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Spg027471 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027471
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold13:19879367..19881443
RNA-Seq ExpressionSpg027471
SyntenySpg027471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]5.4e-1733.02Show/hide
Query:  REIKAERK-TRNKNDPIFAKRPRTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLSS--
        R++ A RK   N  +  + +    R++      L   SP  G  P F++ VI    WQ FC HP + +VPLV+EFYA L+ +  +   V    ++ +S  
Subjt:  REIKAERK-TRNKNDPIFAKRPRTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLSS--

Query:  -------------------------MKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGS
                                 +KE LK +A  G QW  S     T    +L+P + VW HFL +RL+L+TH  TIS +R +LLY ++ G  IN+G 
Subjt:  -------------------------MKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGS

Query:  IIRDEILACGRK
        +I D+I AC  K
Subjt:  IIRDEILACGRK

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]5.4e-1735.76Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGL---------------------------REESISMAVVRGKMVSLSSMKEALKLVANKGVQWKESQ
        P F+TRVI Q+ W++FC HP   +VPLVREFYA L                            EE +   V     V+   ++  L  VA +G  W+ S 
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGL---------------------------REESISMAVVRGKMVSLSSMKEALKLVANKGVQWKESQ

Query:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILAC
            T +  +LK  + +W HFL  R M +TH  T++ DRV+LLY I+ G+ +NI  I   EI AC
Subjt:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILAC

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.2e-2135.26Show/hide
Query:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------
        + R ++A    +   S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS S                         
Subjt:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------

Query:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
           +   L+ VA  G +W  S     T + S L P + VW HFLK+ L+ TTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  +
Subjt:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.6e-2235.79Show/hide
Query:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------
        + R ++A    +   S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS S                         
Subjt:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------

Query:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
           +   L+ VA  G +W  S     T + S L P + VW HFLK+RL+ TTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  +
Subjt:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.5e-1936.31Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS---------------------------SMKEALKLVANKGVQWKESQ
        P F+  VI Q+ WQ FCAHP++ +VPLVREFY  +         +RG  V LS                            +   L+ VA  G +W  S 
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS---------------------------SMKEALKLVANKGVQWKESQ

Query:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
            T + S L P + VW HFLK+RL+ TTH  T+S + V LLY ++ G  IN+G +I  EI AC  +
Subjt:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.0e-2135.26Show/hide
Query:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------
        + R ++A    +   S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS S                         
Subjt:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------

Query:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
           +   L+ VA  G +W  S     T + S L P + VW HFLK+ L+ TTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  +
Subjt:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

A0A2P5BCG4 Uncharacterized protein (Fragment)4.6e-2235.79Show/hide
Query:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------
        + R ++A    +   S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFYA L +   +   VRG  VS S                         
Subjt:  RTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS-------------------------

Query:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
           +   L+ VA  G +W  S     T + S L P + VW HFLK+RL+ TTH  T+S DR++LL+ ++ G  IN+G +I  EI AC  +
Subjt:  --SMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

A0A2P5DAQ2 Uncharacterized protein7.4e-2036.31Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS---------------------------SMKEALKLVANKGVQWKESQ
        P F+  VI Q+ WQ FCAHP++ +VPLVREFY  +         +RG  V LS                            +   L+ VA  G +W  S 
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLS---------------------------SMKEALKLVANKGVQWKESQ

Query:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK
            T + S L P + VW HFLK+RL+ TTH  T+S + V LLY ++ G  IN+G +I  EI AC  +
Subjt:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK

W9QTD9 Uncharacterized protein2.6e-1735.76Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGL---------------------------REESISMAVVRGKMVSLSSMKEALKLVANKGVQWKESQ
        P F+TRVI Q+ W++FC HP   +VPLVREFYA L                            EE +   V     V+   ++  L  VA +G  W+ S 
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGL---------------------------REESISMAVVRGKMVSLSSMKEALKLVANKGVQWKESQ

Query:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILAC
            T +  +LK  + +W HFL  R M +TH  T++ DRV+LLY I+ G+ +NI  I   EI AC
Subjt:  TKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILAC

W9RBS1 Uncharacterized protein2.6e-1733.02Show/hide
Query:  REIKAERK-TRNKNDPIFAKRPRTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLSS--
        R++ A RK   N  +  + +    R++      L   SP  G  P F++ VI    WQ FC HP + +VPLV+EFYA L+ +  +   V    ++ +S  
Subjt:  REIKAERK-TRNKNDPIFAKRPRTRSMDASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLSS--

Query:  -------------------------MKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGS
                                 +KE LK +A  G QW  S     T    +L+P + VW HFL +RL+L+TH  TIS +R +LLY ++ G  IN+G 
Subjt:  -------------------------MKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLHFLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGS

Query:  IIRDEILACGRK
        +I D+I AC  K
Subjt:  IIRDEILACGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACGCAAAATCCATCATCATCACACAAGATTACTCGTTGTCAGAGTAATCCAACCGCCCACGAAGCTGAAGCAAGTGTTCGACAGCAAGAGGAGAACCCCAA
AACACCCATGCACTACACACGAAGGACAAGACCCACAGACCACGTCGAGGGAGAATCCGAGTTCGTCTTCACTGAGAAGGTCCATGCGCGCCACTTCCGTCCGCCAAACC
CAAAACCTGCCACTCAACAGTTTAGAAAACGTTCGCGGGAGTGGTTTTCAATGATCTGGGCGATGAGAGCTCAGAGACGTGCTGCTTTTGAAGAAGAAGGATATAGGCAA
GTTGAAGAAGAAGCCGCCAAAGCAGCAGGAAGTTCTCGACAAGAGGGAACTTCAACGAGTAAAACTTCTAAACCTTCAACTAACCCCTCTTCGTCTTGCAGGACCAAACC
ATTTGTTACCTACAGTGAAAGGAAGAGGAGTCCGAAGAAGGTTGTGCCCGGGAAGCCGCTTGTTATTGAGCCCCTCAAGGTAGCAAGAATGCCTCCGGACGTGTTCGAAG
GAATAATCCGCCAAGCCGTGGCAAAGGCTCTTGTCATTGCTGAAGGATATAGGGCTGAACAAGAAGCTTTGAATGAGGTTCAGGCGGAGAGAGAGATGGAAAATCAACAC
ATGAGGGAAGAAGATGAAGGCCTAATCGAGGCCACTGAAGCTCAACCTGCTGAAGAGGTTTTCGAGCCTCTATTCAAATATGACCCACCAGCAACTGACAGCACCTCTTC
GGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGACTCTGAAACAGAGTTTGATTCAGAGATTAAGGAGCTGGATGATGACCAAGCTC
CCATGTCTGTAGCATTGAGGTGGAAGAGAAAAAGAGAGATTAAAGCTGAACGGAAGACTAGGAACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACTAGGTCCATG
GACGCCTCTTCTGTAGTTCTTCCTACCGTTTCCCCGAGAGCAGGAGCACTGCCAGAGTTCGTAACAAGAGTTATCTCCCAGTATAAGTGGCAGGAGTTCTGCGCTCACCC
TCAGGAGGCTGTAGTGCCATTAGTTAGAGAGTTTTACGCCGGCCTGAGGGAGGAAAGTATCAGTATGGCGGTTGTGAGAGGAAAAATGGTCAGCTTATCTTCAATGAAGG
AAGCATTAAAACTCGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCTCAGACAAAGGTGAAGACTCTAGTGTCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCAC
TTTCTGAAGAACCGCTTGATGCTAACCACCCACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAATATTGGGAGCAT
AATCAGGGATGAGATTCTAGCCTGTGGAAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACGCAAAATCCATCATCATCACACAAGATTACTCGTTGTCAGAGTAATCCAACCGCCCACGAAGCTGAAGCAAGTGTTCGACAGCAAGAGGAGAACCCCAA
AACACCCATGCACTACACACGAAGGACAAGACCCACAGACCACGTCGAGGGAGAATCCGAGTTCGTCTTCACTGAGAAGGTCCATGCGCGCCACTTCCGTCCGCCAAACC
CAAAACCTGCCACTCAACAGTTTAGAAAACGTTCGCGGGAGTGGTTTTCAATGATCTGGGCGATGAGAGCTCAGAGACGTGCTGCTTTTGAAGAAGAAGGATATAGGCAA
GTTGAAGAAGAAGCCGCCAAAGCAGCAGGAAGTTCTCGACAAGAGGGAACTTCAACGAGTAAAACTTCTAAACCTTCAACTAACCCCTCTTCGTCTTGCAGGACCAAACC
ATTTGTTACCTACAGTGAAAGGAAGAGGAGTCCGAAGAAGGTTGTGCCCGGGAAGCCGCTTGTTATTGAGCCCCTCAAGGTAGCAAGAATGCCTCCGGACGTGTTCGAAG
GAATAATCCGCCAAGCCGTGGCAAAGGCTCTTGTCATTGCTGAAGGATATAGGGCTGAACAAGAAGCTTTGAATGAGGTTCAGGCGGAGAGAGAGATGGAAAATCAACAC
ATGAGGGAAGAAGATGAAGGCCTAATCGAGGCCACTGAAGCTCAACCTGCTGAAGAGGTTTTCGAGCCTCTATTCAAATATGACCCACCAGCAACTGACAGCACCTCTTC
GGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGACTCTGAAACAGAGTTTGATTCAGAGATTAAGGAGCTGGATGATGACCAAGCTC
CCATGTCTGTAGCATTGAGGTGGAAGAGAAAAAGAGAGATTAAAGCTGAACGGAAGACTAGGAACAAGAATGACCCGATATTTGCCAAGAGGCCGAGGACTAGGTCCATG
GACGCCTCTTCTGTAGTTCTTCCTACCGTTTCCCCGAGAGCAGGAGCACTGCCAGAGTTCGTAACAAGAGTTATCTCCCAGTATAAGTGGCAGGAGTTCTGCGCTCACCC
TCAGGAGGCTGTAGTGCCATTAGTTAGAGAGTTTTACGCCGGCCTGAGGGAGGAAAGTATCAGTATGGCGGTTGTGAGAGGAAAAATGGTCAGCTTATCTTCAATGAAGG
AAGCATTAAAACTCGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCTCAGACAAAGGTGAAGACTCTAGTGTCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCAC
TTTCTGAAGAACCGCTTGATGCTAACCACCCACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAATATTGGGAGCAT
AATCAGGGATGAGATTCTAGCCTGTGGAAGAAAATGA
Protein sequenceShow/hide protein sequence
MKNTQNPSSSHKITRCQSNPTAHEAEASVRQQEENPKTPMHYTRRTRPTDHVEGESEFVFTEKVHARHFRPPNPKPATQQFRKRSREWFSMIWAMRAQRRAAFEEEGYRQ
VEEEAAKAAGSSRQEGTSTSKTSKPSTNPSSSCRTKPFVTYSERKRSPKKVVPGKPLVIEPLKVARMPPDVFEGIIRQAVAKALVIAEGYRAEQEALNEVQAEREMENQH
MREEDEGLIEATEAQPAEEVFEPLFKYDPPATDSTSSGEKRDEEEKESKEAETSSDSETEFDSEIKELDDDQAPMSVALRWKRKREIKAERKTRNKNDPIFAKRPRTRSM
DASSVVLPTVSPRAGALPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYAGLREESISMAVVRGKMVSLSSMKEALKLVANKGVQWKESQTKVKTLVSSDLKPESAVWLH
FLKNRLMLTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRK