CuGenDBv2

Gene ID	Spg027496
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Alanine-tRNA ligase
Genome location	scaffold13:20908544..20911611
RNA-Seq Expression	Spg027496
Synteny	Spg027496
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK24760.1 uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]

2.2e-28

63.24

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA+EELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

XP_008459726.1 PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]

2.2e-28

63.24

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA+EELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

XP_011656867.1 RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus]

4.9e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA++ELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

XP_011656868.1 RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus]

4.9e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA++ELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

XP_023549103.1 uncharacterized protein LOC111807564 [Cucurbita pepo subsp. pepo]

4.9e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        ++LLSKADA+VKELRQSIDRIKVESERLE                                               KRT+QAQEELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA31 Uncharacterized protein

2.4e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA++ELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

A0A1S3CAD0 uncharacterized protein LOC103498769

1.1e-28

63.24

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA+EELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

A0A5D3DNB0 Uncharacterized protein

1.1e-28

63.24

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        +SLLSKADAKVKELRQSIDRIKVESERLE                                               KRT+QA+EELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

A0A6J1H5U3 uncharacterized protein LOC111460300

2.4e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        ++LLSKADA+VKELRQSIDRIKVESERLE                                               KRT+QAQEELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

A0A6J1L5I2 uncharacterized protein LOC111499304

2.4e-28

62.5

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        ++LLSKADA+VKELRQSIDRIKVESERLE                                               KRT+QAQEELIRGRTKLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
        EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G45060.1 Uncharacterised conserved protein UCP022280

2.5e-22

46.76

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Query:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI
        ++LLS+AD KVKELRQS+DR+K ESE+LER+A+                                                A+EE IRGR KLRQAGKQI
Subjt:  KSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTSLRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQI

Query:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQVHPR
         G I SA+KIE++A GLKD+L +LPTREASRFRTQ+  R
Subjt:  EGVIQSAHKIERKARGLKDILADLPTREASRFRTQVHPR

Sequences

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CDS sequence

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ATGGGAGGCGCGAGCTGGTGGACAGTGGTGAGGTGCCAGACCCGAGCGTTCAGGTTGCAGGTAATCAACAACGCCGTCGGATGGGTAGAGGCGGCATACGAGGCAACAGT
ATGGAAGTGGCGGCAAAAAGACCACCGACGTTGGAAGGTGCACCAATTAAGAATGACGACTAGGGTTCCGACATTGGTAGCTAGGGTTTCTAAGTCCTTACTTTCCAAAG
CTGATGCTAAAGTAAAAGAGTTGCGACAGTCAATTGATCGGATAAAGGTCGAAAGCGAGAGGCTGGAGCGATTAGCAAGCCAAGGCAACTTGTATCTGGATACCACAAGT
CTACGAGCTCAGAAATACCCTTGGGTTTCGAGGAGAAAGTATCTGGAGATCACATCCCTATCATCCAATGATGAAAGGGGAGCTTGGCAATACCCTTGGAAAAGAACAGT
TCAAGCACAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGTAAACAGATCGAAGGTGTGATTCAGTCAGCTCATAAAATTGAAAGAAAGGCAAGAGGTT
TAAAAGATATTCTTGCAGATCTTCCCACGAGGGAAGCTTCACGATTTAGGACTCAGGTACATCCCCGTTGA

mRNA sequence

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Protein sequence

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MGGASWWTVVRCQTRAFRLQVINNAVGWVEAAYEATVWKWRQKDHRRWKVHQLRMTTRVPTLVARVSKSLLSKADAKVKELRQSIDRIKVESERLERLASQGNLYLDTTS
LRAQKYPWVSRRKYLEITSLSSNDERGAWQYPWKRTVQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVHPR

Spg027496 (gene) of Sponge gourd (cylindrica) v1 genome