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Spg027447 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027447
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold7:42220065..42228156
RNA-Seq ExpressionSpg027447
SyntenySpg027447
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]4.8e-3952.08Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I ++ ++  C P D+I Y +  HG+NISYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   R
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.2e-3649.31Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I ++ ++  C P ++I Y +  H +N+SYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D    
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM  AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

TYK21259.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]6.9e-3842Show/hide
Query:  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTH
        P + +  + D VPV++      +   +PR EDSR +               +  + ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  H
Subjt:  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTH

Query:  GINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        G NISYDKAWRG E  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI V+G ++KNK+ GTL++ACT +
Subjt:  GINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.3e-3952.08Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG+NISYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   R
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.0e-3746.07Show/hide
Query:  EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRG
        +DPS CP  +R + +K S+        YT+    ++ +NDH+QAT+ +  E  K I +  +++ C P D+I Y +  H +NISYDKAW GRE  LN +RG
Subjt:  EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRG

Query:  SPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        +PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  SPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958999.7e-3846.07Show/hide
Query:  EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRG
        +DPS CP  +R + +K S+        YT+    ++ +NDH+QAT+ +  E  K I +  +++ C P D+I Y +  H +NISYDKAW GRE  LN +RG
Subjt:  EDPSGCPKAVRVN-YKASN--------YTNW---ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRG

Query:  SPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        +PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ CT +
Subjt:  SPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

A0A5A7V1Z6 CCHC-type domain-containing protein2.3e-3952.08Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I ++ ++  C P D+I Y +  HG+NISYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   R
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

A0A5A7VAU3 MuDRA-like transposase1.1e-3649.31Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I ++ ++  C P ++I Y +  H +N+SYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D    
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM  AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

A0A5D3DDB9 Protein FAR1-RELATED SEQUENCE 43.3e-3842Show/hide
Query:  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTH
        P + +  + D VPV++      +   +PR EDSR +               +  + ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  H
Subjt:  PSDGMDALTDIVPVSE-----GIPQSVPRPEDSREDPSGCPKAVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTH

Query:  GINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        G NISYDKAWRG E  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   RFKF+FM+ AA ID W +C+ VI V+G ++KNK+ GTL++ACT +
Subjt:  GINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

A0A5D3E198 MuDRA-like transposase3.0e-3952.08Show/hide
Query:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR
        ++ +NDH+QAT+ +  E  K I +  ++  C P D+I Y +  HG+NISYDKAWRGRE  LN +RG+PE+SYA + AF+  LI  NPGTYTA + D   R
Subjt:  ELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDIDSNDR

Query:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE
        FKF+FM+ AA ID W +C+ VI VDG ++KNK+ GTL++ACT +
Subjt:  FKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTACACGAACGCGTTGGATCATTGCGTTTGTATCCAAATACAAAGCGGGTCGTATCCATAGTGTCACTAGGATAAGAATCTTGGAGCTAAATCCATATCTTGA
GTCATTTTCTACTCCACAGTGGGTCTTTGTTGTTGATATCCTTGTTGATATTTTGTCTTGCTGCTTTCTCCTTGGCGGTATTGTTGATCTTTCCCCCAATCTGTTTGTGC
CATCAGATGGGATGGACGCATTGACCGACATAGTACCTGTATCGGAGGGGATCCCACAATCCGTTCCAAGGCCTGAGGATAGTAGAGAAGATCCAAGTGGTTGTCCAAAA
GCTGTTCGTGTGAATTATAAAGCATCGAATTATACGAATTGGGAGCTTCAAGAGAATGATCACAGGCAAGCGACGACGAGTGTTGCGTGTGAGTATGCGAAGACTATAAT
GAGGATCACTAATAGGTTGCACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGAGGTAGAGAAAAGA
CGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCTCAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCATGATATTGAT
TCAAATGACAGGTTCAAATTCTTCTTCATGAGTACTGCAGCATTCATAGACGGGTGGAAACACTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATT
CAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTACACGAACGCGTTGGATCATTGCGTTTGTATCCAAATACAAAGCGGGTCGTATCCATAGTGTCACTAGGATAAGAATCTTGGAGCTAAATCCATATCTTGA
GTCATTTTCTACTCCACAGTGGGTCTTTGTTGTTGATATCCTTGTTGATATTTTGTCTTGCTGCTTTCTCCTTGGCGGTATTGTTGATCTTTCCCCCAATCTGTTTGTGC
CATCAGATGGGATGGACGCATTGACCGACATAGTACCTGTATCGGAGGGGATCCCACAATCCGTTCCAAGGCCTGAGGATAGTAGAGAAGATCCAAGTGGTTGTCCAAAA
GCTGTTCGTGTGAATTATAAAGCATCGAATTATACGAATTGGGAGCTTCAAGAGAATGATCACAGGCAAGCGACGACGAGTGTTGCGTGTGAGTATGCGAAGACTATAAT
GAGGATCACTAATAGGTTGCACTGTACACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGAGGTAGAGAAAAGA
CGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTATGCTCAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCATGATATTGAT
TCAAATGACAGGTTCAAATTCTTCTTCATGAGTACTGCAGCATTCATAGACGGGTGGAAACACTGTCTCTCGGTTATTTTTGTAGATGGTACATCTTTGAAGAATAAATT
CAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
Protein sequenceShow/hide protein sequence
MPTTRTRWIIAFVSKYKAGRIHSVTRIRILELNPYLESFSTPQWVFVVDILVDILSCCFLLGGIVDLSPNLFVPSDGMDALTDIVPVSEGIPQSVPRPEDSREDPSGCPK
AVRVNYKASNYTNWELQENDHRQATTSVACEYAKTIMRITNRLHCTPRDIIEYARKTHGINISYDKAWRGREKTLNELRGSPEESYAQIPAFAARLIERNPGTYTAHDID
SNDRFKFFFMSTAAFIDGWKHCLSVIFVDGTSLKNKFSGTLLTACTFEVRF