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Spg027552 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027552
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:4324641..4329703
RNA-Seq ExpressionSpg027552
SyntenySpg027552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.8e-2341.1Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL
        V VRGV+V WS  AIN+++ L D P  E++E     +   L  V+  V V GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+L
Subjt:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL

Query:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        L  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A  P         N G+ID
Subjt:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.6e-2441.52Show/hide
Query:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS
        TD EE   V VRGV+V WS  AIN+++ L D P  E++E     + + L  V+  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  
Subjt:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS

Query:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        TVS++R+LL  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A  P         N G+ID
Subjt:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]4.6e-2139.39Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDF--PHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRER
        V VRGV+V  S  AIN++Y L D    H+E+ E    P   +L  V+  V + GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+ER
Subjt:  VIVRGVEVDWSPGAINSLYNLQDF--PHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRER

Query:  VLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        VLL +++L   +I++G++I  EI  C  +K G LFFP+ I  +C+ A  P         N G+ID
Subjt:  VLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.1e-2241.72Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL
        V VRGV+V  S  AIN++Y L D P  E++E   A +  +L  V+  V + GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVL
Subjt:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL

Query:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        L +++L   +I+VG+II  EI     +K G LFFP+ IT +C  A  P         N G+ID
Subjt:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.4e-2240.83Show/hide
Query:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS
        TD EE   + VRGV+V WS  AIN+++ L D P  E++E     +  +L  V+  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  
Subjt:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS

Query:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVPENE------GDID
         VS++R+LL  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE      G+ID
Subjt:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVPENE------GDID

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.8e-2341.1Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL
        V VRGV+V WS  AIN+++ L D P  E++E     +   L  V+  V V GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+L
Subjt:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL

Query:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        L  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A  P         N G+ID
Subjt:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

A0A2P5BCG4 Uncharacterized protein (Fragment)3.7e-2441.52Show/hide
Query:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS
        TD EE   V VRGV+V WS  AIN+++ L D P  E++E     + + L  V+  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  
Subjt:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS

Query:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        TVS++R+LL  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A  P         N G+ID
Subjt:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

A0A2P5BNT0 Uncharacterized protein (Fragment)2.2e-2139.39Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDF--PHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRER
        V VRGV+V  S  AIN++Y L D    H+E+ E    P   +L  V+  V + GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+ER
Subjt:  VIVRGVEVDWSPGAINSLYNLQDF--PHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRER

Query:  VLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        VLL +++L   +I++G++I  EI  C  +K G LFFP+ I  +C+ A  P         N G+ID
Subjt:  VLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

A0A2P5CPE8 Uncharacterized protein5.3e-2341.72Show/hide
Query:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL
        V VRGV+V  S  AIN++Y L D P  E++E   A +  +L  V+  V + GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+ERVL
Subjt:  VIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERVL

Query:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID
        L +++L   +I+VG+II  EI     +K G LFFP+ IT +C  A  P         N G+ID
Subjt:  LAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVP--------ENEGDID

A0A2P5DXM3 Uncharacterized protein7.0e-2340.83Show/hide
Query:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS
        TD EE   + VRGV+V WS  AIN+++ L D P  E++E     +  +L  V+  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  
Subjt:  TDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDS

Query:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVPENE------GDID
         VS++R+LL  ++L   +I+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE      G+ID
Subjt:  TVSRERVLLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVPENE------GDID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGCGAGACAATGAGGAAGAGGAGAAGGTAGTAGAGGATGTTGCTGCCGAGGCAGTTGAGGAAGGAAATCCTAGGGAACCAGAAGT
ACAGAACCCAGAACAGACTGACCAAATAGTGGCGGATACGGAGGAGGTTCAAGAAGAGTACAGAGAGGAAGTTCAAGAAAAACAGACCGAGGATACGCAAGAGAAACGGA
CAGAGGATTTGCAGGAGAAAGTGCCACGACGTCACCGCCGAAAGCAAAAGGCTGGCCGCATCAAGGTAGTCCGAAATGATACTCCATCACCACCGTCAATGGATTCTGAG
AAAGAGGACACTGACGAGGAAGAGGGTTTCCAAGTTATCGTTCGAGGTGTAGAAGTTGACTGGAGTCCTGGAGCCATTAACTCCCTGTACAACCTTCAGGATTTCCCCCA
CGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAATTGAGAGATGTTGTTCGGGAAGTTGGTGTTGAAGGGGCGCAGTGGAGACTTTCGAAAACAAAGAAAA
GGACATTTCAGTCAGCCTATCTTAAGAAGGAAGCAAATACATGGATGGGATTCATCAAACAAAGATTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTT
CTTCTGGCTTTCGCGATTTTAAGGTCTCTCAATATTGATGTGGGCAAGATTATTGCGAGTGAGATATCTGGATGCTGGCGGAAGAAAGTTGGGAAGTTGTTTTTCCCGAA
TACAATTACAATGCTTTGCAAGCGAGCAGGGGTTCCGGAGAATGAAGGAGATATTGATTTGATGCATCTTGATTATTTGTTGTGCTCATTTACATTTTGTGCCCGCCTGG
CCAGCCGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCACACTACGCGAGCCTGGACTACCGAGTCTACCCCGCCTCATCCAGACTTGAGATTACGTGAGCCT
GGACTACCGAGTCTACCTCACCTCATCTGGCTTGAGCATTTTCACATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATACTTGAGGCTATACATGAGATT
ATGTGAGCCTGGACCACGGGTCTACCTCACCTCATTTGGCTTGAGCATCTTCACATCATGCGAGCCTCGACTACCAAGTCTACCTCACCTCACCTGGCCTGAGCATCTTC
ACATCATGCGAGTCTGGACTGCCGAGTCTACCTCGCCTCATCCAGACTTGAGACCATGTGAGCCTGGACCACGGGTCTACCTCACCTCACCTGGCGTGAGCCCATCATGC
AAGCCTGGACTAACCAAGTCTACCTCGCCTCATCCAAATATGGGATTGCATGAGCCTAGACTGCCAAGCCTACCTGACCCCATCTGGCTCGAGCCCATGCACTTCATCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGAGAGCAAGAAAAGAGCGAGACAATGAGGAAGAGGAGAAGGTAGTAGAGGATGTTGCTGCCGAGGCAGTTGAGGAAGGAAATCCTAGGGAACCAGAAGT
ACAGAACCCAGAACAGACTGACCAAATAGTGGCGGATACGGAGGAGGTTCAAGAAGAGTACAGAGAGGAAGTTCAAGAAAAACAGACCGAGGATACGCAAGAGAAACGGA
CAGAGGATTTGCAGGAGAAAGTGCCACGACGTCACCGCCGAAAGCAAAAGGCTGGCCGCATCAAGGTAGTCCGAAATGATACTCCATCACCACCGTCAATGGATTCTGAG
AAAGAGGACACTGACGAGGAAGAGGGTTTCCAAGTTATCGTTCGAGGTGTAGAAGTTGACTGGAGTCCTGGAGCCATTAACTCCCTGTACAACCTTCAGGATTTCCCCCA
CGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAATTGAGAGATGTTGTTCGGGAAGTTGGTGTTGAAGGGGCGCAGTGGAGACTTTCGAAAACAAAGAAAA
GGACATTTCAGTCAGCCTATCTTAAGAAGGAAGCAAATACATGGATGGGATTCATCAAACAAAGATTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTT
CTTCTGGCTTTCGCGATTTTAAGGTCTCTCAATATTGATGTGGGCAAGATTATTGCGAGTGAGATATCTGGATGCTGGCGGAAGAAAGTTGGGAAGTTGTTTTTCCCGAA
TACAATTACAATGCTTTGCAAGCGAGCAGGGGTTCCGGAGAATGAAGGAGATATTGATTTGATGCATCTTGATTATTTGTTGTGCTCATTTACATTTTGTGCCCGCCTGG
CCAGCCGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCACACTACGCGAGCCTGGACTACCGAGTCTACCCCGCCTCATCCAGACTTGAGATTACGTGAGCCT
GGACTACCGAGTCTACCTCACCTCATCTGGCTTGAGCATTTTCACATCATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCATACTTGAGGCTATACATGAGATT
ATGTGAGCCTGGACCACGGGTCTACCTCACCTCATTTGGCTTGAGCATCTTCACATCATGCGAGCCTCGACTACCAAGTCTACCTCACCTCACCTGGCCTGAGCATCTTC
ACATCATGCGAGTCTGGACTGCCGAGTCTACCTCGCCTCATCCAGACTTGAGACCATGTGAGCCTGGACCACGGGTCTACCTCACCTCACCTGGCGTGAGCCCATCATGC
AAGCCTGGACTAACCAAGTCTACCTCGCCTCATCCAAATATGGGATTGCATGAGCCTAGACTGCCAAGCCTACCTGACCCCATCTGGCTCGAGCCCATGCACTTCATCTG
A
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEKVVEDVAAEAVEEGNPREPEVQNPEQTDQIVADTEEVQEEYREEVQEKQTEDTQEKRTEDLQEKVPRRHRRKQKAGRIKVVRNDTPSPPSMDSE
KEDTDEEEGFQVIVRGVEVDWSPGAINSLYNLQDFPHAEYNEMAVAPSNEQLRDVVREVGVEGAQWRLSKTKKRTFQSAYLKKEANTWMGFIKQRLLPTTHDSTVSRERV
LLAFAILRSLNIDVGKIIASEISGCWRKKVGKLFFPNTITMLCKRAGVPENEGDIDLMHLDYLLCSFTFCARLASRIQKCAQGNRLKHHTTRAWTTESTPPHPDLRLREP
GLPSLPHLIWLEHFHIMRAWTTESTSPHPYLRLYMRLCEPGPRVYLTSFGLSIFTSCEPRLPSLPHLTWPEHLHIMRVWTAESTSPHPDLRPCEPGPRVYLTSPGVSPSC
KPGLTKSTSPHPNMGLHEPRLPSLPDPIWLEPMHFI