; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027582 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027582
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold13:21092690..21097554
RNA-Seq ExpressionSpg027582
SyntenySpg027582
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031665.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.7e-2743.75Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT + VVV+F +E  +  S+EK   IE+ +EGW +V R K +K +   KES  +R+ +R  K+Q+ K+KKK+R+ K V EE++DF  P + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E    V CH ++V+E++ +P  S       + LS F++ DLLSLPQE K++LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]2.9e-2944.32Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT +PVVVRF +E     SQEK   IE+ +EGWT+V R K +K +  +KE R +R+ ++  K+Q+ K+KKK+R+ K + EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E    V CH ++ +E++++P  S       +DLS F++ DLLSLPQE K +LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]9.1e-1559.3Show/hide
Query:  EKPKVVK-DKKLLKEGYSLPTIRKGLRYKSQEPVRITRRGKTKVADANHITVEEVDDSKEKESVDQLTSVFRRIRPPVARALVFQR
        E+PK+    KKLL+EG+ +P  RKGL YKS EP+RITR+GK KV D+NHITV+EVD  +E E   Q TS F RI P VAR  VF+R
Subjt:  EKPKVVK-DKKLLKEGYSLPTIRKGLRYKSQEPVRITRRGKTKVADANHITVEEVDDSKEKESVDQLTSVFRRIRPPVARALVFQR

KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]3.8e-2944.44Show/hide
Query:  LIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQPITLAK
        L+QFGT +P+VV+F +E  +  S  K  SIE+ NEGW +V R   +K +  +KES  +R+ +R+ K+Q+ K+KKK+R+ K V EE++DF  P + +T+A 
Subjt:  LIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQPITLAK

Query:  YFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
         FP RFL D Q E  E +TCH ++  E++ +P+ S       ++LS F++ DLLSLPQE K++LINAL+ S
Subjt:  YFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

KAA0054153.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-2641.76Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        + +  L+QF T +PVVV+F +E     SQEK   IE+ +EGWT+V R K +K +  +K+ R +++ +R  K+Q+ K+KKK+R+ K V EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIESDDVQAS
        +TLA +FP RFL D Q E    V CH ++  E++ +P  S       + LS F++ DLLSLPQE K++LINAL+ S    +S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIESDDVQAS

KAA0056780.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.2e-2944.32Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT +PVVV+F +E      QEK  SIE  +EGWT+V R K +K +  +KE R +R+ +R  K+Q+ K+KKK+++ K + EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E  E V CH +D +E++ +P  S       +DL  F++ DLLSLPQE K++LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

TrEMBL top hitse value%identityAlignment
A0A5A7SRA6 Ty3-gypsy retrotransposon protein1.3e-2743.75Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT + VVV+F +E  +  S+EK   IE+ +EGW +V R K +K +   KES  +R+ +R  K+Q+ K+KKK+R+ K V EE++DF  P + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E    V CH ++V+E++ +P  S       + LS F++ DLLSLPQE K++LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

A0A5A7UDR5 Ty3-gypsy retrotransposon protein5.0e-2741.76Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        + +  L+QF T +PVVV+F +E     SQEK   IE+ +EGWT+V R K +K +  +K+ R +++ +R  K+Q+ K+KKK+R+ K V EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIESDDVQAS
        +TLA +FP RFL D Q E    V CH ++  E++ +P  S       + LS F++ DLLSLPQE K++LINAL+ S    +S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIESDDVQAS

A0A5D3BE72 Ty3-gypsy retrotransposon protein1.1e-2944.32Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT +PVVV+F +E      QEK  SIE  +EGWT+V R K +K +  +KE R +R+ +R  K+Q+ K+KKK+++ K + EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E  E V CH +D +E++ +P  S       +DL  F++ DLLSLPQE K++LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

A0A5D3BSG5 Uncharacterized protein1.4e-2944.32Show/hide
Query:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP
        +    L+QFGT +PVVVRF +E     SQEK   IE+ +EGWT+V R K +K +  +KE R +R+ ++  K+Q+ K+KKK+R+ K + EE++DF    + 
Subjt:  QDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQP

Query:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
        +TLA +FP RFL D Q E    V CH ++ +E++++P  S       +DLS F++ DLLSLPQE K +LINAL+ S
Subjt:  ITLAKYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

A0A5D3BSG5 Uncharacterized protein4.4e-1559.3Show/hide
Query:  EKPKVVK-DKKLLKEGYSLPTIRKGLRYKSQEPVRITRRGKTKVADANHITVEEVDDSKEKESVDQLTSVFRRIRPPVARALVFQR
        E+PK+    KKLL+EG+ +P  RKGL YKS EP+RITR+GK KV D+NHITV+EVD  +E E   Q TS F RI P VAR  VF+R
Subjt:  EKPKVVK-DKKLLKEGYSLPTIRKGLRYKSQEPVRITRRGKTKVADANHITVEEVDDSKEKESVDQLTSVFRRIRPPVARALVFQR

A0A5D3BSG5 Uncharacterized protein1.8e-2944.44Show/hide
Query:  LIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQPITLAK
        L+QFGT +P+VV+F +E  +  S  K  SIE+ NEGW +V R   +K +  +KES  +R+ +R+ K+Q+ K+KKK+R+ K V EE++DF  P + +T+A 
Subjt:  LIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQPITLAK

Query:  YFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES
         FP RFL D Q E  E +TCH ++  E++ +P+ S       ++LS F++ DLLSLPQE K++LINAL+ S
Subjt:  YFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGCTGCTGTCTTGCGGTGTCGAGCAGCGTCTCAATGCTGAAGCCTCGCGGAATTTTGGAGCTCTCAACCAGACTTAGAGAATTCAGAGAAATTCCCCCAAGACG
GAAGACTGAAGACTCTGAAATCTATAAGTTTCCAAGAATTGAGATCAAGGAGGATCATACTCCTCTTGTTGTTGCAAGTAGGATCTCAAAGCTGATTGAAGAATCCTCTA
AGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTTGAATCTTTCATTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGTTGAT
GTAGACCAGGATGAAAGAATGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGGTTCGATTCCAAAAAGAAGCCACAATGAATGGATCCCAAGAAAAATATGATTCCAT
CGAAGATAAGAACGAAGGTTGGACCCTTGTCGTTCGTCCAAAAAGCAAAAAGAAAAGTTACGCACGGAAAGAGTCCCGCCTGTTTCGAGATAGTAAAAGAAAGGTTAAGT
CTCAAAGGAAGAAAGAAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAAGAAAATGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAAAATACTTCCCA
AGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAGCTCCTCGGGAACGATGAC
AGGTCCAGAAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGAAGCTAAAAGCGTCCTTATTAATGCATTGATAGAGTCTGATGATGTGCAGGCAT
CCGACCTAAAAAAGGGTGAAACATCTACAAGCCTTGAGAAACCTAAGGTTGTAAAGGATAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCAACAATAAGAAAAGGGCTT
AGATATAAGTCGCAAGAGCCAGTTCGCATAACAAGAAGAGGGAAGACGAAAGTGGCAGACGCAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAG
TGTCGACCAACTAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGCTGCTGTCTTGCGGTGTCGAGCAGCGTCTCAATGCTGAAGCCTCGCGGAATTTTGGAGCTCTCAACCAGACTTAGAGAATTCAGAGAAATTCCCCCAAGACG
GAAGACTGAAGACTCTGAAATCTATAAGTTTCCAAGAATTGAGATCAAGGAGGATCATACTCCTCTTGTTGTTGCAAGTAGGATCTCAAAGCTGATTGAAGAATCCTCTA
AGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTTGAATCTTTCATTCCAACATCTAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGTTGAT
GTAGACCAGGATGAAAGAATGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGGTTCGATTCCAAAAAGAAGCCACAATGAATGGATCCCAAGAAAAATATGATTCCAT
CGAAGATAAGAACGAAGGTTGGACCCTTGTCGTTCGTCCAAAAAGCAAAAAGAAAAGTTACGCACGGAAAGAGTCCCGCCTGTTTCGAGATAGTAAAAGAAAGGTTAAGT
CTCAAAGGAAGAAAGAAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCGTGGAAGAAAATGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAAAATACTTCCCA
AGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGACGTCCCTGCTAGCTCCTCGGGAACGATGAC
AGGTCCAGAAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGAAGCTAAAAGCGTCCTTATTAATGCATTGATAGAGTCTGATGATGTGCAGGCAT
CCGACCTAAAAAAGGGTGAAACATCTACAAGCCTTGAGAAACCTAAGGTTGTAAAGGATAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCAACAATAAGAAAAGGGCTT
AGATATAAGTCGCAAGAGCCAGTTCGCATAACAAGAAGAGGGAAGACGAAAGTGGCAGACGCAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAG
TGTCGACCAACTAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATGA
Protein sequenceShow/hide protein sequence
MLGCCLAVSSSVSMLKPRGILELSTRLREFREIPPRRKTEDSEIYKFPRIEIKEDHTPLVVASRISKLIEESSKDKVAVKDNPLFESFIPTSKQPKDTLNPDVMSVMMVD
VDQDERMLIQFGTLDPVVVRFQKEATMNGSQEKYDSIEDKNEGWTLVVRPKSKKKSYARKESRLFRDSKRKVKSQRKKEKKKSRRSKPVVEENEDFFCPPQPITLAKYFP
RRFLDDSQGEALETVTCHIVDVVEDDDVPASSSGTMTGPEDLSSFSIKDLLSLPQEAKSVLINALIESDDVQASDLKKGETSTSLEKPKVVKDKKLLKEGYSLPTIRKGL
RYKSQEPVRITRRGKTKVADANHITVEEVDDSKEKESVDQLTSVFRRIRPPVARALVFQR