; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027415 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027415
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold7:41172033..41174451
RNA-Seq ExpressionSpg027415
SyntenySpg027415
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157194.1 uncharacterized protein LOC111023968 [Momordica charantia]4.9e-2453.91Show/hide
Query:  LSGSNFSLSGSPKLG--RFRLFLFGL-VMFKPWEVRFESNQAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLH
        +S SN  L  S KL    +R++   L  +    ++RF   + EC P   P   R  RD YDRW +AN+KA VYIL SISDVLSKKHEG+   REIMDSL 
Subjt:  LSGSNFSLSGSPKLG--RFRLFLFGL-VMFKPWEVRFESNQAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLH

Query:  AMFGQPSSSLSHKALKYVYNSRMKEGTS
        A+FGQPS+S+ H A+KYVYN RMKEG+S
Subjt:  AMFGQPSSSLSHKALKYVYNSRMKEGTS

XP_022158568.1 uncharacterized protein LOC111025021 [Momordica charantia]4.5e-2568.6Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        EC P P P   R  RD YDRW +AN+KA+VYIL SIS+VLSKKHE + TTREIMDSL A+FGQPS++L H A+KYVYN RMKEG+S
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

XP_022158791.1 uncharacterized protein LOC111025258 [Momordica charantia]1.4e-2366.28Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        EC P   P   +  RD +DRW +AN+KA+VYIL SISDVLSKKHEG+ T REIMDSL A+FGQPS+S+ H A+KYVYN RMKEG+S
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

XP_022159023.1 uncharacterized protein LOC111025468 [Momordica charantia]3.2e-2364.37Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTSA
        EC P P P   R  R+ YDRW +ANDKA+VYIL SISDVLSKKHE + T RE+MDSL A+ GQP +S+ H A++YVYN RMKEG+SA
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTSA

XP_038889092.1 uncharacterized protein LOC120079003 [Benincasa hispida]2.4e-2365.12Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        EC P+ GP   R  RDVYDRW +AN+KA+VYIL +ISD+LSKKHE + T REIMDSL  +FGQPS+   H A+K+VYN RMKEGTS
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

TrEMBL top hitse value%identityAlignment
A0A6J1DMS3 uncharacterized protein LOC1110220001.5e-2364.77Show/hide
Query:  QAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        Q +C   P P  T   R+ YDRW +ANDKAKVYIL+SISDVL+KKHE   T +EIMDSL +MFGQPSS   H+ALK+VYNSRMK+G+S
Subjt:  QAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

A0A6J1DVT6 uncharacterized protein LOC1110239682.4e-2453.91Show/hide
Query:  LSGSNFSLSGSPKLG--RFRLFLFGL-VMFKPWEVRFESNQAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLH
        +S SN  L  S KL    +R++   L  +    ++RF   + EC P   P   R  RD YDRW +AN+KA VYIL SISDVLSKKHEG+   REIMDSL 
Subjt:  LSGSNFSLSGSPKLG--RFRLFLFGL-VMFKPWEVRFESNQAECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLH

Query:  AMFGQPSSSLSHKALKYVYNSRMKEGTS
        A+FGQPS+S+ H A+KYVYN RMKEG+S
Subjt:  AMFGQPSSSLSHKALKYVYNSRMKEGTS

A0A6J1DWG6 uncharacterized protein LOC1110250212.2e-2568.6Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        EC P P P   R  RD YDRW +AN+KA+VYIL SIS+VLSKKHE + TTREIMDSL A+FGQPS++L H A+KYVYN RMKEG+S
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

A0A6J1DXP1 uncharacterized protein LOC1110254681.5e-2364.37Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTSA
        EC P P P   R  R+ YDRW +ANDKA+VYIL SISDVLSKKHE + T RE+MDSL A+ GQP +S+ H A++YVYN RMKEG+SA
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTSA

A0A6J1E205 uncharacterized protein LOC1110252586.9e-2466.28Show/hide
Query:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS
        EC P   P   +  RD +DRW +AN+KA+VYIL SISDVLSKKHEG+ T REIMDSL A+FGQPS+S+ H A+KYVYN RMKEG+S
Subjt:  ECSPNPGPTRTRVNRDVYDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGAAAGGGAAAGGAGTCCATTTAGTACTGTAATTGATCGAAAGAAGGAAAAGAACTCAAGCTGGCCGAAGAACAGAGGGCTTCCAATCGCGACGCAGTTCAT
CAAGCGTCTCGACGCTAATGAGTTTTCAAGAACAGGCACAAATTTTCCACATTTGAGTGGTTCAAACTTTTCCCTGTCCGGTTCACCAAAACTCGGTCGGTTCAGACTCT
TTTTGTTCGGTTTAGTGATGTTCAAGCCTTGGGAGGTCCGATTCGAGTCCAATCAAGCCGAATGTTCGCCCAACCCTGGCCCGACAAGAACTCGAGTGAATCGAGACGTC
TATGACAGGTGGACTAGAGCCAATGATAAGGCAAAGGTCTACATCCTGACAAGCATAAGTGATGTTCTGTCTAAAAAGCACGAAGGCATGGAAACAACAAGGGAAATAAT
GGACTCATTGCATGCCATGTTTGGACAGCCGTCCTCATCCCTCAGCCATAAGGCCCTCAAATACGTTTATAATTCTCGGATGAAAGAAGGAACTTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGAAAGGGAAAGGAGTCCATTTAGTACTGTAATTGATCGAAAGAAGGAAAAGAACTCAAGCTGGCCGAAGAACAGAGGGCTTCCAATCGCGACGCAGTTCAT
CAAGCGTCTCGACGCTAATGAGTTTTCAAGAACAGGCACAAATTTTCCACATTTGAGTGGTTCAAACTTTTCCCTGTCCGGTTCACCAAAACTCGGTCGGTTCAGACTCT
TTTTGTTCGGTTTAGTGATGTTCAAGCCTTGGGAGGTCCGATTCGAGTCCAATCAAGCCGAATGTTCGCCCAACCCTGGCCCGACAAGAACTCGAGTGAATCGAGACGTC
TATGACAGGTGGACTAGAGCCAATGATAAGGCAAAGGTCTACATCCTGACAAGCATAAGTGATGTTCTGTCTAAAAAGCACGAAGGCATGGAAACAACAAGGGAAATAAT
GGACTCATTGCATGCCATGTTTGGACAGCCGTCCTCATCCCTCAGCCATAAGGCCCTCAAATACGTTTATAATTCTCGGATGAAAGAAGGAACTTCTGCTTGA
Protein sequenceShow/hide protein sequence
MMEERERSPFSTVIDRKKEKNSSWPKNRGLPIATQFIKRLDANEFSRTGTNFPHLSGSNFSLSGSPKLGRFRLFLFGLVMFKPWEVRFESNQAECSPNPGPTRTRVNRDV
YDRWTRANDKAKVYILTSISDVLSKKHEGMETTREIMDSLHAMFGQPSSSLSHKALKYVYNSRMKEGTSA