; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027474 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027474
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:19513696..19518494
RNA-Seq ExpressionSpg027474
SyntenySpg027474
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.9e-2135.45Show/hide
Query:  GDLPHFLRADITNHGWELFCSK----------------SDP--------------RPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW
        G LP F+   IT H W+ FC+                 +DP                 AIN++F L D P    +E +   + ++L T +  V + GAEW
Subjt:  GDLPHFLRADITNHGWELFCSK----------------SDP--------------RPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW

Query:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT
          S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P   ++  
Subjt:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT

Query:  LIDKGIIDTSNLARLQRTQE
        L + G ID   +AR+  TQE
Subjt:  LIDKGIIDTSNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.7e-2135.35Show/hide
Query:  GDLPHFLRADITNHGWELFCSK----------------SDPRPG--------------AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW
        G LP F+   IT H W+ FC+                 +DP                 AIN++F L D P    +E +   +  +L T +  V   GAEW
Subjt:  GDLPHFLRADITNHGWELFCSK----------------SDPRPG--------------AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW

Query:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT
          S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P   ++  
Subjt:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT

Query:  LIDKGIIDTSNLARL
        L + G ID   +AR+
Subjt:  LIDKGIIDTSNLARL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.1e-1941.4Show/hide
Query:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV
        AIN+++ L D P    +E V A +  EL+T +  V I GAEW  S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+V
Subjt:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV

Query:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARL
        G+II  EI     +K G LFFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.6e-1841.36Show/hide
Query:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV
        AIN++F L D P    +E +   +  EL T +  V   GAEW  S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L+  SI+V
Subjt:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV

Query:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARLQRTQE
        G++I SEI  C  +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARLQRTQE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]3.0e-1833.16Show/hide
Query:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW-RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSID
        AIN L  L       F  +  +SS  +L    RE+G  G  W   S    RT++ + LK  AN W+ FI+  L PTTHD ++S ++++L++ ++   +I+
Subjt:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW-RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSID

Query:  VGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTL---IDKGIIDTSNLARLQRTQEARQGGLVCDIHQMQEQLLMHSSRM
        VGK++   I  C +++ GKLFFP+ I  L  +AGVP   DD+ +    +K  ID   +++L+   E  +G  +  + +  E+LL  S  M
Subjt:  VGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTL---IDKGIIDTSNLARLQRTQEARQGGLVCDIHQMQEQLLMHSSRM

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.4e-2135.45Show/hide
Query:  GDLPHFLRADITNHGWELFCSK----------------SDP--------------RPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW
        G LP F+   IT H W+ FC+                 +DP                 AIN++F L D P    +E +   + ++L T +  V + GAEW
Subjt:  GDLPHFLRADITNHGWELFCSK----------------SDP--------------RPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW

Query:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT
          S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P   ++  
Subjt:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT

Query:  LIDKGIIDTSNLARLQRTQE
        L + G ID   +AR+  TQE
Subjt:  LIDKGIIDTSNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.8e-2135.35Show/hide
Query:  GDLPHFLRADITNHGWELFCSK----------------SDPRPG--------------AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW
        G LP F+   IT H W+ FC+                 +DP                 AIN++F L D P    +E +   +  +L T +  V   GAEW
Subjt:  GDLPHFLRADITNHGWELFCSK----------------SDPRPG--------------AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEW

Query:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT
          S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC  A  P   ++  
Subjt:  RFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVT

Query:  LIDKGIIDTSNLARL
        L + G ID   +AR+
Subjt:  LIDKGIIDTSNLARL

A0A2P5CPE8 Uncharacterized protein9.9e-2041.4Show/hide
Query:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV
        AIN+++ L D P    +E V A +  EL+T +  V I GAEW  S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+V
Subjt:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV

Query:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARL
        G+II  EI     +K G LFFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARL

A0A2P5DXM3 Uncharacterized protein3.2e-1841.36Show/hide
Query:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV
        AIN++F L D P    +E +   +  EL T +  V   GAEW  S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L+  SI+V
Subjt:  AINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAILHSLSIDV

Query:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARLQRTQE
        G++I SEI  C  +K G LFFP+ IT LC  A  P   ++  L + G ID   +AR+  TQE
Subjt:  GKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARLQRTQE

A0A5D2MA47 Uncharacterized protein2.1e-1736.99Show/hide
Query:  KSDPRPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAIL
        K  P   +IN LFNL D     +  M+   + + L   +  V   G++W   K    + +  YLK  AN W  F++   +P +H  T+S +R+LL++AIL
Subjt:  KSDPRPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRLLPTTHDLTVSRDRVLLVFAIL

Query:  HSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNAD
           SI+VGKII  EI++C +KK G ++FP+ IT LC +A V   A+
Subjt:  HSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGGAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTTGCAAAGAAATTTCCTATTCTAATAGTAAAAACGAGAGGAAAAA
AAGAGAGAGAAATAGAGGAGAATGTCCCTGCTACGCCTGAATCTCTAAAGAGAAAGGCGAAGAAGAAAAGAACGCCTGTAGAAAGGGAAGTCAAACGGCGAAAAAGACTT
CAAGAAACTGAGGTTTCCGAAATATTAGAGAAGGTAATAGAGGACATTGCTGAAGAAGTAATTGCTGAGGGGAAGCCAAAAGATTTTGAAAAAGAAAAAGATTCTGAGAA
GATTGATGGAACAGAGCAAGAGAATAAAGAAAAGGCAGCAACAGGTTTGCAAGGGCCAGGTACTAATATAACAGTAAAGCAAGAGATTCTGGAAGAAATAGTGAAGGATC
CGCCACGCCGCCGTCGTAAGCAGAAGGCAGGGGCTGAAACAGAAGTGGCTCGCCCAGAAGAAAGGGGGTTGCCTTATGATCGCTTTCTCAATCATTCTGCTAGGGCAAAA
TATATTGACATGTTCAAGAGAGGGTTTAGTGGTGATCTTCCGCATTTTTTGAGAGCTGACATTACAAATCATGGCTGGGAGTTATTCTGTTCCAAGTCAGATCCTCGCCC
GGGAGCAATCAATTCTCTCTTCAACCTCCAAGACTTTCCGCACGCAGGATTCAATGAGATGGTGGTGGCATCATCTAACAATGAATTGAGCACGTCTGTAAGGGAGGTTG
GTATTGAAGGGGCCGAATGGAGGTTTTCAAAGACGAAGAAGCGCACGTTCCAAGTGGCTTATCTAAAGAGTGAGGCCAACACATGGTTGGGCTTCATCAAGCTGCGCTTG
CTTCCGACAACTCATGATTTAACGGTGTCTCGAGACCGAGTGCTTCTGGTATTTGCTATTCTTCATTCTTTGAGTATCGATGTTGGAAAAATTATTTCAAGTGAAATTTA
TGATTGCTGGCAAAAGAAGGTAGGGAAACTGTTTTTCCCGAACACAATCACCCTGTTGTGTAGTAGGGCTGGGGTTCCCATGAATGCAGACGATGTCACTTTAATAGATA
AAGGAATAATAGACACGTCGAACCTGGCAAGACTTCAGAGGACGCAAGAAGCGCGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAGTTGCTAATGCAT
TCCAGTCGGATGGAAGCTAGGCTATGGCAAGTTCTTAGGATTGAGTCAAAGGTGGTGATCATTTGTCCATGTCGGAAGAATTATTTTGCTGCAGCATTGCTTGGTTTTGC
AGAATGCTCAGAATATACTGCTGAGCGACTTGGGGGAGCAAAATCTGTGATCCAGCAAAGTAGGGAGCAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGGAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTA
TTGGGAGAATTCTCCCAAAGGCTCCCACAAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTTGCAAAGAAATTTCCTATTCTAATAGTAAAAACGAGAGGAAAAA
AAGAGAGAGAAATAGAGGAGAATGTCCCTGCTACGCCTGAATCTCTAAAGAGAAAGGCGAAGAAGAAAAGAACGCCTGTAGAAAGGGAAGTCAAACGGCGAAAAAGACTT
CAAGAAACTGAGGTTTCCGAAATATTAGAGAAGGTAATAGAGGACATTGCTGAAGAAGTAATTGCTGAGGGGAAGCCAAAAGATTTTGAAAAAGAAAAAGATTCTGAGAA
GATTGATGGAACAGAGCAAGAGAATAAAGAAAAGGCAGCAACAGGTTTGCAAGGGCCAGGTACTAATATAACAGTAAAGCAAGAGATTCTGGAAGAAATAGTGAAGGATC
CGCCACGCCGCCGTCGTAAGCAGAAGGCAGGGGCTGAAACAGAAGTGGCTCGCCCAGAAGAAAGGGGGTTGCCTTATGATCGCTTTCTCAATCATTCTGCTAGGGCAAAA
TATATTGACATGTTCAAGAGAGGGTTTAGTGGTGATCTTCCGCATTTTTTGAGAGCTGACATTACAAATCATGGCTGGGAGTTATTCTGTTCCAAGTCAGATCCTCGCCC
GGGAGCAATCAATTCTCTCTTCAACCTCCAAGACTTTCCGCACGCAGGATTCAATGAGATGGTGGTGGCATCATCTAACAATGAATTGAGCACGTCTGTAAGGGAGGTTG
GTATTGAAGGGGCCGAATGGAGGTTTTCAAAGACGAAGAAGCGCACGTTCCAAGTGGCTTATCTAAAGAGTGAGGCCAACACATGGTTGGGCTTCATCAAGCTGCGCTTG
CTTCCGACAACTCATGATTTAACGGTGTCTCGAGACCGAGTGCTTCTGGTATTTGCTATTCTTCATTCTTTGAGTATCGATGTTGGAAAAATTATTTCAAGTGAAATTTA
TGATTGCTGGCAAAAGAAGGTAGGGAAACTGTTTTTCCCGAACACAATCACCCTGTTGTGTAGTAGGGCTGGGGTTCCCATGAATGCAGACGATGTCACTTTAATAGATA
AAGGAATAATAGACACGTCGAACCTGGCAAGACTTCAGAGGACGCAAGAAGCGCGCCAAGGCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAGTTGCTAATGCAT
TCCAGTCGGATGGAAGCTAGGCTATGGCAAGTTCTTAGGATTGAGTCAAAGGTGGTGATCATTTGTCCATGTCGGAAGAATTATTTTGCTGCAGCATTGCTTGGTTTTGC
AGAATGCTCAGAATATACTGCTGAGCGACTTGGGGGAGCAAAATCTGTGATCCAGCAAAGTAGGGAGCAAAACTGA
Protein sequenceShow/hide protein sequence
MGESGQFADSISLPFQGEDRMGAGNITVQDGIHSFPYWENSPKGSHKSPASRSLRVIPVAKKFPILIVKTRGKKEREIEENVPATPESLKRKAKKKRTPVEREVKRRKRL
QETEVSEILEKVIEDIAEEVIAEGKPKDFEKEKDSEKIDGTEQENKEKAATGLQGPGTNITVKQEILEEIVKDPPRRRRKQKAGAETEVARPEERGLPYDRFLNHSARAK
YIDMFKRGFSGDLPHFLRADITNHGWELFCSKSDPRPGAINSLFNLQDFPHAGFNEMVVASSNNELSTSVREVGIEGAEWRFSKTKKRTFQVAYLKSEANTWLGFIKLRL
LPTTHDLTVSRDRVLLVFAILHSLSIDVGKIISSEIYDCWQKKVGKLFFPNTITLLCSRAGVPMNADDVTLIDKGIIDTSNLARLQRTQEARQGGLVCDIHQMQEQLLMH
SSRMEARLWQVLRIESKVVIICPCRKNYFAAALLGFAECSEYTAERLGGAKSVIQQSREQN