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Spg027697 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027697
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:33847693..33848709
RNA-Seq ExpressionSpg027697
SyntenySpg027697
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.1e-0850Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELP+PDTLPTSAESS S+SS+ L    E   V        +  DDV WLHA+F+ +  GGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV

KAA0060199.1 uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa]6.4e-0956.52Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLHEGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT
        +  L++    VEIELPVPDTLPTSAES  S+S ST        +  DDV WLHA+F+ + AGGPGGGVT
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLHEGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT

KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa]4.9e-0953.85Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELPVPDTLPTSAESS S+SS+ L    E   V +        EDDV WLHA+F+ + AGGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV

TYK25935.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-0844.21Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH--------------------------EGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT
        +  L++    VEIELP+PDTLPTSAESS S+SS+ L                           EG    +  DDV WLHAIF+ + AGGPGGGVT
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH--------------------------EGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]4.9e-0953.85Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELPVPDTLPTSAESS S+SS+ L    E   V +        EDDV WLHA+F+ + AGGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV

TrEMBL top hitse value%identityAlignment
A0A5A7TKT0 Reverse transcriptase3.5e-0850Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELP+PDTLPTSAESS S+SS+ L    E   V        +  DDV WLHA+F+ +  GGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV

A0A5A7VMG9 Reverse transcriptase2.4e-0953.85Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELPVPDTLPTSAESS S+SS+ L    E   V +        EDDV WLHA+F+ + AGGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV

A0A5D3BAD1 Retrotrans_gag domain-containing protein3.1e-0956.52Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLHEGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT
        +  L++    VEIELPVPDTLPTSAES  S+S ST        +  DDV WLHA+F+ + AGGPGGGVT
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLHEGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT

A0A5D3D150 Reverse transcriptase3.5e-0850Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELP+PDTLPTSAESS S+SS+ L    E   V        +  DDV WLHA+F+ +  GGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVS-------LEEDDVRWLHAIFQTELAGGPGGGV

A0A5D3DX39 Reverse transcriptase2.4e-0953.85Show/hide
Query:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV
        +  L++    VEIELPVPDTLPTSAESS S+SS+ L    E   V +        EDDV WLHA+F+ + AGGPGGGV
Subjt:  VETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLH---EGQRVSL-------EEDDVRWLHAIFQTELAGGPGGGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATAGCGTCTCGACGTTGTGGCCTGTTAGCGCCTAATCAGAAAAGGAAAGACAACGTCGAGACGCTCAAGGAGCAGTGTCTCGACGTAGAGATCGAGCTCCCGGT
GCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTACATGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACG
CCATCTTCCAGACTGAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATAGCGTCTCGACGTTGTGGCCTGTTAGCGCCTAATCAGAAAAGGAAAGACAACGTCGAGACGCTCAAGGAGCAGTGTCTCGACGTAGAGATCGAGCTCCCGGT
GCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTACATGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACG
CCATCTTCCAGACTGAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAA
Protein sequenceShow/hide protein sequence
MVIASRRCGLLAPNQKRKDNVETLKEQCLDVEIELPVPDTLPTSAESSRSSSSSTLHEGQRVSLEEDDVRWLHAIFQTELAGGPGGGVT