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Spg027720 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027720
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold7:33719780..33725017
RNA-Seq ExpressionSpg027720
SyntenySpg027720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055183.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-0462.16Show/hide
Query:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
        HREI ++RLLVCPG T HSEGC +E+ T +TP +DR+
Subjt:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
TrEMBL top hitse value%identityAlignment
A0A5D3DQ34 Gag/pol protein4.6e-0462.16Show/hide
Query:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
        HREI ++RLLVCPG T HSEGC +E+ T +TP +DR+
Subjt:  HREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCCAGTCAGTTTTGGGGTCAAAACAACCAGTTAGGTGCGAAGAAGACTCGTCAACAACGACCCGCGCACGACTCGGAACGACCTCTGTTTTTTCAGAAATGCG
GTCGCATTTCAATTATGCCTTCCCAGAAATGCGGAATCATGTTTCGAAGTTAAATCGAGAAATTGGAGCTAATTGGATGTTCGGGACGGGAAAAAAGGCCAAAGAAACGA
AGTTGGATCGAGTTAGGAGCTTATGGAATAGGGCAAGAAACTCGACTAGCGTTGAGACCCTCCAACCAGGGCGTCCCAACGCTCATATTTTTCCTTCTCTGATCAGACGG
CAAAAGGTCATAGCGTCCACAGCTTCGAGACGCTCTCGATTAATTTCTAAACAGAAGCTGCGTATCGCGACAACATTTTTGGCCGAAAACGCAAAGAAAAATCATCTTTG
GAAGCTGAAGCAAAGGGTGGAGAACGGGATTGAAAACTTTGTTCGTGGGGATCGTGACGGGGTCAGGACGACACTCGATTTCACGATCACTTTATTATTACTTGACTCGT
GCGCGAGCGGTAAGGAAAATTCCACATCAGGCAAGGAGAATAGTAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCTCAAGTGAGCTACAAAGAGATTTTCCA
GAAAATTGGTCCGGTTCAGCTGCTGCCTTTTGGTCCGGTTCGGTCTGCTGCAGTCTCTTTACACTCATTGCATGGCTAGTTCAGTGCTTGGATGGGCGGTTCGAGTCGGT
TCGTGAAGCTCGGGATTGCTACAAGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTTGTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGGAA
CAACGCAAACTCCAGAAATGGATAGGATTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCCCAGTCAGTTTTGGGGTCAAAACAACCAGTTAGGTGCGAAGAAGACTCGTCAACAACGACCCGCGCACGACTCGGAACGACCTCTGTTTTTTCAGAAATGCG
GTCGCATTTCAATTATGCCTTCCCAGAAATGCGGAATCATGTTTCGAAGTTAAATCGAGAAATTGGAGCTAATTGGATGTTCGGGACGGGAAAAAAGGCCAAAGAAACGA
AGTTGGATCGAGTTAGGAGCTTATGGAATAGGGCAAGAAACTCGACTAGCGTTGAGACCCTCCAACCAGGGCGTCCCAACGCTCATATTTTTCCTTCTCTGATCAGACGG
CAAAAGGTCATAGCGTCCACAGCTTCGAGACGCTCTCGATTAATTTCTAAACAGAAGCTGCGTATCGCGACAACATTTTTGGCCGAAAACGCAAAGAAAAATCATCTTTG
GAAGCTGAAGCAAAGGGTGGAGAACGGGATTGAAAACTTTGTTCGTGGGGATCGTGACGGGGTCAGGACGACACTCGATTTCACGATCACTTTATTATTACTTGACTCGT
GCGCGAGCGGTAAGGAAAATTCCACATCAGGCAAGGAGAATAGTAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCTCAAGTGAGCTACAAAGAGATTTTCCA
GAAAATTGGTCCGGTTCAGCTGCTGCCTTTTGGTCCGGTTCGGTCTGCTGCAGTCTCTTTACACTCATTGCATGGCTAGTTCAGTGCTTGGATGGGCGGTTCGAGTCGGT
TCGTGAAGCTCGGGATTGCTACAAGTTGCACCGTGAGATTTCCATGTTGCGCCTGCTTGTATGCCCTGGAGCTACTAACCATTCGGAGGGTTGTAACATGGAGATCGGAA
CAACGCAAACTCCAGAAATGGATAGGATTACTTAG
Protein sequenceShow/hide protein sequence
MVAQSVLGSKQPVRCEEDSSTTTRARLGTTSVFSEMRSHFNYAFPEMRNHVSKLNREIGANWMFGTGKKAKETKLDRVRSLWNRARNSTSVETLQPGRPNAHIFPSLIRR
QKVIASTASRRSRLISKQKLRIATTFLAENAKKNHLWKLKQRVENGIENFVRGDRDGVRTTLDFTITLLLLDSCASGKENSTSGKENSREVGEGKHHKEFLSSELQRDFP
ENWSGSAAAFWSGSVCCSLFTLIAWLVQCLDGRFESVREARDCYKLHREISMLRLLVCPGATNHSEGCNMEIGTTQTPEMDRIT