; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027547 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027547
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionYrdC-like domain-containing protein
Genome locationscaffold11:3897356..3904151
RNA-Seq ExpressionSpg027547
SyntenySpg027547
Gene Ontology termsGO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607198.1 YrdC domain-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.3e-12368.51Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKMV+ LS+IRTFATFPSS LGAP+ G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEA EAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSV VNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]6.0e-12468.23Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKMV+ LS+IRTFATFPSS LGAP+ G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEA EAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]1.9e-12569.06Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNT PAKMV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        G+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTKRG+FKIIRAGSAKEQTVATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]1.1e-12569.34Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKMV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATL+
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]5.8e-12769.34Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MN LPAKMV+SLSLIRTF TFPSSHLG+PN GLVSFL QNRGSRVSFPKTTWS EKCCMRVEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        V+RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLT+RG +KI+RAGSAKEQTVA LE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein1.9e-12367.4Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKM DSLSLIRTF TFPSS LG+ N G+VSFL +NRGSRVSF KT WS EKCCMRVEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CS+EA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        V+RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLT++G FKIIRAGSA+EQT+ATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

A0A5A7T5W1 YrdC domain-containing protein2.1e-12266.85Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKM DSLSLIRTFATFPSSHLG+ N G+VSFL +NRGSRVSF KT WS EKCCM VEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CS+EA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        V+RIYEIKGRKLTSPLAICVG VSDITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLT+RG FKIIRAGSA++QT+ATL+
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

A0A5D3DCB7 YrdC domain-containing protein2.1e-12269.58Show/hide
Query:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWQSF
        M DSLSLIRTFATFPSSHLG+ N G+VSFL +NRGSRVSF KT WS EKCCM VEN LQALRPASEAFAQEAT+AL+AGKVIAVPTDTLYGLACDA    
Subjt:  MVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWQSF

Query:  GGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVNRIYEI
          N V+ E S                 W       GV               V  S+  LG     +         W+  +      G S+EAV+RIYEI
Subjt:  GGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVNRIYEI

Query:  KGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVC
        KGRKLTSPLAICVG VSDITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVC
Subjt:  KGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVC

Query:  VNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        VNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLT+RG FKIIRAGSA++QT+ATL+
Subjt:  VNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial2.9e-12468.23Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNTLPAKMV+ LS+IRTFATFPSS LGAP+ G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEA EAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        GQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTI+DLTKRG FKIIRAGSAKEQTVATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial9.0e-12669.06Show/hide
Query:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA
        MNT PAKMV+ LSLIRTFATFPSS LGAPN G VSFLH NRGSR++FPKT WS EKC MRVENSLQALRPASEAFAQEATEAL+AGKVIAVPTDTLYGLA
Subjt:  MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLA

Query:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA
        CDA                                                                                            CSSEA
Subjt:  CDAWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEA

Query:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS
        VNRIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSANLS
Subjt:  VNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLS

Query:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
        G+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTKRG+FKIIRAGSAKEQTVATLE
Subjt:  GQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial5.4e-3542.79Show/hide
Query:  SVKEGVVEFLCNWFSSVERELVYG--CS---SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP
        +++  V E       +V  + +YG  CS   SEA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP
Subjt:  SVKEGVVEFLCNWFSSVERELVYG--CS---SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP

Query:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL
            +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST+VDL+  G F IIR G A E T A L
Subjt:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL

Query:  E
        +
Subjt:  E

Q3U5F4 YrdC domain-containing protein, mitochondrial6.6e-3339.13Show/hide
Query:  SVKEGVVEFLCNWFSSVERELVYG-----CSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP
        +++  V E       +V  + +YG      SS A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP
Subjt:  SVKEGVVEFLCNWFSSVERELVYG-----CSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP

Query:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL
            +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR G A E T + L
Subjt:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL

Query:  ESEFATI
        + ++  +
Subjt:  ESEFATI

Q499R4 YrdC domain-containing protein, mitochondrial1.7e-3340.1Show/hide
Query:  SVKEGVVEFLCNWFSSVERELVYG--CS---SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP
        +++  V E       +V  + +YG  CS   S A++ +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP
Subjt:  SVKEGVVEFLCNWFSSVERELVYG--CS---SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP

Query:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL
            +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST+VDL+  G F IIR+G A E T A L
Subjt:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL

Query:  ESEFATI
        + ++  +
Subjt:  ESEFATI

Q60369 Putative threonylcarbamoyl-AMP synthase9.6e-1633.94Show/hide
Query:  ELVYGCSSEAVN-----RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR--GESSILEKSLNPGLDSIGVRVPDADFIRL
        + +YG S+ A+N     ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPGP+T++LK+  G   I+ K      D IG+R+PD   IR 
Subjt:  ELVYGCSSEAVN-----RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR--GESSILEKSLNPGLDSIGVRVPDADFIRL

Query:  ISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKI
        +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STI+ +    I  I
Subjt:  ISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKI

Q86U90 YrdC domain-containing protein, mitochondrial3.5e-3440.1Show/hide
Query:  SVKEGVVEFLCNWFSSVERELVYGCS-----SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP
        +++  V E       +V  + +YG +     S A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP
Subjt:  SVKEGVVEFLCNWFSSVERELVYGCS-----SEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNP

Query:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL
            +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST+VDL+  G F IIR G A E T A L
Subjt:  GLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATL

Query:  ESEFATI
        + ++  +
Subjt:  ESEFATI

Arabidopsis top hitse value%identityAlignment
AT5G60590.1 DHBP synthase RibB-like alpha/beta domain8.6e-2835.32Show/hide
Query:  LPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSF-PKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACD
        L  ++ + L  I    + P    G       S  +Q+R  R     K  WS E+    V +    + PA+EA+AQEA EA+++ KVIAVPTDTLYG ACD
Subjt:  LPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSF-PKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACD

Query:  AWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVN
        A                                                                                            CS EAV+
Subjt:  AWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR
        RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain1.8e-7848.33Show/hide
Query:  LPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSF-PKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACD
        L  ++ + L  I    + P    G       S  +Q+R  R     K  WS E+    V +    + PA+EA+AQEA EA+++ KVIAVPTDTLYG ACD
Subjt:  LPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSF-PKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACD

Query:  AWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVN
        A                                                                                            CS EAV+
Subjt:  AWQSFGGNVVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVN

Query:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ
        RIYEIKGRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+RGESSILEKSLNPG+ +IGVRVPD +FIR +SR S + LALTSANLSG 
Subjt:  RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQ

Query:  PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE
         SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTIVDLTK G +KIIR GSAK+ TVA LE
Subjt:  PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIVDLTKRGIFKIIRAGSAKEQTVATLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACGCTTCCGGCAAAAATGGTCGACAGCCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCATCTAGGTGCTCCCAATTGTGGGCTAGTTTCGTTCTT
GCATCAAAATAGAGGATCAAGGGTGAGTTTTCCTAAAACGACATGGAGTTTCGAAAAATGTTGTATGCGCGTGGAGAACAGTTTGCAAGCACTTCGCCCTGCCTCCGAAG
CTTTTGCTCAAGAGGCTACCGAAGCTCTTAGAGCTGGAAAGGTTATCGCTGTTCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGGCAGTCTTTTGGGGGAAAC
GTGGTGGTAATGGAGAACAGTAGGGAGAGGTCATCTTCTTTAGTTCTGTTACTAGATACGGAGGAGGATGAGTGGAGAATCTTCAAGGAGAAACTGGGAGTACTTTTGTT
GTGGTGTTTGAACCTTCCTTCACCCTTTCAGAAGATGGTTAAGGAATCTGTTGCTTTGCTAGGGGAAGGGTGTTCAGTGAAGGAGGGCGTGGTCGAGTTTTTGTGCAATT
GGTTTAGTTCTGTGGAACGCGAGTTGGTTTATGGTTGTTCTTCTGAAGCAGTCAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTT
GGTGATGTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGACCTGTGACTGTTGTATTAAAAAGAGGCGAGTC
GAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTTATTTCCCGTAGATCAGAGACGGCATTGGCTC
TTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTCTGTGTTAATGATTTTGAAAACCTATGGCAACACTGTGCTTATGTATATGATGGTGGTGTTCTTCCTGCTGGA
CGAGCAGGTTCTACAATTGTCGACCTCACCAAGCGAGGGATATTTAAGATCATCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACGCTTGAAAGTGAGTTTGCCAC
CATTGTCGACCTTTGGCTACCGACCGCCACTGACCTCCGCCGACCGATCGCCACCGTTGACCTTCGACTACCGGTCGTCGCCGACCTTCGTCGACCAGCCGCCACCGTCG
ACCTCCAACTACCAGCCGCCTCCGACCTTCGTCGACCAGCCGCCACTGTCGACCTCCGACTACCAGCCGCCATCGTTGACCTCCGACTATCAGGAACTGCCGACCAGCTG
CCACCGTCGACCTATGACTATTGGCTGTCATTGTCGACCTCCGACTACCGGTCGTCACCATTGACCTCTGCCTACCGGCCGCTGCCGACCTCTGTCGACCAGCCGCCACC
GTTGACCTCCGACTCCGATCGTCGTCGACCTCTGTTGACGAGCCGCCATCGTCGACCCTCCGATTACCAGCCGCTGTCGACTTCCACCGACCAGTCACCACCGTCAATCT
CCGACTACCGACCGCCACCGTTGACCTCCGACTACAGGTCACCGCCGACCTCCGTGGACCGACCGCCACCATGGACCTCTAACTACAGGTTGTCGCCGACTCCGCCGACT
GACCGCTACCGTCGACCTCCGACTACTGGCCGCCACCGTCGACCTCCGAGTACTGGCCGCTGTGCCGCTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACGCTTCCGGCAAAAATGGTCGACAGCCTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCATCTAGGTGCTCCCAATTGTGGGCTAGTTTCGTTCTT
GCATCAAAATAGAGGATCAAGGGTGAGTTTTCCTAAAACGACATGGAGTTTCGAAAAATGTTGTATGCGCGTGGAGAACAGTTTGCAAGCACTTCGCCCTGCCTCCGAAG
CTTTTGCTCAAGAGGCTACCGAAGCTCTTAGAGCTGGAAAGGTTATCGCTGTTCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGGCAGTCTTTTGGGGGAAAC
GTGGTGGTAATGGAGAACAGTAGGGAGAGGTCATCTTCTTTAGTTCTGTTACTAGATACGGAGGAGGATGAGTGGAGAATCTTCAAGGAGAAACTGGGAGTACTTTTGTT
GTGGTGTTTGAACCTTCCTTCACCCTTTCAGAAGATGGTTAAGGAATCTGTTGCTTTGCTAGGGGAAGGGTGTTCAGTGAAGGAGGGCGTGGTCGAGTTTTTGTGCAATT
GGTTTAGTTCTGTGGAACGCGAGTTGGTTTATGGTTGTTCTTCTGAAGCAGTCAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTT
GGTGATGTCTCTGACATAACTCGTTTTGCTGTAACAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGACCTGTGACTGTTGTATTAAAAAGAGGCGAGTC
GAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTCCGTGTACCTGATGCTGACTTTATTCGGCTTATTTCCCGTAGATCAGAGACGGCATTGGCTC
TTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTCTGTGTTAATGATTTTGAAAACCTATGGCAACACTGTGCTTATGTATATGATGGTGGTGTTCTTCCTGCTGGA
CGAGCAGGTTCTACAATTGTCGACCTCACCAAGCGAGGGATATTTAAGATCATCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACGCTTGAAAGTGAGTTTGCCAC
CATTGTCGACCTTTGGCTACCGACCGCCACTGACCTCCGCCGACCGATCGCCACCGTTGACCTTCGACTACCGGTCGTCGCCGACCTTCGTCGACCAGCCGCCACCGTCG
ACCTCCAACTACCAGCCGCCTCCGACCTTCGTCGACCAGCCGCCACTGTCGACCTCCGACTACCAGCCGCCATCGTTGACCTCCGACTATCAGGAACTGCCGACCAGCTG
CCACCGTCGACCTATGACTATTGGCTGTCATTGTCGACCTCCGACTACCGGTCGTCACCATTGACCTCTGCCTACCGGCCGCTGCCGACCTCTGTCGACCAGCCGCCACC
GTTGACCTCCGACTCCGATCGTCGTCGACCTCTGTTGACGAGCCGCCATCGTCGACCCTCCGATTACCAGCCGCTGTCGACTTCCACCGACCAGTCACCACCGTCAATCT
CCGACTACCGACCGCCACCGTTGACCTCCGACTACAGGTCACCGCCGACCTCCGTGGACCGACCGCCACCATGGACCTCTAACTACAGGTTGTCGCCGACTCCGCCGACT
GACCGCTACCGTCGACCTCCGACTACTGGCCGCCACCGTCGACCTCCGAGTACTGGCCGCTGTGCCGCTGACTGA
Protein sequenceShow/hide protein sequence
MNTLPAKMVDSLSLIRTFATFPSSHLGAPNCGLVSFLHQNRGSRVSFPKTTWSFEKCCMRVENSLQALRPASEAFAQEATEALRAGKVIAVPTDTLYGLACDAWQSFGGN
VVVMENSRERSSSLVLLLDTEEDEWRIFKEKLGVLLLWCLNLPSPFQKMVKESVALLGEGCSVKEGVVEFLCNWFSSVERELVYGCSSEAVNRIYEIKGRKLTSPLAICV
GDVSDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAG
RAGSTIVDLTKRGIFKIIRAGSAKEQTVATLESEFATIVDLWLPTATDLRRPIATVDLRLPVVADLRRPAATVDLQLPAASDLRRPAATVDLRLPAAIVDLRLSGTADQL
PPSTYDYWLSLSTSDYRSSPLTSAYRPLPTSVDQPPPLTSDSDRRRPLLTSRHRRPSDYQPLSTSTDQSPPSISDYRPPPLTSDYRSPPTSVDRPPPWTSNYRLSPTPPT
DRYRRPPTTGRHRRPPSTGRCAAD