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Spg027363 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027363
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLow temperature and salt responsive protein family
Genome locationscaffold7:43402811..43406374
RNA-Seq ExpressionSpg027363
SyntenySpg027363
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28088.1 Low temperature and salt responsive protein family1.4e-0447.92Show/hide
Query:  VAVNHSSLGACLNFNCCTVEFSVFDFDCTRLRSIPGIIYTLYAIVFVE
        +A+    LG CL   CCT EF +     T L  +PGIIY LYAIV+V+
Subjt:  VAVNHSSLGACLNFNCCTVEFSVFDFDCTRLRSIPGIIYTLYAIVFVE
AT4G30650.1 Low temperature and salt responsive protein family6.7e-0452.17Show/hide
Query:  VAVNHSSLGACLNFNCCTVEFSVFDFDCTRLRSIPGIIYTLYAIVF
        +A+    LG CL   CCTVEF +     T L  IPGIIY LY IVF
Subjt:  VAVNHSSLGACLNFNCCTVEFSVFDFDCTRLRSIPGIIYTLYAIVF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTTTGGGTGGTTGCCAGTCCGGTTCAAGTAGTTATTGGTCTGAACACTCTCCCTTTTTGTCCGTCCTCAGTTGTTCGTCGATCGTGATCACTAGCTCG
CAGGTCGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCAATTTCAATTGTTGCACGGTGGAATTTTCTGTGTTTGATTTTGACTGCACTCGATTACGTTCCATT
CCAGGGATCATCTACACTCTCTATGCCATTGTCTTCGTCGAGTATGCCCGCAGTGATCTTGCTGAGCCTCAAATTAGCATAATTATTTTGTCTCTTTCTTTTGTA
GGAAATCATGGCAATAGTACTAGAACTGTTGTAACTGTTGTGGTGTCTATCGTTTCAACCATCATTCTCATTGTTGGCATTTGCTTTGAGATTGAGGAAGCGAAA
GCACAAAAGACCATTACAAAAATTAGAAATGCTTTTGACAAATCACTTAGAGCAGGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCTAGTAGTTGATGGT
ACACTTTACATGAACGAGGAGGAGATTTTGTGCAAGTTTTTGGACCAAAGAAGAATGGACGTGTTCGTGGTTATGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTTTGGGTGGTTGCCAGTCCGGTTCAAGTAGTTATTGGTCTGAACACTCTCCCTTTTTGTCCGTCCTCAGTTGTTCGTCGATCGTGATCACTAGCTCG
CAGGTCGCCGTCAACCATTCATCCCTCGGAGCTTGCCTCAATTTCAATTGTTGCACGGTGGAATTTTCTGTGTTTGATTTTGACTGCACTCGATTACGTTCCATT
CCAGGGATCATCTACACTCTCTATGCCATTGTCTTCGTCGAGTATGCCCGCAGTGATCTTGCTGAGCCTCAAATTAGCATAATTATTTTGTCTCTTTCTTTTGTA
GGAAATCATGGCAATAGTACTAGAACTGTTGTAACTGTTGTGGTGTCTATCGTTTCAACCATCATTCTCATTGTTGGCATTTGCTTTGAGATTGAGGAAGCGAAA
GCACAAAAGACCATTACAAAAATTAGAAATGCTTTTGACAAATCACTTAGAGCAGGATTGTTGAAGTCGGAACTCAAATCATATGCTTCTCTAGTAGTTGATGGT
ACACTTTACATGAACGAGGAGGAGATTTTGTGCAAGTTTTTGGACCAAAGAAGAATGGACGTGTTCGTGGTTATGGAGTAG
Protein sequenceShow/hide protein sequence
MGSLGGCQSGSSSYWSEHSPFLSVLSCSSIVITSSQVAVNHSSLGACLNFNCCTVEFSVFDFDCTRLRSIPGIIYTLYAIVFVEYARSDLAEPQISIIILSLSFV
GNHGNSTRTVVTVVVSIVSTIILIVGICFEIEEAKAQKTITKIRNAFDKSLRAGLLKSELKSYASLVVDGTLYMNEEEILCKFLDQRRMDVFVVME