; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027518 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027518
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationscaffold11:4274161..4282957
RNA-Seq ExpressionSpg027518
SyntenySpg027518
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]2.3e-0443.18Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGAR
        M+SKI+FLV LGAF+ +TS AR L+   +AS  D   +          P+F GGG+    G G G  GG   G   G  FG  G+G+GGG+    G G  
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGAR

Query:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
            G  GIGGG   G GA  G G GGGGG G
Subjt:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

KAF9864480.1 hypothetical protein H0E87_024073 [Populus deltoides]1.8e-0435.88Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK++ ++L  A VC+TS  +++     +  D+ +++          P FGGG     G+G G  GG+  GA +G   G  G G GGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
           G  G+GGG   GFG   GAG G GGG+G
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

KAG6787685.1 hypothetical protein POTOM_003728 [Populus tomentosa]3.0e-0435.11Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK++  +L  A VC+TS  +++     +  D+ +++          P FGGG     G+G G  GG+  GA +G   G  G G GGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
           G  G+GGG   GFG   GAG G G G G
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

KZV56398.1 glycine-rich cell wall structural protein 1-like [Dorcoceras hygrometricum]4.0e-0438.93Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK + ++LLGA VCT + AR L     A S     ++         P FGGG+    G G G  GG+  G+ YG   G +G G GGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
           G  G+GGG   GFG   G G+GGG G G
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

XP_024437755.1 glycine-rich protein 23-like [Populus trichocarpa]1.0e-0436.64Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK++ L+L  A VC+TS  +++     +  D+ +++          P FGGG     G+G G  GG+  GA +G   G  G G GGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
           G  G+GGG   GFG   GAG G GGG+G
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

TrEMBL top hitse value%identityAlignment
A0A2K2BR58 Uncharacterized protein5.0e-0536.64Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK++ L+L  A VC+TS  +++     +  D+ +++          P FGGG     G+G G  GG+  GA +G   G  G G GGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
           G  G+GGG   GFG   GAG G GGG+G
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

A0A4U5PQT8 Uncharacterized protein9.5e-0436.36Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGM-ATGAVYGPAFGNYGAGYGGGMNPSTGAGAR
        M+SK++ ++L  A VC+TS  +++     +  D+ +++          P FGGG     G+G G  GG+ A GA +G   G  G G GGG+    G G  
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGM-ATGAVYGPAFGNYGAGYGGGMNPSTGAGAR

Query:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
            G  G+GGG   GFG   GAG G GGG+G
Subjt:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

A0A5D3BB90 Glycine-rich cell wall structural protein-like1.1e-0443.18Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGAR
        M+SKI+FLV LGAF+ +TS AR L+   +AS  D   +          P+F GGG+    G G G  GG   G   G  FG  G+G+GGG+    G G  
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQF-GGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGAR

Query:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG
            G  GIGGG   G GA  G G GGGGG G
Subjt:  VPPIGTAGIGGGRPVGFGANVGAGVGGGGGSG

A0A6J1AP12 glycine-rich protein 234.3e-0440Show/hide
Query:  SSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVP
        SSK++F++ LGA VC +S AR L    S   D+ +++          P+FGGG+    G G G  GG+  GA  G  FG  GAG GGG+    G G    
Subjt:  SSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVP

Query:  PIGTAGIGGGRPVGFGANVGAGVGGGGGSG
          G  G GGG  +G G   G G GGG G G
Subjt:  PIGTAGIGGGRPVGFGANVGAGVGGGGGSG

A0A7J0HFY1 Uncharacterized protein5.6e-0436.22Show/hide
Query:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV
        M+SK + LVLLGA VCTTS  ++++ T ++  ++           +F  + GGG+    G G G   G+  G+ +G   G  G GYGGG+    G G   
Subjt:  MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARV

Query:  PPIGTAGIGGGRPVGFGANVGAGVGGG
           G  G+GGG   G+G   G G+GGG
Subjt:  PPIGTAGIGGGRPVGFGANVGAGVGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCAAGATTATCTTTCTTGTGCTTCTGGGTGCTTTTGTCTGCACCACTTCTGTGGCTCGCGTGCTGAACTGCACCATTTCTGCCTCTAGTGATGATGGGGACAT
TTACAAGCTGATGAATGCCTCTTTACAATTTGATCCCCAATTTGGTGGTGGTATGAATTTTAGTGCTGGTTATGGTTCGGGTTATGCCGGTGGTATGGCTACTGGTGCTG
TTTATGGTCCGGCTTTTGGAAATTATGGTGCGGGCTATGGTGGTGGTATGAATCCTAGTACTGGTGCTGGTGCTCGTGTTCCTCCTATTGGTACTGCTGGTATTGGTGGG
GGTCGTCCTGTTGGTTTTGGTGCGAACGTTGGCGCGGGGGTAGGTGGTGGTGGTGGTTCGGGTACATACTACAATGATGATGATGATGATGATGATGATGAGGATGAGAA
TATTGAACATGAGCGTATGGATGAACAAGTTGAAGCTCGATGTGAAAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCAAGATTATCTTTCTTGTGCTTCTGGGTGCTTTTGTCTGCACCACTTCTGTGGCTCGCGTGCTGAACTGCACCATTTCTGCCTCTAGTGATGATGGGGACAT
TTACAAGCTGATGAATGCCTCTTTACAATTTGATCCCCAATTTGGTGGTGGTATGAATTTTAGTGCTGGTTATGGTTCGGGTTATGCCGGTGGTATGGCTACTGGTGCTG
TTTATGGTCCGGCTTTTGGAAATTATGGTGCGGGCTATGGTGGTGGTATGAATCCTAGTACTGGTGCTGGTGCTCGTGTTCCTCCTATTGGTACTGCTGGTATTGGTGGG
GGTCGTCCTGTTGGTTTTGGTGCGAACGTTGGCGCGGGGGTAGGTGGTGGTGGTGGTTCGGGTACATACTACAATGATGATGATGATGATGATGATGATGAGGATGAGAA
TATTGAACATGAGCGTATGGATGAACAAGTTGAAGCTCGATGTGAAAGCAATTAA
Protein sequenceShow/hide protein sequence
MSSKIIFLVLLGAFVCTTSVARVLNCTISASSDDGDIYKLMNASLQFDPQFGGGMNFSAGYGSGYAGGMATGAVYGPAFGNYGAGYGGGMNPSTGAGARVPPIGTAGIGG
GRPVGFGANVGAGVGGGGGSGTYYNDDDDDDDDEDENIEHERMDEQVEARCESN