| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6583479.1 DNA-directed RNA polymerase III subunit 1, partial [Cucurbita argyrosperma subsp. sororia] | 8.8e-158 | 85.21 | Show/hide |
Query: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + K ESWDMLQSEVAQLINSDVRGIPFTMQVSKPL+GFVQRLKGK
Subjt: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
Query: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
QGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSL+ISGRKRLADELKYGEI
Subjt: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
Query: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Subjt: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Query: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
Subjt: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| XP_004148776.1 DNA-directed RNA polymerase III subunit 1 isoform X1 [Cucumis sativus] | 6.8e-158 | 81.82 | Show/hide |
Query: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
SN ++ ++ ++ P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + +K ESWDMLQSEVAQLINSDVRGIPF+MQV
Subjt: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
Query: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
SKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVT HNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Subjt: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Query: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Subjt: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Query: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAL+K
Subjt: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| XP_008465290.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1 [Cucumis melo] | 2.3e-158 | 82.1 | Show/hide |
Query: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
S+ ++ ++ ++ P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + +K ESWDMLQSEVAQLINSDVRGIPFTMQV
Subjt: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
Query: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
SKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Subjt: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Query: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Subjt: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Query: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDL+DLPTPALIK
Subjt: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| XP_023519826.1 DNA-directed RNA polymerase III subunit 1 [Cucurbita pepo subsp. pepo] | 8.8e-158 | 85.21 | Show/hide |
Query: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + K ESWDMLQSEVAQLINSDVRGIPFTMQVSKPL+GFVQRLKGK
Subjt: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
Query: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
QGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSL+ISGRKRLADELKYGEI
Subjt: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
Query: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Subjt: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Query: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
Subjt: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| XP_031736287.1 DNA-directed RNA polymerase III subunit 1 isoform X2 [Cucumis sativus] | 6.8e-158 | 81.82 | Show/hide |
Query: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
SN ++ ++ ++ P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + +K ESWDMLQSEVAQLINSDVRGIPF+MQV
Subjt: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
Query: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
SKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVT HNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Subjt: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Query: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Subjt: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Query: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAL+K
Subjt: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LV87 DNA-directed RNA polymerase subunit | 3.3e-158 | 81.82 | Show/hide |
Query: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
SN ++ ++ ++ P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + +K ESWDMLQSEVAQLINSDVRGIPF+MQV
Subjt: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
Query: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
SKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVT HNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Subjt: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Query: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Subjt: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Query: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAL+K
Subjt: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| A0A1S3CNX9 DNA-directed RNA polymerase subunit | 1.1e-158 | 82.1 | Show/hide |
Query: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
S+ ++ ++ ++ P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + +K ESWDMLQSEVAQLINSDVRGIPFTMQV
Subjt: SNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQV
Query: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
SKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Subjt: SKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMIS
Query: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Subjt: GRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNG
Query: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDL+DLPTPALIK
Subjt: EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| A0A5D3DCE3 DNA-directed RNA polymerase subunit | 3.6e-157 | 98.57 | Show/hide |
Query: FESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
+ESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERVTSHNIEKLRQ
Subjt: FESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
Query: CVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
CVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
Subjt: CVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
Query: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDL+DLPTPALIK
Subjt: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| A0A6J1HLT9 DNA-directed RNA polymerase subunit | 4.3e-158 | 85.21 | Show/hide |
Query: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + K ESWDMLQSEVAQLINSDVRGIPFTMQVSKPL+GFVQRLKGK
Subjt: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
Query: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
QGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSL+ISGRKRLADELKYGEI
Subjt: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
Query: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Subjt: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Query: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
Subjt: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| A0A6J1I0L0 DNA-directed RNA polymerase subunit | 9.5e-158 | 84.91 | Show/hide |
Query: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
P + RP ++ ++G ++ ++I ER +R+ + A S + S+ + K ESWDMLQSEVAQLINSDVRGIPFTMQVSKPL+GFVQRLKGK
Subjt: PSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGK
Query: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
QGRFRGNLCGKRVE+TGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSL+ISGRKRLADELKYGEI
Subjt: QGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEI
Query: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Subjt: VERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS
Query: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
FLITRKDTFYDR+AFSLMCSYMGDGMDLVDLPTPALIK
Subjt: FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| SwissProt top hits | e value | %identity | Alignment |
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| F4JXF9 DNA-directed RNA polymerase III subunit 1 | 3.4e-128 | 66.67 | Show/hide |
Query: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
++ ++ P S RP ++ I G+++ +++ Q + + + H + S + K+ + WD +Q EVA+ INS+VRG PL+G
Subjt: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
Query: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
+QRLKGK GRFR NL GKRVE+TGRTVISPDPNLKITEV +PILMA+ILT+PE V+ HNIEKLRQCV NGP+KYPGAR +R+ DGS R+L+ RKR+AD
Subjt: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
Query: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
EL G IV+RHL++GDVVLFNRQPSLHRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAI LMGVQNNLCTPKNGEILVAST
Subjt: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
Query: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
QDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTP ++K
Subjt: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| O94666 DNA-directed RNA polymerase III subunit rpc1 | 3.3e-99 | 60 | Show/hide |
Query: LSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIE
+S E W+ +Q +A INS++ G+ + SKP+ GF QRLKGKQGRFRGNL GKRV+++GRTVISPDPNL+I +VAVP +A+ILT+PERVT+ N +
Subjt: LSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIE
Query: KLRQCVSNGPDKYPGAR-MLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDG
L+ C+ NGPD +PGA ++ G R L R R+AD+LK G+IVERHL D DVVLFNRQPSLH++SIM H V+V PWRTLRFNE VC PYNADFDG
Subjt: KLRQCVSNGPDKYPGAR-MLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDG
Query: DEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
DEMN+HVPQTEEA+TEA+ LMG++NNL +P+NGE ++A+TQDF+T+++L++ KDTF DR + S +C YM D +DLP PA+IK
Subjt: DEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| P04051 DNA-directed RNA polymerase III subunit RPC1 | 1.4e-94 | 58.22 | Show/hide |
Query: TLSKSFESWDMLQSEVAQLINSD------VRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPER
+++ E WD LQ VA INSD + G KP+ GF QRLKGKQGRFRGNL GKRV+++GRTVISPDPNL I EVAVP +A++LTYPE+
Subjt: TLSKSFESWDMLQSEVAQLINSD------VRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPER
Query: VTSHNIEKLRQCVSNGPDKYPGAR-MLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNP
VT +N KL++ + NGP+ +PGA +L+ + + R+L R +LA L+ G++VERHLEDGDVVLFNRQPSLHR+SI+ H ++ PWRT R NE VC P
Subjt: VTSHNIEKLRQCVSNGPDKYPGAR-MLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNP
Query: YNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
YNADFDGDEMN+HVPQTEEAR EAI LMGV+NNL TPK+GE ++A+TQDF+T S+LI+ KD+FYDRA + + S M DG++ D+P PA++K
Subjt: YNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| Q5ZL98 DNA-directed RNA polymerase III subunit RPC1 | 8.8e-92 | 59.72 | Show/hide |
Query: ESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQC
E WD LQ + A INS++ GIP M K GFVQRLKGKQGRFRGNL GKRV+++GRTVISPDPNL+I EVAVPI +A+ILT+PE+V NI +R+
Subjt: ESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQC
Query: VSNGPDKYPGARMLRHLDGSM-RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
V NGPD +PGA ++ M R L R+++A ELK+G+IVERHL DGD+VLFNRQPSLH++SIM H RV P RT RFNE VC PYNADFDGDEMN+
Subjt: VSNGPDKYPGARMLRHLDGSM-RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
Query: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD---LVDLPTPALIK
H+PQTEEA+ EA++LMG + NL TP+NGE L+A+ QDFLT ++L+T KDTF+DRA + + + G D V LP PA++K
Subjt: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD---LVDLPTPALIK
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| Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 | 3.4e-104 | 44.63 | Show/hide |
Query: ALHLFFECAYSQLCWSKFFAIFNMQWVFSNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKS
AL+LF + +Y + I NM V + +L ++ P S RP + G ++ ++ ++ + ++ H + ++ A +S
Subjt: ALHLFFECAYSQLCWSKFFAIFNMQWVFSNSVKENVLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKS
Query: FESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
E WD LQ+ A INSDV G+P M+ +K + G QRLKGK GRFRGNL GKRV+++GRTVISPDPNL I EVAVP L+A +TYPERVT +NIE+L++
Subjt: FESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
Query: CVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
V NGPD++PGA + + DG + L R++ A ELK G+IVERH+ DGD++LFNRQPSLH++SIM H+ RVMPWRTLRFNE VC PYNADFDGDEMN+
Subjt: CVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNM
Query: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK---------LSSIITKGSSQ
H+PQTEEAR EA +LMGV NNL TP+NGE LVA+TQDFLT+S+LI+R+D FY+R F+LMC++ D + +DLP PA++K + ++ + S +
Subjt: HVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK---------LSSIITKGSSQ
Query: KRKLGDDTEDPFDKTSTKENLFNPRPGEIRANSNGWKC-LCSLGIIRSGNSPSFLFGFHRALSDRETTDVMTLLS
L + + +T +K P+ G + ++ C II GN S R S + MT L+
Subjt: KRKLGDDTEDPFDKTSTKENLFNPRPGEIRANSNGWKC-LCSLGIIRSGNSPSFLFGFHRALSDRETTDVMTLLS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G63020.1 nuclear RNA polymerase D1A | 1.3e-26 | 32.92 | Show/hide |
Query: LCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLED
L GKR ++T RTV+ DP+LK+ E+ +P +A+ L E + N E+L S P M H+ R + I ++L+ G+ + R L D
Subjt: LCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLED
Query: GDVVLFNRQPSLHRMSIMCHRVRVMPWRT-LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLI-TR
GD VL NR PS+H+ S++ VR++P + + N C P+ DFDGD ++ +VPQ+ +A+ E L+ + L +NG L++ QD LT+++L+
Subjt: GDVVLFNRQPSLHRMSIMCHRVRVMPWRT-LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLI-TR
Query: KDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIKLSSIITK
K+ + +RA + Y LP PA+IK S T+
Subjt: KDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIKLSSIITK
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| AT3G57660.1 nuclear RNA polymerase A1 | 1.1e-52 | 39.42 | Show/hide |
Query: LERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISP
+E Q V +K S L +AC ++ SK W LQ V L +S T+Q + +G Q L+ K+G FR + GKRV + R+VISP
Subjt: LERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISP
Query: DPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMR------------SLMISGR------KRLADELKYGEIVERHL
DP + + ++ +P A LTYPERVT N+EKLR+ + NGPD +PGA +M+ ++S R + D G+ V RH+
Subjt: DPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMR------------SLMISGR------KRLADELKYGEIVERHL
Query: EDGDVVLFNRQPSLHRMSIMCHRVRVMPW-RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLIT
DGD+VL NRQP+LH+ S+M H+VRV+ +TLR + + C+ YNADFDGDEMN+H PQ E +R EA ++ N P NGE L A QD + SS L+T
Subjt: EDGDVVLFNRQPSLHRMSIMCHRVRVMPW-RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLIT
Query: RKDTFYDRAAFS
++DTF D+ F+
Subjt: RKDTFYDRAAFS
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| AT4G35800.1 RNA polymerase II large subunit | 1.1e-60 | 45.42 | Show/hide |
Query: ESWDMLQSEVAQLINSDVRGIPFTMQVS-KPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
E +LQ +A ++++ G P Q S +P+ RLK K+GR RGNL GKRV+++ RTVI+PDP + I E+ VP +A LTYPE VT +NIE+L++
Subjt: ESWDMLQSEVAQLINSDVRGIPFTMQVS-KPLAGFVQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQ
Query: CVSNGPDKYPGARMLRHL--DGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEM
V GP PG +++ D R + +K L+ G VERHL+DGD VLFNRQPSLH+MSIM HR+R+MP+ T R N SV +PYNADFDGDEM
Subjt: CVSNGPDKYPGARMLRHL--DGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEM
Query: NMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF--SLMCSYMGDGMDLVDLPTPALIK
NMHVPQ+ E R E + LM V + +P+ ++ QD L IT++DTF ++ F +LM DG +P PA++K
Subjt: NMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAF--SLMCSYMGDGMDLVDLPTPALIK
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| AT5G60040.1 nuclear RNA polymerase C1 | 2.4e-129 | 66.67 | Show/hide |
Query: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
++ ++ P S RP ++ I G+++ +++ Q + + + H + S + K+ + WD +Q EVA+ INS+VRG PL+G
Subjt: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
Query: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
+QRLKGK GRFR NL GKRVE+TGRTVISPDPNLKITEV +PILMA+ILT+PE V+ HNIEKLRQCV NGP+KYPGAR +R+ DGS R+L+ RKR+AD
Subjt: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
Query: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
EL G IV+RHL++GDVVLFNRQPSLHRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAI LMGVQNNLCTPKNGEILVAST
Subjt: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
Query: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
QDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTP ++K
Subjt: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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| AT5G60040.2 nuclear RNA polymerase C1 | 2.4e-129 | 66.67 | Show/hide |
Query: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
++ ++ P S RP ++ I G+++ +++ Q + + + H + S + K+ + WD +Q EVA+ INS+VRG PL+G
Subjt: VLQLLIGPSFSSRPRLLWINGVKALISEIWLERNQRVFEDKAWHSLARLESACLKASSWCTLSKSFESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGF
Query: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
+QRLKGK GRFR NL GKRVE+TGRTVISPDPNLKITEV +PILMA+ILT+PE V+ HNIEKLRQCV NGP+KYPGAR +R+ DGS R+L+ RKR+AD
Subjt: VQRLKGKQGRFRGNLCGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLAD
Query: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
EL G IV+RHL++GDVVLFNRQPSLHRMSIMCHR R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAI LMGVQNNLCTPKNGEILVAST
Subjt: ELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST
Query: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
QDFLTSSFLITRKDTFYDRAAFSL+CSYMGDGMD +DLPTP ++K
Subjt: QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALIK
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