; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027663 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027663
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProliferating cell nuclear antigen
Genome locationscaffold6:38809714..38821889
RNA-Seq ExpressionSpg027663
SyntenySpg027663
Gene Ontology termsGO:0006275 - regulation of DNA replication (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0030337 - DNA polymerase processivity factor activity (molecular function)
InterPro domainsIPR022648 - Proliferating cell nuclear antigen, PCNA, N-terminal
IPR022659 - Proliferating cell nuclear antigen, PCNA, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600018.1 Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2089.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

XP_022942180.1 proliferating cell nuclear antigen-like [Cucurbita moschata]1.8e-2089.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

XP_022996079.1 proliferating cell nuclear antigen-like [Cucurbita maxima]1.8e-2089.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

XP_023549127.1 proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo]1.8e-2089.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

XP_038891866.1 proliferating cell nuclear antigen-like [Benincasa hispida]3.9e-2091.07Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDR+ISMGMNLNNMAKMLRCAGNDDIV LKA+D SDCVT MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

TrEMBL top hitse value%identityAlignment
A0A4D9ARJ4 Proliferating cell nuclear antigen2.8e-1983.05Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRNISMGMNLNNMAKML+CAGNDDI+ LKA+D SD VT MFE+P+ E
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE

A0A5A7SZJ7 Retrotransposon gag protein3.6e-1963.16Show/hide
Query:  KKEENQCSVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTNDQPKRKMDNLEVKLFDEVSSDKKLQSIVPSRMKMKFSVLINTEGSLKVLTRF
        K+EENQC +ST  R SAF+RLS+STSKK +PSTS FDRLK+TNDQ +R+M + + K F E + D K+ S VPSRMK K SV INTEGSL V  RF
Subjt:  KKEENQCSVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTNDQPKRKMDNLEVKLFDEVSSDKKLQSIVPSRMKMKFSVLINTEGSLKVLTRF

A0A5D3BBF9 Gag protease polyprotein1.6e-1964.21Show/hide
Query:  KKEENQCSVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTNDQPKRKMDNLEVKLFDEVSSDKKLQSIVPSRMKMKFSVLINTEGSLKVLTRF
        K+EENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+TNDQ +R+M +L+ K F E + D K+ S VPSRMK K SV INTEGSL V  RF
Subjt:  KKEENQCSVSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTNDQPKRKMDNLEVKLFDEVSSDKKLQSIVPSRMKMKFSVLINTEGSLKVLTRF

A0A6J1FVS4 Proliferating cell nuclear antigen8.6e-2189.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

A0A6J1K7Q7 Proliferating cell nuclear antigen8.6e-2189.29Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDIV LKA+D SDC+T MFENP
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

SwissProt top hitse value%identityAlignment
O82134 Proliferating cell nuclear antigen6.3e-2177.97Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRN+SMGMNLNNMAKML+CAGNDDI+ +KA+D SD VT MFE+P ++
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE

P17070 Proliferating cell nuclear antigen2.8e-2183.93Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLRSEGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDI+ +KA+D SD VT MFE+P
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

P22177 Proliferating cell nuclear antigen (Fragment)3.7e-2179.66Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRNISMGMNLNNMAKML+CAGNDDI+ +KA+D SD VT MFE+P ++
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE

P24314 Proliferating cell nuclear antigen1.4e-2079.66Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRN SMGMNLNNMAKML+CAGNDDI+ LKA+D SD VT MFE+P ++
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE

Q43266 Proliferating cell nuclear antigen6.3e-2182.14Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP
        LLR+EGFEHYRCDRN+SMGMNLNNMAKMLRCAGNDDI+ +KA+D SD VT MFE+P
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENP

Arabidopsis top hitse value%identityAlignment
AT1G07370.1 proliferating cellular nuclear antigen 11.4e-2072.88Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRN+SMGMNL NM+KML+CAGNDDI+ +KA+D  D VT MFE+P ++
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE

AT2G29570.1 proliferating cell nuclear antigen 25.0e-2174.58Show/hide
Query:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE
        LLRSEGFEHYRCDRN+SMGMNL NM+KML+CAGNDDI+ +KA+D SD VT MFE+P ++
Subjt:  LLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAGNDDIVMLKAEDSSDCVTLMFENPWKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTACTGCCCACTGTTGCTTCAATGAACTGACGTTGCAAGAAGATAAAACTTCTATCGTTGCAGGCCAAGAAACAACCTTGCAGGGGGCATATACTAATGACAA
GTTTCTTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATAACTGAGACAAGGACTATGGAAGAAAGAATGGTTGAGATGCAGGAGCAGA
TCAACACCTTGATGAAGGCGATTGAAGAAAGAGATTCTCAAATTGAGCACCTAAAGAAAGAAGAAAATCAATGTTCAGTGTCCACTTCCACTCGACCTTCAGCTTTCCAA
AGGCTAAGTGTTTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGGACAACTTGGAGGTGAA
ACTATTCGATGAAGTAAGCAGCGACAAGAAACTTCAAAGTATTGTCCCGTCACGTATGAAAATGAAGTTCTCCGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTCA
CGCGCTTCGCTGGTGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGTTTCGCTGGAGTTCTTTCTCCCCAAGTTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTC
TCTCCAAGTTCGAGGGTTCTCAAGCGTTTCGTTGCGGTTCCTTCTCTCCAAGTTCGAGGGTTCTTACGTTGTACGCTACGGCGTTGTTCCTTCTCCAAGTTTGAAGGTTC
TCCGTTGCACGCTCCTGCGTTGCTCCTTCTCCAAGTCCGAAGGTTCCCATGTTGCGCTGTTGTGTTGCTTCATTCTCCAAGTTCGAAGGTTCTAACGCGCACTGCTTCCT
TCACCAAGTTCGAAGGTTCTTACGTTGTACGCTACTGCGTTGTTCCTTCTCCAAGTTTGAAGGTTTTCCGCTGCACGCTCATGCGTTGCTCCTTCTCCACGTCTGAGGGT
TTGCACGTGTTGTTATGTTGCTTCGCTGCTGTTCCTTCTCCAAGTTCGAAGTTCGAAGGTTCTGACGTCGCGCTGCTTCGTTGTTCCTTATCCAAGTTCGAAGGTTTTGA
AGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCATGCCACGCTGTTTTGTTGTTCCTCCTCCAAGTTCGAAGGTTCTCATAATGCGCTGCTACGCTGCTTCTTTCT
CCAAGTTCGAAGGATCTTACGTTGTACGCTACTGTGTTGTTCCTTCTCCAAGTTCAAAGGTTCTCAGCTCTATGTTGCTGTGTTGCTCCTTCTCCAAGTCCGAAGTTCCT
TCTCTAAGTTGCTGCTTCGCCGCTGTTCCTTCTTCAAGTTTGAAACTTTTCTCCAAGTCTGAAGTTCCTTCTCTCCAAGTTTGGATGTTCTCATGCTGCTTCGCTGTTGT
TCCTTCTTCAAGTTTGAAACTTCTCTCCAAGTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTCATTCTCTCAAAGTTCAAAGGTTCTCACGATGCTTCACTGGAAGAGT
TCTGGAAAGAACGAAACAGACAAAACAAGGCAATTTTGGACCACTCTGATGCACAAGGAGCTGACGAGGACAACCGGACAGAGATAGGACCAGAGAACCGACCCAGAGGA
AGACCAGACCAAAGGGTCGGCCCAACATCACTCCGTCACACGTGGGTATTTTGGGAGATCCCTACTCCTACTGATGGTAGAAGGCACCCAGTCAGTGGAGCCAAGTCTCA
CCCATCAAGGCACTATTGTGCGCATAGCGCACTAACTACCATTTCACTAGTGGGGTGTCCATGGGTTTTAAGTCGGAAATTAACTTCCACAGTTAGTAAATGGCACCTAA
TCTGCGAAGCCAAGTCCCGCCCATTTAGCTCCTCATTTCAGTCTAATACATCTCAGTCCCAGTCGGCCTTAGCCCGAGGTCGAGGTCGAGCTCATTCGCCTCCATTCGGT
CCCTACTGCCTCCGGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACACCGAGCAGCATCGGAGGCGGGGTGGCAAGCATCACACCGGTGTACAGTTTCGTCTGTCTTGC
AGGCCACGTCTTCCCCCTCTCATCAAATTTACTGTTGGTGGCACGTGAAGCAATTCGATTGTTCCGCTACTGGTTTCTTGCTCCAAGTTATGGATTCCAGTCATGTCGCT
TTGGTCTCTTCCTTCTCCGCTCTGAGGGTTTTGAGCACTACCGCTGCGACCGCAACATCTCCATGGGTATGAACCTCAACAACATGGCTAAGATGCTCCGCTGTGCTGGC
AACGATGACATTGTTATGCTGAAGGCCGAAGATAGTAGCGATTGCGTCACATTAATGTTCGAAAACCCTTGGAAAGAGTGGAAAATTGAGAATGAAGTGCGAAAATCTGG
TATTAAGGTCCCTGGTCATTCTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTACTGCCCACTGTTGCTTCAATGAACTGACGTTGCAAGAAGATAAAACTTCTATCGTTGCAGGCCAAGAAACAACCTTGCAGGGGGCATATACTAATGACAA
GTTTCTTGTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTATCATGATAACTGAGACAAGGACTATGGAAGAAAGAATGGTTGAGATGCAGGAGCAGA
TCAACACCTTGATGAAGGCGATTGAAGAAAGAGATTCTCAAATTGAGCACCTAAAGAAAGAAGAAAATCAATGTTCAGTGTCCACTTCCACTCGACCTTCAGCTTTCCAA
AGGCTAAGTGTTTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGGACAACTTGGAGGTGAA
ACTATTCGATGAAGTAAGCAGCGACAAGAAACTTCAAAGTATTGTCCCGTCACGTATGAAAATGAAGTTCTCCGTTCTCATAAATACAGAAGGTTCCTTGAAGGTTCTCA
CGCGCTTCGCTGGTGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGTTTCGCTGGAGTTCTTTCTCCCCAAGTTTGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTC
TCTCCAAGTTCGAGGGTTCTCAAGCGTTTCGTTGCGGTTCCTTCTCTCCAAGTTCGAGGGTTCTTACGTTGTACGCTACGGCGTTGTTCCTTCTCCAAGTTTGAAGGTTC
TCCGTTGCACGCTCCTGCGTTGCTCCTTCTCCAAGTCCGAAGGTTCCCATGTTGCGCTGTTGTGTTGCTTCATTCTCCAAGTTCGAAGGTTCTAACGCGCACTGCTTCCT
TCACCAAGTTCGAAGGTTCTTACGTTGTACGCTACTGCGTTGTTCCTTCTCCAAGTTTGAAGGTTTTCCGCTGCACGCTCATGCGTTGCTCCTTCTCCACGTCTGAGGGT
TTGCACGTGTTGTTATGTTGCTTCGCTGCTGTTCCTTCTCCAAGTTCGAAGTTCGAAGGTTCTGACGTCGCGCTGCTTCGTTGTTCCTTATCCAAGTTCGAAGGTTTTGA
AGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCATGCCACGCTGTTTTGTTGTTCCTCCTCCAAGTTCGAAGGTTCTCATAATGCGCTGCTACGCTGCTTCTTTCT
CCAAGTTCGAAGGATCTTACGTTGTACGCTACTGTGTTGTTCCTTCTCCAAGTTCAAAGGTTCTCAGCTCTATGTTGCTGTGTTGCTCCTTCTCCAAGTCCGAAGTTCCT
TCTCTAAGTTGCTGCTTCGCCGCTGTTCCTTCTTCAAGTTTGAAACTTTTCTCCAAGTCTGAAGTTCCTTCTCTCCAAGTTTGGATGTTCTCATGCTGCTTCGCTGTTGT
TCCTTCTTCAAGTTTGAAACTTCTCTCCAAGTTCGAAGGTTCTCACGCTGCTTTGCTGCAGTTCATTCTCTCAAAGTTCAAAGGTTCTCACGATGCTTCACTGGAAGAGT
TCTGGAAAGAACGAAACAGACAAAACAAGGCAATTTTGGACCACTCTGATGCACAAGGAGCTGACGAGGACAACCGGACAGAGATAGGACCAGAGAACCGACCCAGAGGA
AGACCAGACCAAAGGGTCGGCCCAACATCACTCCGTCACACGTGGGTATTTTGGGAGATCCCTACTCCTACTGATGGTAGAAGGCACCCAGTCAGTGGAGCCAAGTCTCA
CCCATCAAGGCACTATTGTGCGCATAGCGCACTAACTACCATTTCACTAGTGGGGTGTCCATGGGTTTTAAGTCGGAAATTAACTTCCACAGTTAGTAAATGGCACCTAA
TCTGCGAAGCCAAGTCCCGCCCATTTAGCTCCTCATTTCAGTCTAATACATCTCAGTCCCAGTCGGCCTTAGCCCGAGGTCGAGGTCGAGCTCATTCGCCTCCATTCGGT
CCCTACTGCCTCCGGCCGCCCCGGTTCCGCCTGGTTCGTCCTGAAACACCGAGCAGCATCGGAGGCGGGGTGGCAAGCATCACACCGGTGTACAGTTTCGTCTGTCTTGC
AGGCCACGTCTTCCCCCTCTCATCAAATTTACTGTTGGTGGCACGTGAAGCAATTCGATTGTTCCGCTACTGGTTTCTTGCTCCAAGTTATGGATTCCAGTCATGTCGCT
TTGGTCTCTTCCTTCTCCGCTCTGAGGGTTTTGAGCACTACCGCTGCGACCGCAACATCTCCATGGGTATGAACCTCAACAACATGGCTAAGATGCTCCGCTGTGCTGGC
AACGATGACATTGTTATGCTGAAGGCCGAAGATAGTAGCGATTGCGTCACATTAATGTTCGAAAACCCTTGGAAAGAGTGGAAAATTGAGAATGAAGTGCGAAAATCTGG
TATTAAGGTCCCTGGTCATTCTGATTGA
Protein sequenceShow/hide protein sequence
MDSTAHCCFNELTLQEDKTSIVAGQETTLQGAYTNDKFLVKYNPLFEPDSDVVTIMITETRTMEERMVEMQEQINTLMKAIEERDSQIEHLKKEENQCSVSTSTRPSAFQ
RLSVSTSKKSQPSTSVFDRLKVTNDQPKRKMDNLEVKLFDEVSSDKKLQSIVPSRMKMKFSVLINTEGSLKVLTRFAGVPSLQVRRFSCVSLEFFLPKFEGSHAFRCSSF
SPSSRVLKRFVAVPSLQVRGFLRCTLRRCSFSKFEGSPLHAPALLLLQVRRFPCCAVVLLHSPSSKVLTRTASFTKFEGSYVVRYCVVPSPSLKVFRCTLMRCSFSTSEG
LHVLLCCFAAVPSPSSKFEGSDVALLRCSLSKFEGFEAALLPSPSSKVLMPRCFVVPPPSSKVLIMRCYAASFSKFEGSYVVRYCVVPSPSSKVLSSMLLCCSFSKSEVP
SLSCCFAAVPSSSLKLFSKSEVPSLQVWMFSCCFAVVPSSSLKLLSKFEGSHAALLQFILSKFKGSHDASLEEFWKERNRQNKAILDHSDAQGADEDNRTEIGPENRPRG
RPDQRVGPTSLRHTWVFWEIPTPTDGRRHPVSGAKSHPSRHYCAHSALTTISLVGCPWVLSRKLTSTVSKWHLICEAKSRPFSSSFQSNTSQSQSALARGRGRAHSPPFG
PYCLRPPRFRLVRPETPSSIGGGVASITPVYSFVCLAGHVFPLSSNLLLVAREAIRLFRYWFLAPSYGFQSCRFGLFLLRSEGFEHYRCDRNISMGMNLNNMAKMLRCAG
NDDIVMLKAEDSSDCVTLMFENPWKEWKIENEVRKSGIKVPGHSD