; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027683 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027683
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold7:34166603..34167930
RNA-Seq ExpressionSpg027683
SyntenySpg027683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038891747.1 pescadillo homolog [Benincasa hispida]1.9e-0734.35Show/hide
Query:  IKSLKEGQKELKKGQN----EILRLLNSLVEIVTDKFPPKDI-SEKQSQGSLHKNCSPTSSLEKLEFINAAERFVDAAENAENAENIYADHIDHIDIDRM
        I+ LK GQ+++KK  N    EIL +L  + + ++DK P K+   EKQSQ SL KN +P+SSLE                                    +
Subjt:  IKSLKEGQKELKKGQN----EILRLLNSLVEIVTDKFPPKDI-SEKQSQGSLHKNCSPTSSLEKLEFINAAERFVDAAENAENAENIYADHIDHIDIDRM

Query:  VDFATVYAEKEIKDKDDEETGEEGGEGGEKEEKEKENEMDEKEKEEEGKNDKGKRSEQEGENDENEDNAEAEKRTKKINDDKKVEPKRKYRPKVNYEKQP
        +D +    E E+    D+E  ++  E  ++E+   + E +E+++EE+ K D  K++               EK  KK          +KYRPKV  E   
Subjt:  VDFATVYAEKEIKDKDDEETGEEGGEGGEKEEKEKENEMDEKEKEEEGKNDKGKRSEQEGENDENEDNAEAEKRTKKINDDKKVEPKRKYRPKVNYEKQP

Query:  DEGRPKRQPKPTKKFSPIENEQKKGKK--------KGSPSKAKRSSPRFKIDGPSFDLQISQ
        D  RPKRQ KPTKK      +QKK KK        K SPSKA R SPR+  D PSFDL+ISQ
Subjt:  DEGRPKRQPKPTKKFSPIENEQKKGKK--------KGSPSKAKRSSPRFKIDGPSFDLQISQ

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGAAGAGGAAAAGGGAACTTGAAAAAGAAGAAGAAGAAAAAAGGAGAAGAGAAGAAAAAAAAGAAGAAGAAAAAAAGAGAAGAGAAGAAGAGGAAAAAAGAGA
AGAAGAAAGAAATAAAAGAGAAAAAGAAAGAAATGAAAAAGAAAAGGGTAGGATATCAATCTTAGAAGATGATATCAAATCCTTAAAGGAAGGACAAAAGGAACTCAAAA
AAGGTCAAAACGAGATTCTGCGATTGTTAAACAGTTTGGTGGAAATTGTCACAGACAAATTTCCACCCAAAGATATTTCTGAAAAACAATCCCAGGGATCTCTACACAAA
AATTGTTCTCCAACTTCTAGCCTTGAGAAATTAGAATTCATAAATGCAGCAGAGAGATTCGTAGATGCTGCTGAAAATGCTGAAAATGCTGAAAATATCTATGCAGACCA
TATTGACCATATTGACATTGATAGAATGGTTGATTTTGCAACCGTATATGCTGAAAAAGAGATAAAAGATAAGGATGATGAAGAAACGGGAGAAGAAGGAGGAGAAGGAG
GAGAAAAAGAAGAGAAGGAAAAAGAAAATGAAATGGATGAAAAAGAAAAAGAAGAAGAAGGAAAGAATGATAAAGGAAAAAGAAGTGAACAGGAAGGGGAGAATGATGAG
AATGAAGATAATGCGGAAGCTGAAAAAAGAACAAAGAAGATAAATGATGATAAGAAGGTTGAACCAAAAAGAAAATATAGGCCTAAAGTGAATTACGAAAAGCAACCTGA
TGAAGGGCGACCAAAAAGACAGCCAAAGCCAACAAAAAAATTCTCTCCGATAGAAAATGAACAAAAAAAAGGCAAGAAAAAGGGATCTCCAAGCAAAGCAAAGAGAAGCT
CCCCGAGATTCAAGATAGATGGTCCTAGCTTTGATTTGCAGATTTCTCAAGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGAAGAGGAAAAGGGAACTTGAAAAAGAAGAAGAAGAAAAAAGGAGAAGAGAAGAAAAAAAAGAAGAAGAAAAAAAGAGAAGAGAAGAAGAGGAAAAAAGAGA
AGAAGAAAGAAATAAAAGAGAAAAAGAAAGAAATGAAAAAGAAAAGGGTAGGATATCAATCTTAGAAGATGATATCAAATCCTTAAAGGAAGGACAAAAGGAACTCAAAA
AAGGTCAAAACGAGATTCTGCGATTGTTAAACAGTTTGGTGGAAATTGTCACAGACAAATTTCCACCCAAAGATATTTCTGAAAAACAATCCCAGGGATCTCTACACAAA
AATTGTTCTCCAACTTCTAGCCTTGAGAAATTAGAATTCATAAATGCAGCAGAGAGATTCGTAGATGCTGCTGAAAATGCTGAAAATGCTGAAAATATCTATGCAGACCA
TATTGACCATATTGACATTGATAGAATGGTTGATTTTGCAACCGTATATGCTGAAAAAGAGATAAAAGATAAGGATGATGAAGAAACGGGAGAAGAAGGAGGAGAAGGAG
GAGAAAAAGAAGAGAAGGAAAAAGAAAATGAAATGGATGAAAAAGAAAAAGAAGAAGAAGGAAAGAATGATAAAGGAAAAAGAAGTGAACAGGAAGGGGAGAATGATGAG
AATGAAGATAATGCGGAAGCTGAAAAAAGAACAAAGAAGATAAATGATGATAAGAAGGTTGAACCAAAAAGAAAATATAGGCCTAAAGTGAATTACGAAAAGCAACCTGA
TGAAGGGCGACCAAAAAGACAGCCAAAGCCAACAAAAAAATTCTCTCCGATAGAAAATGAACAAAAAAAAGGCAAGAAAAAGGGATCTCCAAGCAAAGCAAAGAGAAGCT
CCCCGAGATTCAAGATAGATGGTCCTAGCTTTGATTTGCAGATTTCTCAAGAAAATTGA
Protein sequenceShow/hide protein sequence
MEKKRKRELEKEEEEKRRREEKKEEEKKRREEEEKREEERNKREKERNEKEKGRISILEDDIKSLKEGQKELKKGQNEILRLLNSLVEIVTDKFPPKDISEKQSQGSLHK
NCSPTSSLEKLEFINAAERFVDAAENAENAENIYADHIDHIDIDRMVDFATVYAEKEIKDKDDEETGEEGGEGGEKEEKEKENEMDEKEKEEEGKNDKGKRSEQEGENDE
NEDNAEAEKRTKKINDDKKVEPKRKYRPKVNYEKQPDEGRPKRQPKPTKKFSPIENEQKKGKKKGSPSKAKRSSPRFKIDGPSFDLQISQEN