; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027635 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027635
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold6:37574227..37576937
RNA-Seq ExpressionSpg027635
SyntenySpg027635
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]6.3e-5741.34Show/hide
Query:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR
        +LRT  GL   + VDVEEMV +FLHIVAHDVKNRV RR F+RSGETVSRHFNV L+VVLRL+ +LLK+P+S+T +C   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+PGYL ++++++KEK+    I  T  ++                                 +AEK V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS

Query:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS
        H + + LLNKPFP++ DL  VFG+DRA+GG C  PVE  +    D E D  +   +D  +P P  +   +    +D+P TPTS     GS +  K+ R S
Subjt:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS

Query:  YEAEALDIMR--QSVAMQKTQLTKIADWP
        Y  + +D  R  +S+    T L    D+P
Subjt:  YEAEALDIMR--QSVAMQKTQLTKIADWP

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-6030.31Show/hide
Query:  NELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYIRHQIRQLACFRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHI
        +EL S+++    SQRQL  ++    N+ +RI +     RH+IRQLA FR+IH SDL CR++TRMDR CFAILC LLRT +GL   E+VDVEEMVAMFLHI
Subjt:  NELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYIRHQIRQLACFRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHI

Query:  VAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR----------------------------------------------
        +AHDVKNRVI+R+F RSGET+SRHFN+ L  V+RL++ LLKKP+ +   C D R                                              
Subjt:  VAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLS
                                                   M  + + PKH WT++EEA     LVELV+ GGWR DNGTFRPGYL +L RM+  K+ 
Subjt:  ------------------------------------------LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLS

Query:  TCTIDSTSI-------------------IDCK------------AEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHG
         C I +++I                    +C             AEKEV+D W  SH + KGLLNK F HY++L++VFGKDRA+GG      +  ++N  
Subjt:  TCTIDSTSI-------------------IDCK------------AEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHG

Query:  DDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGE
           G     AD        P  +L  N+  DD+  T T++ S   + S   KR R  +  ++ DI+R ++     QL +IA+WP  Q     + R  I +
Subjt:  DDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGE

Query:  MLLSQQELLDDERVALMHILFADPKMTNMMLFVPPSLRLHFLRRLLNERR
         L +  EL   +R  LM IL  +       L VP +++  +   +L E R
Subjt:  MLLSQQELLDDERVALMHILFADPKMTNMMLFVPPSLRLHFLRRLLNERR

KAA0041291.1 retrotransposon protein [Cucumis melo var. makuwa]5.5e-5339.84Show/hide
Query:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR---------
        MDR CF ILC LLRT +GL  +E+VDVEEMVAMFLHIVAHDVKNRVI+R+F RSGET+SRHFN+ L VV+RL++ LLKKP+ +   C D R         
Subjt:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR---------

Query:  ---LMAG-----AD----------------------------------------------------------------KHPKHIWTRQEEARLVESLVEL
           L+AG     AD                                                                KH     T++EEA LVE LVEL
Subjt:  ---LMAG-----AD----------------------------------------------------------------KHPKHIWTRQEEARLVESLVEL

Query:  VHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGD
        V+ GGWR DNGTF PGYL +L R++  K+               EKEV+D WVKSH + KGLLNK F HY++L++VFGKDRA+ G        AN+   D
Subjt:  VHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGD

Query:  DEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSV
          G     AD    +  PP  +   N+ FDD+  T T++ S   + S   K+ R  +  ++ DI+R ++
Subjt:  DEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSV

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]5.7e-5837.41Show/hide
Query:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQ-DG---------
        MDR CF ILC++LRT  GL   + VDV+EMV +FLHIVAHDVKNRV RR  +RSGETVSRHFN  L+ VLRL+ +LLK+P+ +T +C  DG         
Subjt:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQ-DG---------

Query:  ------------------------------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCT--
                                             + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF+ GYL +   + +     C+  
Subjt:  ------------------------------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCT--

Query:  --IDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDD
           +    I+   EK V+D WVK H + +GLLNKPFP++ DL  VFG+DRA+GG C  PVE ++    D E D      +D  +P P  +   +    +D
Subjt:  --IDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDD

Query:  VPITPTSQPSTVGSSQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGEMLLSQQELLDDERVALMHILFADPKMTNMMLFV
        +P TPTS     GSS+  K+ R SY  + +D  R S+     ++ KIA W   +   E      +   L +   +  D+ + +   L  DP M +  L  
Subjt:  VPITPTSQPSTVGSSQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGEMLLSQQELLDDERVALMHILFADPKMTNMMLFV

Query:  P
        P
Subjt:  P

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]1.3e-5741.64Show/hide
Query:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR
        +LRT  GL   + VDVEEMV +FLHIVAHDVKNRV RR F+RSGETVSRHFNV L+VVLRL+ +LLK+P+S+T +C   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+PGYL ++++++KEK+    I  T  ++                                 +AEK V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS

Query:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS
        H + + LLNKPFP++ DL  VFG+DRA+GG C  PVE  +    D E D  +   +D  +P P  +   +    +D+P TPTS     GSS+  K+ R S
Subjt:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS

Query:  YEAEALDIMR--QSVAMQKTQLTKIADWP
        Y  + +D  R  +S+    T L    D+P
Subjt:  YEAEALDIMR--QSVAMQKTQLTKIADWP

TrEMBL top hitse value%identityAlignment
A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein3.0e-5741.34Show/hide
Query:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR
        +LRT  GL   + VDVEEMV +FLHIVAHDVKNRV RR F+RSGETVSRHFNV L+VVLRL+ +LLK+P+S+T +C   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+PGYL ++++++KEK+    I  T  ++                                 +AEK V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS

Query:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS
        H + + LLNKPFP++ DL  VFG+DRA+GG C  PVE  +    D E D  +   +D  +P P  +   +    +D+P TPTS     GS +  K+ R S
Subjt:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS

Query:  YEAEALDIMR--QSVAMQKTQLTKIADWP
        Y  + +D  R  +S+    T L    D+P
Subjt:  YEAEALDIMR--QSVAMQKTQLTKIADWP

A0A5A7SWD8 Retrotransposon protein1.0e-6030.31Show/hide
Query:  NELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYIRHQIRQLACFRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHI
        +EL S+++    SQRQL  ++    N+ +RI +     RH+IRQLA FR+IH SDL CR++TRMDR CFAILC LLRT +GL   E+VDVEEMVAMFLHI
Subjt:  NELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYIRHQIRQLACFRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHI

Query:  VAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR----------------------------------------------
        +AHDVKNRVI+R+F RSGET+SRHFN+ L  V+RL++ LLKKP+ +   C D R                                              
Subjt:  VAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLS
                                                   M  + + PKH WT++EEA     LVELV+ GGWR DNGTFRPGYL +L RM+  K+ 
Subjt:  ------------------------------------------LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLS

Query:  TCTIDSTSI-------------------IDCK------------AEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHG
         C I +++I                    +C             AEKEV+D W  SH + KGLLNK F HY++L++VFGKDRA+GG      +  ++N  
Subjt:  TCTIDSTSI-------------------IDCK------------AEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHG

Query:  DDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGE
           G     AD        P  +L  N+  DD+  T T++ S   + S   KR R  +  ++ DI+R ++     QL +IA+WP  Q     + R  I +
Subjt:  DDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGE

Query:  MLLSQQELLDDERVALMHILFADPKMTNMMLFVPPSLRLHFLRRLLNERR
         L +  EL   +R  LM IL  +       L VP +++  +   +L E R
Subjt:  MLLSQQELLDDERVALMHILFADPKMTNMMLFVPPSLRLHFLRRLLNERR

A0A5A7TI01 Retrotransposon protein2.7e-5339.84Show/hide
Query:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR---------
        MDR CF ILC LLRT +GL  +E+VDVEEMVAMFLHIVAHDVKNRVI+R+F RSGET+SRHFN+ L VV+RL++ LLKKP+ +   C D R         
Subjt:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR---------

Query:  ---LMAG-----AD----------------------------------------------------------------KHPKHIWTRQEEARLVESLVEL
           L+AG     AD                                                                KH     T++EEA LVE LVEL
Subjt:  ---LMAG-----AD----------------------------------------------------------------KHPKHIWTRQEEARLVESLVEL

Query:  VHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGD
        V+ GGWR DNGTF PGYL +L R++  K+               EKEV+D WVKSH + KGLLNK F HY++L++VFGKDRA+ G        AN+   D
Subjt:  VHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGD

Query:  DEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSV
          G     AD    +  PP  +   N+ FDD+  T T++ S   + S   K+ R  +  ++ DI+R ++
Subjt:  DEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGS-SQSRKRSRASYEAEALDIMRQSV

A0A5D3C7T4 Uncharacterized protein2.7e-5837.41Show/hide
Query:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQ-DG---------
        MDR CF ILC++LRT  GL   + VDV+EMV +FLHIVAHDVKNRV RR  +RSGETVSRHFN  L+ VLRL+ +LLK+P+ +T +C  DG         
Subjt:  MDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQ-DG---------

Query:  ------------------------------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCT--
                                             + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF+ GYL +   + +     C+  
Subjt:  ------------------------------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCT--

Query:  --IDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDD
           +    I+   EK V+D WVK H + +GLLNKPFP++ DL  VFG+DRA+GG C  PVE ++    D E D      +D  +P P  +   +    +D
Subjt:  --IDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDD

Query:  VPITPTSQPSTVGSSQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGEMLLSQQELLDDERVALMHILFADPKMTNMMLFV
        +P TPTS     GSS+  K+ R SY  + +D  R S+     ++ KIA W   +   E      +   L +   +  D+ + +   L  DP M +  L  
Subjt:  VPITPTSQPSTVGSSQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGEMLLSQQELLDDERVALMHILFADPKMTNMMLFV

Query:  P
        P
Subjt:  P

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein6.1e-5841.64Show/hide
Query:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR
        +LRT  GL   + VDVEEMV +FLHIVAHDVKNRV RR F+RSGETVSRHFNV L+VVLRL+ +LLK+P+S+T +C   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGR-----LMAGADKHPKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+PGYL ++++++KEK+    I  T  ++                                 +AEK V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTCTIDSTSIID--------------------------------CKAEKEVYDAWVKS

Query:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS
        H + + LLNKPFP++ DL  VFG+DRA+GG C  PVE  +    D E D  +   +D  +P P  +   +    +D+P TPTS     GSS+  K+ R S
Subjt:  HSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPSTVGSSQSRKRSRAS

Query:  YEAEALDIMR--QSVAMQKTQLTKIADWP
        Y  + +D  R  +S+    T L    D+P
Subjt:  YEAEALDIMR--QSVAMQKTQLTKIADWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.2e-1036.36Show/hide
Query:  FRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRL
        +++++  +  C EN RMD+  F  LC LL+T   L     + +E  +A+FL I+ H+++ R ++  F  SGET+SRHFN  L+ V+ +
Subjt:  FRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHDVKNRVIRRQFSRSGETVSRHFNVTLSVVLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCATAACCCCAAATGAACTTGTGTCCGTACTTTCAATAATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCCTTCATGAACAATCACCGTAGGAT
AGAAAACCAAACTCCGTACATCAGACACCAGATCAGGCAGTTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAACACCAGGATGGATAGGACAT
GTTTTGCCATTCTATGTAGTTTGTTGAGAACGACTTCCGGTTTGGTAGGAATGGAAATTGTAGACGTCGAAGAGATGGTCGCGATGTTCCTACACATCGTTGCTCACGAT
GTTAAGAATCGAGTCATTAGAAGACAATTTTCACGGTCGGGTGAAACTGTTTCTCGGCACTTCAACGTGACTTTGAGTGTCGTACTACGATTATACAACGTTCTACTTAA
GAAACCAGAATCGATCACGGCTGCTTGCCAAGACGGGAGACTAATGGCAGGTGCAGATAAACACCCGAAACACATCTGGACAAGGCAGGAGGAGGCAAGGTTGGTCGAAT
CCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGCCCGGATACCTCGCCCGACTGAGGCGGATGATAAAAGAGAAATTGTCGACCTGC
ACCATAGATTCAACGTCCATAATAGACTGCAAGGCTGAGAAGGAGGTCTATGATGCATGGGTCAAGTCACACTCCAGCACAAAAGGACTGCTGAACAAGCCATTTCCTCA
CTACGAGGATCTTGCTTTTGTGTTCGGCAAAGACAGGGCAAGTGGCGGCGCGTGCAATGTTCCAGTGGAACAGGCCAACAGCAACCACGGGGACGACGAGGGTGATCAGA
ATGTCCAGGCGGACCAGGATTGTTATGTCCCCGCTCCTCCAGACATTAATCTGGCAGCAAACGTGGAGTTCGATGATGTCCCAATCACACCGACAAGTCAACCAAGCACT
GTAGGGTCCTCCCAAAGTCGGAAGCGTAGCAGAGCATCATATGAAGCGGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGAAGACACAGCTCACTAAGATCGC
TGACTGGCCGGACGCCCAAGACGCACGAGAGTTCAAGAGGCGGGACACGATCGGAGAGATGCTCCTATCGCAGCAGGAGCTATTGGACGATGAGAGAGTTGCTCTTATGC
ACATCCTATTCGCCGACCCGAAGATGACAAATATGATGTTGTTTGTGCCACCCAGCCTCAGGCTTCACTTTCTACGAAGACTACTCAACGAACGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCATAACCCCAAATGAACTTGTGTCCGTACTTTCAATAATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCCTTCATGAACAATCACCGTAGGAT
AGAAAACCAAACTCCGTACATCAGACACCAGATCAGGCAGTTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAACACCAGGATGGATAGGACAT
GTTTTGCCATTCTATGTAGTTTGTTGAGAACGACTTCCGGTTTGGTAGGAATGGAAATTGTAGACGTCGAAGAGATGGTCGCGATGTTCCTACACATCGTTGCTCACGAT
GTTAAGAATCGAGTCATTAGAAGACAATTTTCACGGTCGGGTGAAACTGTTTCTCGGCACTTCAACGTGACTTTGAGTGTCGTACTACGATTATACAACGTTCTACTTAA
GAAACCAGAATCGATCACGGCTGCTTGCCAAGACGGGAGACTAATGGCAGGTGCAGATAAACACCCGAAACACATCTGGACAAGGCAGGAGGAGGCAAGGTTGGTCGAAT
CCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGCCCGGATACCTCGCCCGACTGAGGCGGATGATAAAAGAGAAATTGTCGACCTGC
ACCATAGATTCAACGTCCATAATAGACTGCAAGGCTGAGAAGGAGGTCTATGATGCATGGGTCAAGTCACACTCCAGCACAAAAGGACTGCTGAACAAGCCATTTCCTCA
CTACGAGGATCTTGCTTTTGTGTTCGGCAAAGACAGGGCAAGTGGCGGCGCGTGCAATGTTCCAGTGGAACAGGCCAACAGCAACCACGGGGACGACGAGGGTGATCAGA
ATGTCCAGGCGGACCAGGATTGTTATGTCCCCGCTCCTCCAGACATTAATCTGGCAGCAAACGTGGAGTTCGATGATGTCCCAATCACACCGACAAGTCAACCAAGCACT
GTAGGGTCCTCCCAAAGTCGGAAGCGTAGCAGAGCATCATATGAAGCGGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGAAGACACAGCTCACTAAGATCGC
TGACTGGCCGGACGCCCAAGACGCACGAGAGTTCAAGAGGCGGGACACGATCGGAGAGATGCTCCTATCGCAGCAGGAGCTATTGGACGATGAGAGAGTTGCTCTTATGC
ACATCCTATTCGCCGACCCGAAGATGACAAATATGATGTTGTTTGTGCCACCCAGCCTCAGGCTTCACTTTCTACGAAGACTACTCAACGAACGCCGGTGA
Protein sequenceShow/hide protein sequence
MDSITPNELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYIRHQIRQLACFRLIHESDLCCRENTRMDRTCFAILCSLLRTTSGLVGMEIVDVEEMVAMFLHIVAHD
VKNRVIRRQFSRSGETVSRHFNVTLSVVLRLYNVLLKKPESITAACQDGRLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLRRMIKEKLSTC
TIDSTSIIDCKAEKEVYDAWVKSHSSTKGLLNKPFPHYEDLAFVFGKDRASGGACNVPVEQANSNHGDDEGDQNVQADQDCYVPAPPDINLAANVEFDDVPITPTSQPST
VGSSQSRKRSRASYEAEALDIMRQSVAMQKTQLTKIADWPDAQDAREFKRRDTIGEMLLSQQELLDDERVALMHILFADPKMTNMMLFVPPSLRLHFLRRLLNERR