACACTGGAGAACAAGTATTAGATAATT
TTCGAAGTTCACTAACTCCTCAAAATGAAGAGACCCTCATTTGTGCTCAAAGTTGGATTCAATCTAAACCTCTTGATGATATGAGGGAGGAAGTTGATAAAGTTGAAGAA
ATTGATGAAGTTAGCTCTGAATTGGTTCGAGTCTCATTGGGTTGGGTTGTCAGTACAATCGACCCAGATTGGGTTAGGTTGTTAGAAGATGTGAAGATTGCGCCTGAAAT
GCACCTGTATTCAAATAAGGAAAGATGCCTCAGCTTAAGGCAGAATGCATCAAAACAGGGTTGCACGAGAAATGCGTCGCATTTGCAAGCGCAACTGGGCAGCTCCAACA
GAATTTCGAGATTGGCGGGATTTGTAGAATATCTTCCAAAGATCAAATATTATGAACCAAATCTCCACGGATCATGGGATTATACTCAAAGAAGGCTCCTCACACTGATC
TTAGCAGAAAACCCTACCTTCCAAGCTGGTGGCCAAAAGGTGCAATTCGGTAGCAATCTGCTTGCACCACAGAAGTGTGTGGGCACCTATAGGCAACATTTTCTAAATTG
TCTTGCACTTGCGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTGCCCTCTCTATGGTGCGAGAGGGATTTCTGTTTGATGATTGGACCTCAAATAGGTTTTTCATTAGAGGAGCACTGGGTACTTACGGATATAGATGTAACCCA
GGGCAAAGGAATCCTTTGTGGTTGCTGTAATTTTATGCAAAACTCCAAAGAGAAGGTATTTTTCGGTCGAGACTTCAAGCGTGACACTGGAGAACAAGTATTAGATAATT
TTCGAAGTTCACTAACTCCTCAAAATGAAGAGACCCTCATTTGTGCTCAAAGTTGGATTCAATCTAAACCTCTTGATGATATGAGGGAGGAAGTTGATAAAGTTGAAGAA
ATTGATGAAGTTAGCTCTGAATTGGTTCGAGTCTCATTGGGTTGGGTTGTCAGTACAATCGACCCAGATTGGGTTAGGTTGTTAGAAGATGTGAAGATTGCGCCTGAAAT
GCACCTGTATTCAAATAAGGAAAGATGCCTCAGCTTAAGGCAGAATGCATCAAAACAGGGTTGCACGAGAAATGCGTCGCATTTGCAAGCGCAACTGGGCAGCTCCAACA
GAATTTCGAGATTGGCGGGATTTGTAGAATATCTTCCAAAGATCAAATATTATGAACCAAATCTCCACGGATCATGGGATTATACTCAAAGAAGGCTCCTCACACTGATC
TTAGCAGAAAACCCTACCTTCCAAGCTGGTGGCCAAAAGGTGCAATTCGGTAGCAATCTGCTTGCACCACAGAAGTGTGTGGGCACCTATAGGCAACATTTTCTAAATTG
TCTTGCACTTGCGGAGTAA
Protein sequenceShow/hide protein sequence
MALPSLWCERDFCLMIGPQIGFSLEEHWVLTDIDVTQGKGILCGCCNFMQNSKEKVFFGRDFKRDTGEQVLDNFRSSLTPQNEETLICAQSWIQSKPLDDMREEVDKVEE
IDEVSSELVRVSLGWVVSTIDPDWVRLLEDVKIAPEMHLYSNKERCLSLRQNASKQGCTRNASHLQAQLGSSNRISRLAGFVEYLPKIKYYEPNLHGSWDYTQRRLLTLI
LAENPTFQAGGQKVQFGSNLLAPQKCVGTYRQHFLNCLALAE