; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027588 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027588
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGolgi to ER traffic protein 4 homolog
Genome locationscaffold13:21395144..21404393
RNA-Seq ExpressionSpg027588
SyntenySpg027588
Gene Ontology termsGO:0045048 - protein insertion into ER membrane (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR007317 - Golgi to ER traffic protein 4
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575235.1 Golgi to ER traffic protein 4-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.2e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

KAG7013799.1 Golgi to ER traffic protein 4-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

XP_022959413.1 Golgi to ER traffic protein 4 homolog [Cucurbita moschata]7.2e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

XP_023006615.1 Golgi to ER traffic protein 4 homolog isoform X2 [Cucurbita maxima]5.5e-5495.65Show/hide
Query:  LCYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV
        +CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV
Subjt:  LCYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV

Query:  QRRNPLQGIFGDFLK
        +RRNPLQGIFGDFLK
Subjt:  QRRNPLQGIFGDFLK

XP_023514316.1 Golgi to ER traffic protein 4 homolog [Cucurbita pepo subsp. pepo]5.5e-5497.37Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDAN LIDELKK EEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

TrEMBL top hitse value%identityAlignment
A0A6J1H5V6 Golgi to ER traffic protein 4 homolog3.5e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

A0A6J1HL00 Golgi to ER traffic protein 4 homolog6.0e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDAN LIDELKK EER+ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

A0A6J1KGW8 Golgi to ER traffic protein 4 homolog1.7e-5396.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDAN LIDELKK EER ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

A0A6J1L0L9 Golgi to ER traffic protein 4 homolog isoform X22.7e-5495.65Show/hide
Query:  LCYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV
        +CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV
Subjt:  LCYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV

Query:  QRRNPLQGIFGDFLK
        +RRNPLQGIFGDFLK
Subjt:  QRRNPLQGIFGDFLK

A0A6J1L2N7 Golgi to ER traffic protein 4 homolog isoform X13.5e-5496.49Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEE  ELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREP+LNEFLDEIAEKFYGV+
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        RRNPLQGIFGDFLK
Subjt:  RRNPLQGIFGDFLK

SwissProt top hitse value%identityAlignment
A0MT11 Golgi to ER traffic protein 4 homolog1.1e-0932.48Show/hide
Query:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-
        +  E DM +A+AVL +L L N   A+ +     ++    E + P  + L+ FI +LLL +    L +F +L   Y+PS++R+P  NE+LD I + F+GV 
Subjt:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-

Query:  -QRRNPLQGIFGDFLKA
         ++ +   G+ G+ L +
Subjt:  -QRRNPLQGIFGDFLKA

A4QNE0 Golgi to ER traffic protein 4 homolog1.1e-0933.33Show/hide
Query:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-
        Y  E DM +A+AVL +L L N   A+ +     ++    E   P  + L+ FI +LLL ++   L +F +L   Y+PS++R+P  NE+LD I + F+GV 
Subjt:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-

Query:  -QRRNPLQGIFGDFLKA
         ++ +   G+ G+ L +
Subjt:  -QRRNPLQGIFGDFLKA

Q54TH4 Golgi to ER traffic protein 4 homolog2.1e-1139.64Show/hide
Query:  EDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV--QRR
        E D+ I RA+   L L  L+ A+    +L      + ++   S L+ F  +LLLTL+RDALPLFN+LR  Y+ S++R+P   +FLD+IA  FY V  Q  
Subjt:  EDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV--QRR

Query:  NPLQGIFGDFL
          L G+  + L
Subjt:  NPLQGIFGDFL

Q5ZKG8 Golgi to ER traffic protein 4 homolog1.5e-0932Show/hide
Query:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-
        Y  E DM +A+AVL +L L N   A+ +     ++    E   P  + L+ FI +LLL +    L +F +L   Y+PS++R+P  NE+LD I + F+GV 
Subjt:  YPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSE-LIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGV-

Query:  -QRRNPLQGIFGDFLKAKNEVDQQD
         ++ +   G+ G+ L +     + D
Subjt:  -QRRNPLQGIFGDFLKAKNEVDQQD

Q6GKV1 Protein GET42.5e-4171.05Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDD+AIARAVLMYLS+GN++DAN ++DE+KKQ E +  E  +S+LI+FI YLL TLQRDALPLFNMLR  YK SI+R+  LNE LDEIAE+FYGVQ
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        R+NPLQG+FGD  K
Subjt:  RRNPLQGIFGDFLK

Arabidopsis top hitse value%identityAlignment
AT5G63220.1 unknown protein1.8e-4271.05Show/hide
Query:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ
        CYPGEDD+AIARAVLMYLS+GN++DAN ++DE+KKQ E +  E  +S+LI+FI YLL TLQRDALPLFNMLR  YK SI+R+  LNE LDEIAE+FYGVQ
Subjt:  CYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYGVQ

Query:  RRNPLQGIFGDFLK
        R+NPLQG+FGD  K
Subjt:  RRNPLQGIFGDFLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGATGAGAGAGAAGATTATAGGTGTCTATGTTATCCAGGTGAAGATGATATGGCTATTGCACGGGCAGTTTTGATGTACTTATCTCTTGGTAATCTAAGGGA
TGCTAATTGCCTCATTGATGAGTTAAAGAAGCAAGAAGAACGTGAGGAACTTGAGTTTCCTGATTCAGAATTGATTGAGTTTATCATCTATCTTTTGCTAACGTTGCAGA
GAGATGCTTTGCCTCTTTTCAATATGCTGAGGGCGAATTACAAGCCAAGTATAGAGAGAGAACCTGCCCTGAACGAGTTTCTTGATGAAATTGCGGAGAAGTTCTATGGA
GTACAGCGCAGAAATCCCTTGCAAGGGATCTTCGGAGATTTCTTGAAGGCGAAGAATGAAGTTGATCAGCAGGATGCAAAGGTGAATGAGCGTTGGATCTTGGAGTGGTT
GAAGCTGAAGAGACACGACGACGAGTTTCAGACGAGGGCGGCGACAATGGTGCTGAAGCATAGCAGCGAGTTTCAGACGAGGAAGAAGAAAAAGAAATCGAGGGGGAGGG
CATTGGTTTTAGACGAGGAAGAAGAAAAAGAGATAGAGGTTGCTCACTGCTCAGTCGAGGAAGAAGAAAAGGAAATCGATCGAGGCTGCCGAAGGTTGAGCCACTGGGAA
GTGATAGGCGTTGATACTGTATTGGTCACATTGGCGGTGGAGGAAACGACAGGGATGGTGGTCATTGTTGATGTATTAGATGATGGGCTCATGAGATGGATGGCGAATAA
TGGGAGATCCAGTCAGCTTCCTGCTACTGTTGACTGGTGCAGCTTGTGTGCTTCTGTGGTTCTTTATAAAGGTGGAATTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGATGAGAGAGAAGATTATAGGTGTCTATGTTATCCAGGTGAAGATGATATGGCTATTGCACGGGCAGTTTTGATGTACTTATCTCTTGGTAATCTAAGGGA
TGCTAATTGCCTCATTGATGAGTTAAAGAAGCAAGAAGAACGTGAGGAACTTGAGTTTCCTGATTCAGAATTGATTGAGTTTATCATCTATCTTTTGCTAACGTTGCAGA
GAGATGCTTTGCCTCTTTTCAATATGCTGAGGGCGAATTACAAGCCAAGTATAGAGAGAGAACCTGCCCTGAACGAGTTTCTTGATGAAATTGCGGAGAAGTTCTATGGA
GTACAGCGCAGAAATCCCTTGCAAGGGATCTTCGGAGATTTCTTGAAGGCGAAGAATGAAGTTGATCAGCAGGATGCAAAGGTGAATGAGCGTTGGATCTTGGAGTGGTT
GAAGCTGAAGAGACACGACGACGAGTTTCAGACGAGGGCGGCGACAATGGTGCTGAAGCATAGCAGCGAGTTTCAGACGAGGAAGAAGAAAAAGAAATCGAGGGGGAGGG
CATTGGTTTTAGACGAGGAAGAAGAAAAAGAGATAGAGGTTGCTCACTGCTCAGTCGAGGAAGAAGAAAAGGAAATCGATCGAGGCTGCCGAAGGTTGAGCCACTGGGAA
GTGATAGGCGTTGATACTGTATTGGTCACATTGGCGGTGGAGGAAACGACAGGGATGGTGGTCATTGTTGATGTATTAGATGATGGGCTCATGAGATGGATGGCGAATAA
TGGGAGATCCAGTCAGCTTCCTGCTACTGTTGACTGGTGCAGCTTGTGTGCTTCTGTGGTTCTTTATAAAGGTGGAATTGGATAA
Protein sequenceShow/hide protein sequence
MERDEREDYRCLCYPGEDDMAIARAVLMYLSLGNLRDANCLIDELKKQEEREELEFPDSELIEFIIYLLLTLQRDALPLFNMLRANYKPSIEREPALNEFLDEIAEKFYG
VQRRNPLQGIFGDFLKAKNEVDQQDAKVNERWILEWLKLKRHDDEFQTRAATMVLKHSSEFQTRKKKKKSRGRALVLDEEEEKEIEVAHCSVEEEEKEIDRGCRRLSHWE
VIGVDTVLVTLAVEETTGMVVIVDVLDDGLMRWMANNGRSSQLPATVDWCSLCASVVLYKGGIG