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Spg027466 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027466
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:20760794..20761665
RNA-Seq ExpressionSpg027466
SyntenySpg027466
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]5.8e-0636.59Show/hide
Query:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP
        W+G   +R ++  + L   A  W H++KN++MPT+H+ T+S+ R++L++ IM   P+D+G II Q + DC   K+ + L +P
Subjt:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]5.2e-0736.59Show/hide
Query:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP
        W+G   +R ++  + L   A  W H++K+++MPT+H+ T+S+ R++L++ IM   P+D+GRII Q + DC  +K+ + L +P
Subjt:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP

PIN12644.1 hypothetical protein CDL12_14745 [Handroanthus impetiginosus]1.3e-0539.13Show/hide
Query:  AQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPW
        A+ L  E  NWLH+I  R+MP TH + ++  RVVL++ I++GIP+D+G++I++ +    +    + LPW
Subjt:  AQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPW

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]5.8e-0629.76Show/hide
Query:  QMQRAMRSWDGHG--AARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKR
        ++ +A   WD H     RT  A  L   A  W+++I+  + PTTHD+++S+ +++L+YC++ G  +++G+++ +A+  C K ++
Subjt:  QMQRAMRSWDGHG--AARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKR

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]9.8e-0637.68Show/hide
Query:  WDGHGAARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDC
        W   G AR L  Q L  EA  W +++++ I P +HD  L + RV+++YCI++  P D+GR+I   +  C
Subjt:  WDGHGAARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDC

TrEMBL top hitse value%identityAlignment
A0A2G9FVU6 Uncharacterized protein5.8e-0430.53Show/hide
Query:  SWDGHGAARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWPQEAKTNYGSPSSTGCKDQ
        SW+       +P   L  EA +WL +I  R+ P++H + +S  R +L+Y I+ G+PLD+GR I+ A+    K+ R  +        + Y     T    Q
Subjt:  SWDGHGAARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWPQEAKTNYGSPSSTGCKDQ

Query:  SAKSTGAGKHCL----AQNQESLPPPPPPPP
               G   +      N+E+  PPPPPPP
Subjt:  SAKSTGAGKHCL----AQNQESLPPPPPPPP

A0A2G9H553 Uncharacterized protein6.2e-0639.13Show/hide
Query:  AQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPW
        A+ L  E  NWLH+I  R+MP TH + ++  RVVL++ I++GIP+D+G++I++ +    +    + LPW
Subjt:  AQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPW

A0A5A7V3J8 Protein MNN4-like3.1e-0552.08Show/hide
Query:  LDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRII
        L+  A+ WL +IK +++PT HD T+S+ R+VL+YCIM+ IP+D G+II
Subjt:  LDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRII

A0A5D3DVQ6 Uncharacterized protein6.9e-0552.08Show/hide
Query:  LDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRII
        L  EA+ WL +IK ++MPT HD T+S  R++L+YCIM+ IP+D+  II
Subjt:  LDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRII

A0A6A2Y697 Reverse transcriptase domain-containing protein2.5e-0736.59Show/hide
Query:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP
        W+G   +R ++  + L   A  W H++K+++MPT+H+ T+S+ R++L++ IM   P+D+GRII Q + DC  +K+ + L +P
Subjt:  WDGHGAAR-TLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCNVLPWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGTTGGTGCGTGGCCACCCAGTCGCCTTTGCCCCTGCGTGCATCAACTCCGTGTTCAAGCTTCCAGATATACCAGATGCAGAGGGCAATGCGCTCTTGGGATGG
GCATGGCGCTGCGAGGACCCTGCCGGCGCAGCTGTTGGACTTTGAGGCCACAAATTGGTTGCACTGGATAAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTAA
GCATCCCAAGGGTGGTCCTCGTCTATTGCATAATGAAGGGGATCCCACTGGACTTGGGCAGAATCATCTCCCAAGCACTGCCAGACTGCTGCAAAACCAAAAGGTGCAAT
GTTCTGCCCTGGCCTCAAGAGGCGAAAACAAACTACGGGTCGCCATCCTCCACTGGCTGCAAGGACCAATCAGCCAAATCTACCGGTGCAGGAAAACACTGTCTCGCCCA
AAATCAAGAGTCTTTGCCACCACCGCCACCACCACCGCCACCGCCGTCACCGCCTGTCATCTTCCCAACCCCTTCCATCCAGCCTAAAGAAGCCATGCTTCCAGAACAAA
TCCACGAGGCCCCATTACCTGACTCTCCTCGCAAACAAGAAATCCCCGCGCCCAGCTCCCCGCCGCAGGCCACACCATCTGCCAGCACATCTCATGCTGCGCCTGTTCCA
CAACTTGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGTTGGTGCGTGGCCACCCAGTCGCCTTTGCCCCTGCGTGCATCAACTCCGTGTTCAAGCTTCCAGATATACCAGATGCAGAGGGCAATGCGCTCTTGGGATGG
GCATGGCGCTGCGAGGACCCTGCCGGCGCAGCTGTTGGACTTTGAGGCCACAAATTGGTTGCACTGGATAAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTAA
GCATCCCAAGGGTGGTCCTCGTCTATTGCATAATGAAGGGGATCCCACTGGACTTGGGCAGAATCATCTCCCAAGCACTGCCAGACTGCTGCAAAACCAAAAGGTGCAAT
GTTCTGCCCTGGCCTCAAGAGGCGAAAACAAACTACGGGTCGCCATCCTCCACTGGCTGCAAGGACCAATCAGCCAAATCTACCGGTGCAGGAAAACACTGTCTCGCCCA
AAATCAAGAGTCTTTGCCACCACCGCCACCACCACCGCCACCGCCGTCACCGCCTGTCATCTTCCCAACCCCTTCCATCCAGCCTAAAGAAGCCATGCTTCCAGAACAAA
TCCACGAGGCCCCATTACCTGACTCTCCTCGCAAACAAGAAATCCCCGCGCCCAGCTCCCCGCCGCAGGCCACACCATCTGCCAGCACATCTCATGCTGCGCCTGTTCCA
CAACTTGATGTGTAA
Protein sequenceShow/hide protein sequence
MKCWCVATQSPLPLRASTPCSSFQIYQMQRAMRSWDGHGAARTLPAQLLDFEATNWLHWIKNRIMPTTHDATLSIPRVVLVYCIMKGIPLDLGRIISQALPDCCKTKRCN
VLPWPQEAKTNYGSPSSTGCKDQSAKSTGAGKHCLAQNQESLPPPPPPPPPPSPPVIFPTPSIQPKEAMLPEQIHEAPLPDSPRKQEIPAPSSPPQATPSASTSHAAPVP
QLDV