CuGenDBv2

Gene ID	Spg027690
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	scaffold7:32414381..32428382
RNA-Seq Expression	Spg027690
Synteny	Spg027690
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

6.7e-153

87.5

Show/hide

Query:  FSTSDVTRPSVF----------QRLSVTTRRD-KKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDD
        FS S   RP  F          + L+   RR+ +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDD
Subjt:  FSTSDVTRPSVF----------QRLSVTTRRD-KKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDD

Query:  EYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI
        EYANAS+IDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI
Subjt:  EYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI

Query:  KDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAH
        KDKKAMGTMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA 
Subjt:  KDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAH

Query:  NEWVIRPYMKTTKKRKFLGD
        NEWVIRPYMKTTKKR+FLGD
Subjt:  NEWVIRPYMKTTKKRKFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.7e-153

87.5

Show/hide

Query:  FSTSDVTRPSVF----------QRLSVTTRRD-KKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDD
        FS S   RP  F          + L+   RR+ +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDD
Subjt:  FSTSDVTRPSVF----------QRLSVTTRRD-KKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDD

Query:  EYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI
        EYANAS+IDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI
Subjt:  EYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI

Query:  KDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAH
        KDKKAMGTMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA 
Subjt:  KDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAH

Query:  NEWVIRPYMKTTKKRKFLGD
        NEWVIRPYMKTTKKR+FLGD
Subjt:  NEWVIRPYMKTTKKRKFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

1.3e-153

94.14

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEA LR EIELEDD  AVPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        NILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GGVKSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKRKFLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

6.7e-153

93.79

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        N+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR+FLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

5.7e-152

93.45

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        N+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR+FLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

4.7e-152

93.77

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELED+  AVPRTHIDDEYANASE+DPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLG
        NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR FLG
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

4.7e-152

93.77

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELED+  AVPRTHIDDEYANASE+DPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLG
        NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR FLG
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

6.5e-154

94.14

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEA LR EIELEDD  AVPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        NILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GGVKSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKRKFLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

3.2e-153

93.79

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        N+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR+FLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

2.7e-152

93.45

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEA LR EIELEDD  AVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQFAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        N+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GG KSIELKEIGPRFEL+LYQIKLGTVDQTEA NEWVIRPYMKTTKKR+FLGD
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

1.8e-84

54.67

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRK+ E  ER   E+K K+R ALEE + IPTELR E   L+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  FAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+R +
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL
        +IL++LFPVPK D++RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

2.4e-84

54.33

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRK+ E  +R + EKK +++ ALEE + IPTELR E   L+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+R +
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL
        +IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

4.0e-84

54.33

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRK+ E  +R   E+K ++R ALEE + IPTELR E   L+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+R +
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL
        +IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

2.4e-84

54.33

Show/hide

Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRK+ E  +R + EKK +++ ALEE + IPTELR E   L+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+R +
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL
        +IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

4.0e-84

54.33

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Query:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE
        R  +  +EYLYRK+ E  +R   E+K ++R ALEE + IPTELR E   L+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  FAKE
Subjt:  RRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKE

Query:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA
        LK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+R +
Subjt:  LKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTA

Query:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL
        +IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  NILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQ-TEAHNEWVIRPYMKTTKKRKFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

1.9e-129

76.92

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Query:  EQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVF
        ++EY+YRKSLEG ER +YE+KR IREAL+EGKPIPTELRN EA LR EI+LED   AVPR+HIDDEYANA+E DPKIL+TTSR+PSAPL +F KELK VF
Subjt:  EQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVF

Query:  PNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKH
        PN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+R  NILKH
Subjt:  PNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKH

Query:  LFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD
        +FP PK D KR+VTF+NQSDYISFR+H+Y+K  GG KSIELKEIGPRFEL+LYQ+KLGTV+Q EA  EWVIRPYM T+KKRKF+G+
Subjt:  LFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

9.9e-38

34.71

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Query:  SVTTRRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEE----------GKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITT
        S+   +DK+ + Y  +K    +++L  +KK + R+A E+           K IP  + N   +       +D+ +       +       EI PK+L+TT
Subjt:  SVTTRRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEE----------GKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITT

Query:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHI
         R  S        EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G      P +
Subjt:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHI

Query:  ILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGVKSIE--LKEIGPRFELQLYQIKLGTVDQTEAHNEWV
        +LNNFTT+LG R     + LFP P P+   +RVVTF NQ D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D      EWV
Subjt:  ILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGVKSIE--LKEIGPRFELQLYQIKLGTVDQTEAHNEWV

Query:  IRPYMKTTKKRKFL
         +P M T+++R FL
Subjt:  IRPYMKTTKKRKFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGACACATCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACACACTTAACTCATCCTCGTAA
GTGTAACCCTCCCACTTTCAGATCCCAGAGGCACGCACCAACAGGCTACCGAAGGGAAAGACAACTGTTGGTAATTAGCCTAAGTGACCCTATCCTTTCCAGGAGTTCAC
GGTGTTACGAATCTTATGATCAGACCCTCCAAAGGGATGGTTGCTCCAAGACAACACGCAGGCGGATCATAAGACTCTCACGGTTTCGGGTTTGTTCCCAGGAGACTTGT
GGGAGTCTTTTGGGAGATATCTCTGAGAGAAGGAGAGACAATGGGATGCCTTCCACCCCACCCCAGGGTCCTATATATAGACCCACAGCTGCACTCTTCTCACTGCAGAA
TATTTCTGTGTCCACGGATATCGACCAATACTACAAGTCAATCCTTCACGTGTGTTCGTATCCCAACTGGGAGAAATTCCAAAGACAAGTGGCTGCAAGCAGAAGAGTTT
TAAAGTTTGAGGAAAGTTGGGTTTCCCATGAAGGCAACAAAAATGCTCTTGCTGATTCCTGGAAAGACACAGCCGAAGCTACAAACTTTAATTTCAATATGAAGTTTCAT
AAGGGGTTAGCAGCCATGAATAGATGTAATAGAGACAGATTGAAAGGGTCTATAAAAGAAGCCATTAGATCGAAGGAAAGAGAGATCAGTATTCTTTCCAACCTTACAAG
TCAGGAGGCTTTCGCAAAAATGGTCAAAGCTGAGAAGGACCTTGAAAGCTTACTGGAAGAAGAGGAAAGTTACTGGAAAATTCAGAAAACAGAGGAAAAGCTGGAAATTC
CCAGAAATGCGACTGCATTTCTGGAAAAACTGAAGTTGTTCCGAGTCATCCGTGGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAGAAATGTG
CATAACGGAATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAGGAATCCTCTAAGGATAGGGTTGCGGTCAAAGACAACCC
GCTATTTGAATCTGTCATTCCAACATCTAAGCGGTCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGACAGAGA
TGGAAAGAAAACTCAATCTCTTAATGAAGGCATTGATGATTCAATTTGGGACCCTTGATCCCATAGTGGTTCGATTCAAAAAAGAAGCCACGATGAAGGGATCCCAAGAA
AAATATGTTTCCATCGAAGATGAGAACAAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGAAAAGAGTCCCTCCTATTTCGAGACAATAA
AAGAAAGGCTAGGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTTAAAGCCTGTCATGGAGGAAAGTGAAGATTTCTTTTGTCCTCCACAACCCATAACTTTGG
CAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAGGATGATGATGTCCCTGCTAGCTCA
TCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGAAGCTAAAAGTGGTGAAGCGTCTACAAGCCTTGTGAAACC
TAAGGTTGTGAAGGATGAGAAATGTTCGAATTCACCTATCCTACGATACGTCCCCTTGTCTCAACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTCAGAAAGCATAA
AGATTAGTCTGCCAACAACAAGAAAAGGGCTTGGATATAAGTCGCCAGAGCCGATTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTA
GAGGAGGTTAATGACTCGAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCGGTTGCTCGTGTCTTAGTCTTTCAGAGATTAAGTGT
AAATGAAACGGAAGAAGAAAACACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGCTAAGTATGCCCAGTGGGGAAGAAGAGAGTACATTTTCAACTC
CGGATATCACTCGACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAGGAGAGTGCATTTTCAACTTCAGATGTGACTCGGCCATCAGTTTTTCAGAGGTTA
AGTGTTACCACGAGAAGAGACAAAAAAGAACAGGAGTATTTGTACCGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTCTATGAGAAGAAGCGGAAGATTAGAGAAGCCCT
CGAAGAGGGAAAACCTATTCCTACTGAACTCAGGAATGAGGAAGCGACACTTCGTAATGAAATTGAACTTGAGGATGATCGCATAGCAGTCCCAAGGACACACATTGATG
ATGAGTATGCAAATGCTTCAGAAATTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTTTTTCCG
AATGCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTCATTTTAGTTCATGAACATCGTGGTGTGCC
AGATGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGACATGAAATTAAGGACAAAAAAGCTATGGGAACGATGC
CTGAGGCCTACCCGCACATAATTTTGAATAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGT
GTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGTTAAATCAATTGAGCTGAAGGAGATTGGTCCTCGGTTTGA
ATTGCAACTGTATCAGATAAAGTTAGGAACTGTTGATCAAACGGAAGCACATAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTG
ATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRHISANSNSGITHIPIGISHRYLVKDLLTHLTHPRKCNPPTFRSQRHAPTGYRRERQLLVISLSDPILSRSSRCYESYDQTLQRDGCSKTTRRRIIRLSRFRVCSQETC
GSLLGDISERRRDNGMPSTPPQGPIYRPTAALFSLQNISVSTDIDQYYKSILHVCSYPNWEKFQRQVAASRRVLKFEESWVSHEGNKNALADSWKDTAEATNFNFNMKFH
KGLAAMNRCNRDRLKGSIKEAIRSKEREISILSNLTSQEAFAKMVKAEKDLESLLEEEESYWKIQKTEEKLEIPRNATAFLEKLKLFRVIRGVIGCIRELSMSESSHRNV
HNGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVIPTSKRSKDTLNPDVMSVMMADIDQDERMTEMERKLNLLMKALMIQFGTLDPIVVRFKKEATMKGSQE
KYVSIEDENKGWTLVVRRKKQKQSYARKESLLFRDNKRKARSQKKKGKKKSRRLKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPASS
SGTVAGPGDLSSFSIKDLLSLPQEAKSGEASTSLVKPKVVKDEKCSNSPILRYVPLSQRKKGESPFTECSESIKISLPTTRKGLGYKSPEPIRITRRGKAKVADTNHITV
EEVNDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEEENTQPTNSSTRPSVFRRLSMPSGEEESTFSTPDITRPSAFQRLNMPIGEEESAFSTSDVTRPSVFQRL
SVTTRRDKKEQEYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEATLRNEIELEDDRIAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVFP
NAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKR
VVTFANQSDYISFRHHIYEKHGGVKSIELKEIGPRFELQLYQIKLGTVDQTEAHNEWVIRPYMKTTKKRKFLGD

Spg027690 (gene) of Sponge gourd (cylindrica) v1 genome