; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027579 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027579
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold13:21306570..21307869
RNA-Seq ExpressionSpg027579
SyntenySpg027579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]7.2e-2531.49Show/hide
Query:  YERFLNHFARAKYIDMLKRDFLFESGF-------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN
        +++F +  A+A++ +  K+   FE GF        G  P ++   +T   WK F   P  VN+ VV+EFYANI++     + VRG  + ++P AI   ++
Subjt:  YERFLNHFARAKYIDMLKRDFLFESGF-------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN

Query:  LQDFP-------------------HTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEI
        LQD                       +  E  +W   +T + +     L+  A  W  F+K +L+PT++++TVS  R+LL  +I  S  IDVG+II  ++
Subjt:  LQDFP-------------------HTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEI

Query:  FGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
          C  KK   L  PN IT LC++  V E+A D +L
Subjt:  FGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.9e-2632.03Show/hide
Query:  FLNHFARAKYIDMLKRDFLFESGF------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQ--
        F++  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P PVN+ +V+EFY+NI E     V+VRG+++ ++P AIN  + LQ  
Subjt:  FLNHFARAKYIDMLKRDFLFESGF------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQ--

Query:  -----DFPHTVGIE------------GAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCW
              F   V  E            G +W   + +++T     L      W  F+K +L+PT+H++TVS +R+LL  +IL    ID+GKII      C 
Subjt:  -----DFPHTVGIE------------GAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCW

Query:  RKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +++   L  PN IT LC++  V E   D +L
Subjt:  RKKVGKLFCPNTITMLCKRAGVPESAEDVLL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.7e-2936.91Show/hide
Query:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR
        G LP I +  IT H+WK FC+ P+     +VREFYAN+ +     V VRGV V WS  AIN+++ L D                      TV + GA+W 
Subjt:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR

Query:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +S     T     L   A  W  F+K  LLPTTH  TVS++R+LL  ++L   +I+VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L
Subjt:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

Query:  LDKGIIDTPNLAQ--HQRTQEARQGGTSLRDAT
         + G ID   +A+   +   E+ Q  +S R AT
Subjt:  LDKGIIDTPNLAQ--HQRTQEARQGGTSLRDAT

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.1e-3231.44Show/hide
Query:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR
        G LP I +  IT H+WK FC+ P+     +VREFYAN+ + E   V VRGV V WS  AIN+++ L D                      TV   GA+W 
Subjt:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR

Query:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +S     T     L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   +I+VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L
Subjt:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

Query:  LDKGIID---TPNLAQHQRTQEARQGGTSL------------------------------------------------------RDATIRKAVQANFSKP
         + G ID      +AQ   T+  +Q  +S                                                       RD  ++KA+Q NF++P
Subjt:  LDKGIID---TPNLAQHQRTQEARQGGTSL------------------------------------------------------RDATIRKAVQANFSKP

Query:  YPAFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
         P FP FP ++L         E E E D  G  +
Subjt:  YPAFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.8e-2632.87Show/hide
Query:  LKRDFLFESGFSGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------F
        ++++F++++    + P  +   I  H+W+LFC+ P+     +VREFY N+   +   V +RGV V  S  AIN++++L D                    
Subjt:  LKRDFLFESGFSGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------F

Query:  PHTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKR
          TV I GA+W +S     T     L   A  W  F+K RLLPTTH  TVS+E V L +++L   +I+VG++I  EI  C  +K G LF P+ IT +C+ 
Subjt:  PHTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKR

Query:  AGVPESAEDVLLLDKG
           P    +  L + G
Subjt:  AGVPESAEDVLLLDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)8.0e-3036.91Show/hide
Query:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR
        G LP I +  IT H+WK FC+ P+     +VREFYAN+ +     V VRGV V WS  AIN+++ L D                      TV + GA+W 
Subjt:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR

Query:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +S     T     L   A  W  F+K  LLPTTH  TVS++R+LL  ++L   +I+VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L
Subjt:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

Query:  LDKGIIDTPNLAQ--HQRTQEARQGGTSLRDAT
         + G ID   +A+   +   E+ Q  +S R AT
Subjt:  LDKGIIDTPNLAQ--HQRTQEARQGGTSLRDAT

A0A2P5BCG4 Uncharacterized protein (Fragment)2.9e-3231.44Show/hide
Query:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR
        G LP I +  IT H+WK FC+ P+     +VREFYAN+ + E   V VRGV V WS  AIN+++ L D                      TV   GA+W 
Subjt:  GDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------FPHTVGIEGAQWR

Query:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +S     T     L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   +I+VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L
Subjt:  MSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

Query:  LDKGIID---TPNLAQHQRTQEARQGGTSL------------------------------------------------------RDATIRKAVQANFSKP
         + G ID      +AQ   T+  +Q  +S                                                       RD  ++KA+Q NF++P
Subjt:  LDKGIID---TPNLAQHQRTQEARQGGTSL------------------------------------------------------RDATIRKAVQANFSKP

Query:  YPAFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
         P FP FP ++L         E E E D  G  +
Subjt:  YPAFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

A0A2P5DAQ2 Uncharacterized protein1.9e-2632.87Show/hide
Query:  LKRDFLFESGFSGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------F
        ++++F++++    + P  +   I  H+W+LFC+ P+     +VREFY N+   +   V +RGV V  S  AIN++++L D                    
Subjt:  LKRDFLFESGFSGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQD-------------------F

Query:  PHTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKR
          TV I GA+W +S     T     L   A  W  F+K RLLPTTH  TVS+E V L +++L   +I+VG++I  EI  C  +K G LF P+ IT +C+ 
Subjt:  PHTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKR

Query:  AGVPESAEDVLLLDKG
           P    +  L + G
Subjt:  AGVPESAEDVLLLDKG

A0A6A2YMQ9 Uncharacterized protein3.5e-2531.49Show/hide
Query:  YERFLNHFARAKYIDMLKRDFLFESGF-------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN
        +++F +  A+A++ +  K+   FE GF        G  P ++   +T   WK F   P  VN+ VV+EFYANI++     + VRG  + ++P AI   ++
Subjt:  YERFLNHFARAKYIDMLKRDFLFESGF-------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN

Query:  LQDFP-------------------HTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEI
        LQD                       +  E  +W   +T + +     L+  A  W  F+K +L+PT++++TVS  R+LL  +I  S  IDVG+II  ++
Subjt:  LQDFP-------------------HTVGIEGAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEI

Query:  FGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL
          C  KK   L  PN IT LC++  V E+A D +L
Subjt:  FGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLL

A0A6A2ZUE4 Uncharacterized protein1.4e-2632.03Show/hide
Query:  FLNHFARAKYIDMLKRDFLFESGF------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQ--
        F++  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P PVN+ +V+EFY+NI E     V+VRG+++ ++P AIN  + LQ  
Subjt:  FLNHFARAKYIDMLKRDFLFESGF------SGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQ--

Query:  -----DFPHTVGIE------------GAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCW
              F   V  E            G +W   + +++T     L      W  F+K +L+PT+H++TVS +R+LL  +IL    ID+GKII      C 
Subjt:  -----DFPHTVGIE------------GAQWRMSKTEKRTFQAPYLKKEANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCW

Query:  RKKVGKLFCPNTITMLCKRAGVPESAEDVLL
        +++   L  PN IT LC++  V E   D +L
Subjt:  RKKVGKLFCPNTITMLCKRAGVPESAEDVLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAACAATGGAGCAGGAGATTCTGGAAGAGATAGTGAAGGATCCGCCACGCCGCCGTCGTAAGCAGAAAGCAGGGCGAGTAAAAAGGATTCGGACCAACACTCC
ATCTCCTCCTTCAACTGACTCGGAGAAAGAAGAATCTGGGAATCAAGAAGAAATTAGGAAGAAGATTGTAGAAGATGAAACCAAGATGAAAAATGGTAAGGACAAGGGCA
AAGGTATTGCTATGGCCGAGGTTGAAACAGAAGTGGCTCACCCAGAAGAAAGGGGGTTTCCTTATGAGCGCTTTCTCAATCATTTTGCTAGGGCAAAATATATTGACATG
TTGAAAAGGGATTTCCTGTTCGAGAGTGGGTTTAGTGGTGATCTTCCCCGTATTCTGAGGGCTGGCATCACAAACCATGACTGGAAGTTATTCTGTTCCAAGCCAGATCC
TGTGAATTCACAAGTGGTGAGAGAATTCTACGCAAACATTAACGAGAACGAGGGTTTCCAAGTTATCGTTCGTGGAGTAGCGGTCGACTGGAGTCCTGGTGCCATCAATT
CGCTGTACAACCTTCAAGATTTCCCGCACACAGTTGGAATAGAAGGTGCACAATGGCGAATGTCAAAAACCGAGAAAAGGACTTTTCAGGCTCCGTATTTAAAGAAGGAA
GCCAATACTTGGATGGGATTCATCAAACAAAGGCTGCTTCCAACGACTCATGACTCCACAGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGCAATACTACGGTCCTTTAA
CATCGATGTGGGTAAAATTATTGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTTGGAAAATTGTTCTGTCCAAACACAATTACAATGCTTTGCAAGAGAGCAGGGG
TTCCAGAGAGCGCAGAAGACGTGCTCCTACTGGACAAGGGAATAATCGACACGCCTAACTTGGCACAGCATCAGCGGACACAGGAAGCACGTCAGGGGGGGACTAGTCTA
CGTGATGCTACAATAAGGAAGGCAGTTCAAGCTAATTTTTCCAAGCCCTATCCCGCCTTCCCCTTATTTCCTGATGATTTGCTGAACCCCTGGATCCCACCACCACCCGT
TGAGAGAGAAGAGGAAGATGATGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAACAATGGAGCAGGAGATTCTGGAAGAGATAGTGAAGGATCCGCCACGCCGCCGTCGTAAGCAGAAAGCAGGGCGAGTAAAAAGGATTCGGACCAACACTCC
ATCTCCTCCTTCAACTGACTCGGAGAAAGAAGAATCTGGGAATCAAGAAGAAATTAGGAAGAAGATTGTAGAAGATGAAACCAAGATGAAAAATGGTAAGGACAAGGGCA
AAGGTATTGCTATGGCCGAGGTTGAAACAGAAGTGGCTCACCCAGAAGAAAGGGGGTTTCCTTATGAGCGCTTTCTCAATCATTTTGCTAGGGCAAAATATATTGACATG
TTGAAAAGGGATTTCCTGTTCGAGAGTGGGTTTAGTGGTGATCTTCCCCGTATTCTGAGGGCTGGCATCACAAACCATGACTGGAAGTTATTCTGTTCCAAGCCAGATCC
TGTGAATTCACAAGTGGTGAGAGAATTCTACGCAAACATTAACGAGAACGAGGGTTTCCAAGTTATCGTTCGTGGAGTAGCGGTCGACTGGAGTCCTGGTGCCATCAATT
CGCTGTACAACCTTCAAGATTTCCCGCACACAGTTGGAATAGAAGGTGCACAATGGCGAATGTCAAAAACCGAGAAAAGGACTTTTCAGGCTCCGTATTTAAAGAAGGAA
GCCAATACTTGGATGGGATTCATCAAACAAAGGCTGCTTCCAACGACTCATGACTCCACAGTCTCTCAGGAAAGAGTTCTTCTAGCTTTTGCAATACTACGGTCCTTTAA
CATCGATGTGGGTAAAATTATTGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTTGGAAAATTGTTCTGTCCAAACACAATTACAATGCTTTGCAAGAGAGCAGGGG
TTCCAGAGAGCGCAGAAGACGTGCTCCTACTGGACAAGGGAATAATCGACACGCCTAACTTGGCACAGCATCAGCGGACACAGGAAGCACGTCAGGGGGGGACTAGTCTA
CGTGATGCTACAATAAGGAAGGCAGTTCAAGCTAATTTTTCCAAGCCCTATCCCGCCTTCCCCTTATTTCCTGATGATTTGCTGAACCCCTGGATCCCACCACCACCCGT
TGAGAGAGAAGAGGAAGATGATGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MTKTMEQEILEEIVKDPPRRRRKQKAGRVKRIRTNTPSPPSTDSEKEESGNQEEIRKKIVEDETKMKNGKDKGKGIAMAEVETEVAHPEERGFPYERFLNHFARAKYIDM
LKRDFLFESGFSGDLPRILRAGITNHDWKLFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLQDFPHTVGIEGAQWRMSKTEKRTFQAPYLKKE
ANTWMGFIKQRLLPTTHDSTVSQERVLLAFAILRSFNIDVGKIIAGEIFGCWRKKVGKLFCPNTITMLCKRAGVPESAEDVLLLDKGIIDTPNLAQHQRTQEARQGGTSL
RDATIRKAVQANFSKPYPAFPLFPDDLLNPWIPPPPVEREEEDDDAGQED