; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027667 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027667
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-binding protein pno1
Genome locationscaffold6:39023582..39024256
RNA-Seq ExpressionSpg027667
SyntenySpg027667
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577533.1 Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-11496.88Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STE+STSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLK RKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

KAG7015597.1 RNA-binding protein pno1 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-11597.32Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STE+STSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008449001.1 PREDICTED: RNA-binding protein pno1 [Cucumis melo]3.1e-11698.21Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STEASTSMEVET+STQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022932417.1 RNA-binding protein pno1 [Cucurbita moschata]2.0e-11597.77Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STEASTSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022965174.1 RNA-binding protein pno1-like [Cucurbita maxima]2.2e-11496.88Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M  TEASTSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAF+LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0L7D9 KH domain-containing protein3.1e-11496.88Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M S EASTSM+VET+STQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWM+IYTPIY+QMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQK ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3BLP2 RNA-binding protein pno11.5e-11698.21Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STEASTSMEVET+STQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1EWL7 RNA-binding protein pno19.6e-11697.77Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STEASTSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1HQ98 RNA-binding protein pno1-like1.1e-11496.88Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M  TEASTSMEVETVST+TK+VVSTLPPKPQFDPLKPHEMNDGR+QFRKVSVPPHRY+PLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAF+LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1KXN9 RNA-binding protein pno1-like isoform X11.8e-11497.77Show/hide
Query:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        M STEASTSMEVE VSTQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno12.6e-6560.71Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno13.3e-6567.42Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO14.8e-6460.71Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VEU3 RNA-binding protein PNO17.4e-6558.77Show/hide
Query:  VSTQTKDVVSTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFM
        + TQT++  S+ P K P F  L   ++  G  + RKV VP HRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+
Subjt:  VSTQTKDVVSTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFM

Query:  LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL
        LGF V DA+AL+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  L
Subjt:  LGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKL

Query:  RAVTARLAERF
        RAV  R AERF
Subjt:  RAVTARLAERF

Q9VR89 RNA-binding protein pno13.0e-6665.78Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein6.4e-9681.48Show/hide
Query:  STSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA
        ST MEVET +  T      LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIY+QMK+DIRMNLKARKVELKTRADTPDISNLQK A
Subjt:  STSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCA

Query:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA
        DFVHAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPA
Subjt:  DFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPA

Query:  GKVYSKLRAVTARLAE
        GKVYSKLR+V+ARL E
Subjt:  GKVYSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGACCGAAGCCTCCACTTCCATGGAAGTGGAAACAGTTTCAACTCAAACGAAAGATGTAGTTAGCACATTGCCACCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGTCGGGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTACTCACCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATATATGAGC
AGATGAAAATCGACATTCGAATGAACCTCAAGGCACGCAAAGTCGAATTGAAAACCAGAGCAGACACGCCTGACATCAGTAACTTGCAGAAGTGTGCGGATTTTGTCCAT
GCCTTCATGCTTGGTTTCGATGTGATTGATGCCATTGCACTCTTACGGGTGGACGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAAACGCTGCGAGGCGAGCA
CTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTCGCAATTGAAAACGCCACGAAGACGAGGATAGTTATTGCAGATACCAAGATTCACATAT
TAGGATCCTTTGCTAATATCAAGATTGCAAGGGATTCCCTTTGCAGCCTCATTTTAGGGTCCCCTGCAGGAAAAGTTTATTCAAAGCTAAGAGCAGTTACAGCCAGATTG
GCGGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGACCGAAGCCTCCACTTCCATGGAAGTGGAAACAGTTTCAACTCAAACGAAAGATGTAGTTAGCACATTGCCACCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGTCGGGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTACTCACCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATATATGAGC
AGATGAAAATCGACATTCGAATGAACCTCAAGGCACGCAAAGTCGAATTGAAAACCAGAGCAGACACGCCTGACATCAGTAACTTGCAGAAGTGTGCGGATTTTGTCCAT
GCCTTCATGCTTGGTTTCGATGTGATTGATGCCATTGCACTCTTACGGGTGGACGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAAACGCTGCGAGGCGAGCA
CTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTCGCAATTGAAAACGCCACGAAGACGAGGATAGTTATTGCAGATACCAAGATTCACATAT
TAGGATCCTTTGCTAATATCAAGATTGCAAGGGATTCCCTTTGCAGCCTCATTTTAGGGTCCCCTGCAGGAAAAGTTTATTCAAAGCTAAGAGCAGTTACAGCCAGATTG
GCGGAAAGGTTTTGA
Protein sequenceShow/hide protein sequence
MNSTEASTSMEVETVSTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF