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Spg027419 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027419
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold7:42850814..42851989
RNA-Seq ExpressionSpg027419
SyntenySpg027419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]6.2e-0428.03Show/hide
Query:  KPKAKSPKAQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKE
        K + ++ +    K     + K      +VR+FY G    +     ++ + V FS+ DIN +Y++K   +  GN  I +P+ +QM++AL+++   G++W  
Subjt:  KPKAKSPKAQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKE

Query:  SQTKVKTLVSSDLKPESILDRIEDKLKAYWVY
        S   V TL S  L  E  L          WVY
Subjt:  SQTKVKTLVSSDLKPESILDRIEDKLKAYWVY

XP_038885414.1 nucleolar protein 58-like [Benincasa hispida]4.8e-0431.54Show/hide
Query:  KAKSPKAQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQ
        KAK  +A SP+       KD  +  +V  FY G    +      +G+ V FS+ DIN +Y+++      G+  I +P  + M++ALK++A  G++W  S 
Subjt:  KAKSPKAQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQ

Query:  TKVKTLVSSDLKPESILDRIEDKLKAYWVY
          ++TL S  L PE  L          WVY
Subjt:  TKVKTLVSSDLKPESILDRIEDKLKAYWVY

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.2e-0732.33Show/hide
Query:  KPKAKSPK-AQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWK
        KPK  S + A + + L  +   D+ ++ +VR FY G   ++    +++G  V FS+ DIN +Y++K  L   GN  I +P    M++ L+++   G QW 
Subjt:  KPKAKSPK-AQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWK

Query:  ESQTKVKTLVSSDLKPESILDRIEDKLKAYWVY
         S   +KTL S+ L PE+ L          WVY
Subjt:  ESQTKVKTLVSSDLKPESILDRIEDKLKAYWVY

XP_038902322.1 protein PXR1-like [Benincasa hispida]2.1e-0432.61Show/hide
Query:  LVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESIL
        +VR+FY G   E+      +G+ V FS+ DIN +Y++K  L   GN  +++P+ + M +AL+++     +W  S   + TL    L PE  L
Subjt:  LVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESIL

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]6.0e-0734.51Show/hide
Query:  VVP-LVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESILDRIE
        ++P +VR FY G    +    +++G +V FS+ DIN +Y++K      GN  I +P  ++M++AL+ +   G QW  S   +KTL SS L PE+ L    
Subjt:  VVP-LVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESILDRIE

Query:  DKLKAYWVYAKER
              WVY  +R
Subjt:  DKLKAYWVYAKER

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGTAGTTCCTCCTACCTCCACACCTGTCAAACCGAAAGCCAAATCTCCTAAAGCTCAATCACCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGA
GGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGACTGAGGGAAGAGAGCATGAGCATGGCAATGGTGAGAGGCAAGATGGTCAAGTTCTCTTCTGTCGACATCAATA
GGGTGTACAGGATCAAAACACCCTTACATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGTCAAGCAGATGAAAGAAGCATTGAAATTAGTAGCCAACAAGGGTGTT
CAATGGAAGGAGTCCCAAACAAAGGTGAAGACATTAGTGTCAAGCGATCTCAAGCCAGAATCGATACTAGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGC
CAAGGAGAGAGATGAAGCTATTAGAGAGTTTTACATCTCTATCGCCCCCAACATCGCCCTTGTGTTTCCTGATTTCCCTCAATCACTGCTGCCTCAAGAAGAGAAAGAAT
CTGATGAAGATGAAGATGAAAGAGAGAGTTCCTCGAACGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGTAGTTCCTCCTACCTCCACACCTGTCAAACCGAAAGCCAAATCTCCTAAAGCTCAATCACCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGA
GGCCGTGGTGCCTTTAGTTCGAGAATTCTATGCTGGACTGAGGGAAGAGAGCATGAGCATGGCAATGGTGAGAGGCAAGATGGTCAAGTTCTCTTCTGTCGACATCAATA
GGGTGTACAGGATCAAAACACCCTTACATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGGTCAAGCAGATGAAAGAAGCATTGAAATTAGTAGCCAACAAGGGTGTT
CAATGGAAGGAGTCCCAAACAAAGGTGAAGACATTAGTGTCAAGCGATCTCAAGCCAGAATCGATACTAGACCGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGC
CAAGGAGAGAGATGAAGCTATTAGAGAGTTTTACATCTCTATCGCCCCCAACATCGCCCTTGTGTTTCCTGATTTCCCTCAATCACTGCTGCCTCAAGAAGAGAAAGAAT
CTGATGAAGATGAAGATGAAAGAGAGAGTTCCTCGAACGAGGAATAG
Protein sequenceShow/hide protein sequence
MDASPVVPPTSTPVKPKAKSPKAQSPKNLFPEVFKDEAVVPLVREFYAGLREESMSMAMVRGKMVKFSSVDINRVYRIKTPLHPRGNDAIKNPSVKQMKEALKLVANKGV
QWKESQTKVKTLVSSDLKPESILDRIEDKLKAYWVYAKERDEAIREFYISIAPNIALVFPDFPQSLLPQEEKESDEDEDERESSSNEE